RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 KCNB2Q92953 911 aa10.68□□□□□ -0.7
YBX3-210ENST00000540975 WDR18Q9BV38 432 aa10.68□□□□□ -0.7
YBX3-210ENST00000540975 KRT82Q9NSB4 513 aa10.68□□□□□ -0.7
YBX3-210ENST00000540975 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
YBX3-210ENST00000540975 ADH5P11766 374 aa10.67□□□□□ -0.7
YBX3-210ENST00000540975 CLEC10AQ8IUN9 316 aa10.67□□□□□ -0.7
YBX3-210ENST00000540975 TTF2Q9UNY4 1162 aaKnown RBP10.67□□□□□ -0.7
YBX3-210ENST00000540975 HIF3AQ9Y2N7 669 aa10.67□□□□□ -0.7
YBX3-210ENST00000540975 ZNF862O60290 1169 aa10.66□□□□□ -0.7
YBX3-210ENST00000540975 SLFN14P0C7P3 912 aa10.66□□□□□ -0.7
YBX3-210ENST00000540975 ZNF252P-AS1Q0IIN9 211 aa10.66□□□□□ -0.7
YBX3-210ENST00000540975 SV2BQ7L1I2 683 aa10.66□□□□□ -0.7
YBX3-210ENST00000540975 CBX8Q9HC52 389 aa10.66□□□□□ -0.7
YBX3-210ENST00000540975 SAMM50Q9Y512 469 aa10.66□□□□□ -0.7
YBX3-210ENST00000540975 CELA3AP09093 270 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 CTSHP09668 335 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 USP11P51784 963 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 SGO2Q562F6 1265 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 ZNF326Q5BKZ1 582 aaKnown RBP10.65□□□□□ -0.7
YBX3-210ENST00000540975 BEND4Q6ZU67 534 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 GRIN3AQ8TCU5 1115 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 FAM83CQ9BQN1 747 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 KCNF1Q9H3M0 494 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 PPP1R9AQ9ULJ8 1098 aa10.65□□□□□ -0.7
YBX3-210ENST00000540975 SORBS3O60504 671 aa10.64□□□□□ -0.71
YBX3-210ENST00000540975 MAP4P27816 1152 aaKnown RBP10.64□□□□□ -0.71
YBX3-210ENST00000540975 KIF4BQ2VIQ3 1234 aa10.64□□□□□ -0.71
YBX3-210ENST00000540975 MAP1SQ66K74 1059 aaPredicted RBP10.64□□□□□ -0.71
YBX3-210ENST00000540975 CDPF1Q6NVV7 123 aa10.64□□□□□ -0.71
YBX3-210ENST00000540975 MPRIPQ6WCQ1 1025 aa10.64□□□□□ -0.71
YBX3-210ENST00000540975 DYMQ7RTS9 669 aa10.64□□□□□ -0.71
YBX3-210ENST00000540975 TRIM42Q8IWZ5 723 aa10.64□□□□□ -0.71
YBX3-210ENST00000540975 GIPC2Q8TF65 315 aa10.64□□□□□ -0.71
YBX3-210ENST00000540975 HMX2A2RU54 273 aa10.63□□□□□ -0.71
YBX3-210ENST00000540975 MEI1Q5TIA1 1274 aa10.63□□□□□ -0.71
YBX3-210ENST00000540975 RASIP1Q5U651 963 aa10.63□□□□□ -0.71
YBX3-210ENST00000540975 SLC51AQ86UW1 340 aa10.63□□□□□ -0.71
YBX3-210ENST00000540975 C7orf69Q9H7B7 122 aa10.63□□□□□ -0.71
YBX3-210ENST00000540975 CACNA2D2Q9NY47 1150 aa10.63□□□□□ -0.71
YBX3-210ENST00000540975 ACTL7BQ9Y614 415 aa10.63□□□□□ -0.71
YBX3-210ENST00000540975 FSTP19883 344 aa10.62□□□□□ -0.71
YBX3-210ENST00000540975 LRRC14Q15048 493 aa10.62□□□□□ -0.71
YBX3-210ENST00000540975 TAF1CQ15572 869 aaPredicted RBP10.62□□□□□ -0.71
YBX3-210ENST00000540975 FBLIM1Q8WUP2 373 aa10.62□□□□□ -0.71
YBX3-210ENST00000540975 GSX1Q9H4S2 264 aaPredicted RBP10.62□□□□□ -0.71
YBX3-210ENST00000540975 MRS2Q9HD23 443 aa10.62□□□□□ -0.71
YBX3-210ENST00000540975 CYP8B1Q9UNU6 501 aa10.62□□□□□ -0.71
YBX3-210ENST00000540975 AP4E1Q9UPM8 1137 aa10.62□□□□□ -0.71
YBX3-210ENST00000540975 USP31Q70CQ4 1352 aa10.62□□□□□ -0.71
YBX3-210ENST00000540975 RXRBP28702 533 aa10.61□□□□□ -0.71
YBX3-210ENST00000540975 ASPAP45381 313 aa10.61□□□□□ -0.71
YBX3-210ENST00000540975 CCDC85BQ15834 202 aaPredicted RBP10.61□□□□□ -0.71
YBX3-210ENST00000540975 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
YBX3-210ENST00000540975 GPBAR1Q8TDU6 330 aa10.61□□□□□ -0.71
YBX3-210ENST00000540975 CRIM1Q9NZV1 1036 aa10.61□□□□□ -0.71
YBX3-210ENST00000540975 PCDHGC5Q9Y5F6 944 aa10.61□□□□□ -0.71
YBX3-210ENST00000540975 TMPRSS2O15393 492 aa10.6□□□□□ -0.71
YBX3-210ENST00000540975 HNRNPUQ00839 825 aaKnown RBP eCLIP10.6□□□□□ -0.71
YBX3-210ENST00000540975 ID3Q02535 119 aa10.6□□□□□ -0.71
YBX3-210ENST00000540975 EZH1Q92800 747 aaPredicted RBP10.6□□□□□ -0.71
YBX3-210ENST00000540975 FAM105AQ9NUU6 356 aa10.6□□□□□ -0.71
YBX3-210ENST00000540975 FAM95CA0A1B0GW59 222 aa10.59□□□□□ -0.71
YBX3-210ENST00000540975 TRIM37O94972 964 aa10.59□□□□□ -0.71
YBX3-210ENST00000540975 RNF43Q68DV7 783 aa10.59□□□□□ -0.71
YBX3-210ENST00000540975 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
YBX3-210ENST00000540975 DISC1Q9NRI5 854 aa10.59□□□□□ -0.71
YBX3-210ENST00000540975 VTI1BQ9UEU0 232 aa10.59□□□□□ -0.71
YBX3-210ENST00000540975 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.58□□□□□ -0.72
YBX3-210ENST00000540975 IGLV1-40P01703 118 aa10.58□□□□□ -0.72
YBX3-210ENST00000540975 ZNF16P17020 682 aaPredicted RBP10.58□□□□□ -0.72
YBX3-210ENST00000540975 ITGAEP38570 1179 aa10.58□□□□□ -0.72
YBX3-210ENST00000540975 ST13P50502 369 aaKnown RBP10.58□□□□□ -0.72
YBX3-210ENST00000540975 ZC3H12AQ5D1E8 599 aaKnown RBP10.58□□□□□ -0.72
YBX3-210ENST00000540975 SCARA3Q6AZY7 606 aa10.58□□□□□ -0.72
YBX3-210ENST00000540975 TTBK2Q6IQ55 1244 aa10.58□□□□□ -0.72
YBX3-210ENST00000540975 FANCD2OSQ96PS1 177 aa10.58□□□□□ -0.72
YBX3-210ENST00000540975 YIPF2Q9BWQ6 316 aa10.58□□□□□ -0.72
YBX3-210ENST00000540975 GSC2O15499 205 aa10.57□□□□□ -0.72
YBX3-210ENST00000540975 NFICP08651 508 aa10.57□□□□□ -0.72
YBX3-210ENST00000540975 NFIAQ12857 509 aa10.57□□□□□ -0.72
YBX3-210ENST00000540975 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
YBX3-210ENST00000540975 ACSBG1Q96GR2 724 aa10.57□□□□□ -0.72
YBX3-210ENST00000540975 CRELD1Q96HD1 420 aa10.57□□□□□ -0.72
YBX3-210ENST00000540975 NOC4LQ9BVI4 516 aaKnown RBP10.57□□□□□ -0.72
YBX3-210ENST00000540975 ACSS3Q9H6R3 686 aa10.57□□□□□ -0.72
YBX3-210ENST00000540975 ATXN3LQ9H3M9 355 aa10.56□□□□□ -0.72
YBX3-210ENST00000540975 RAB6AP20340 208 aa10.55□□□□□ -0.72
YBX3-210ENST00000540975 PAOXQ6QHF9 649 aa10.55□□□□□ -0.72
YBX3-210ENST00000540975 SEMA6CQ9H3T2 930 aa10.55□□□□□ -0.72
YBX3-210ENST00000540975 RPS26P62854 115 aaKnown RBP10.54□□□□□ -0.72
YBX3-210ENST00000540975 PTPN11Q06124 597 aaPredicted RBP10.54□□□□□ -0.72
YBX3-210ENST00000540975 MAP7Q14244 749 aa10.54□□□□□ -0.72
YBX3-210ENST00000540975 MAP3K11Q16584 847 aa10.54□□□□□ -0.72
YBX3-210ENST00000540975 DBNDD2Q9BQY9 259 aa10.54□□□□□ -0.72
YBX3-210ENST00000540975 PCDHA4Q9UN74 947 aa10.54□□□□□ -0.72
YBX3-210ENST00000540975 RLBP1P12271 317 aa10.53□□□□□ -0.72
YBX3-210ENST00000540975 LIG3P49916 1009 aa10.53□□□□□ -0.72
YBX3-210ENST00000540975 ERVK-24P63145 666 aa10.53□□□□□ -0.72
YBX3-210ENST00000540975 MRPL58Q14197 206 aaKnown RBP10.53□□□□□ -0.72
YBX3-210ENST00000540975 AGMOQ6ZNB7 445 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms