RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 NPHP1O15259 732 aa13.21□□□□□ -0.3
LGR5-203ENST00000540815 BICD2Q8TD16 824 aa13.21□□□□□ -0.3
LGR5-203ENST00000540815 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.3
LGR5-203ENST00000540815 TIAM2Q8IVF5 1701 aa13.2□□□□□ -0.3
LGR5-203ENST00000540815 KDM4AO75164 1064 aa13.2□□□□□ -0.3
LGR5-203ENST00000540815 APPP05067 770 aa13.2□□□□□ -0.3
LGR5-203ENST00000540815 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
LGR5-203ENST00000540815 TAF1P21675 1872 aa13.2□□□□□ -0.3
LGR5-203ENST00000540815 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
LGR5-203ENST00000540815 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
LGR5-203ENST00000540815 SCN7AQ01118 1682 aa13.2□□□□□ -0.3
LGR5-203ENST00000540815 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
LGR5-203ENST00000540815 NR1I2O75469 434 aa13.19□□□□□ -0.3
LGR5-203ENST00000540815 TYRO3Q06418 890 aa13.19□□□□□ -0.3
LGR5-203ENST00000540815 CAMK4Q16566 473 aa13.19□□□□□ -0.3
LGR5-203ENST00000540815 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
LGR5-203ENST00000540815 C16orf45Q96MC5 204 aaPredicted RBP13.19□□□□□ -0.3
LGR5-203ENST00000540815 ANGEL1Q9UNK9 670 aaKnown RBP13.19□□□□□ -0.3
LGR5-203ENST00000540815 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
LGR5-203ENST00000540815 RGL2O15211 777 aa13.19□□□□□ -0.3
LGR5-203ENST00000540815 CHRNDQ07001 517 aa13.19□□□□□ -0.3
LGR5-203ENST00000540815 CYB5R4Q7L1T6 521 aa13.19□□□□□ -0.3
LGR5-203ENST00000540815 CDC5LQ99459 802 aaKnown RBP13.19□□□□□ -0.3
LGR5-203ENST00000540815 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
LGR5-203ENST00000540815 GTF2F1P35269 517 aaKnown RBP eCLIP13.18□□□□□ -0.32e-8■■■□□ 17.1
LGR5-203ENST00000540815 GUCY1B3Q02153 619 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 TMEM87BQ96K49 555 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 USP28Q96RU2 1077 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 WTIPA6NIX2 430 aaPredicted RBP13.18□□□□□ -0.3
LGR5-203ENST00000540815 CPLX1O14810 134 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 MBD4O95243 580 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 BCAMP50895 628 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 LRMPQ12912 555 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 IFNL3Q8IZI9 196 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 ZNF592Q92610 1267 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 C8orf76Q96K31 380 aa13.18□□□□□ -0.3
LGR5-203ENST00000540815 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
LGR5-203ENST00000540815 EPB41L4AQ9HCS5 686 aaPredicted RBP13.18□□□□□ -0.3
LGR5-203ENST00000540815 ORC3Q9UBD5 711 aaPredicted RBP13.18□□□□□ -0.3
LGR5-203ENST00000540815 TOM1O60784 492 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
LGR5-203ENST00000540815 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 NEDD4P46934 1319 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 PNPLA7Q6ZV29 1317 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 GNAT2P19087 354 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
LGR5-203ENST00000540815 SF3B3Q15393 1217 aaKnown RBP13.17□□□□□ -0.3
LGR5-203ENST00000540815 ERFEQ4G0M1 354 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 B4E1Z4 1266 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 VPS72Q15906 364 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 C8orf37Q96NL8 207 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 NAPBQ9H115 298 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 RTEL1Q9NZ71 1219 aa13.17□□□□□ -0.3
LGR5-203ENST00000540815 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
LGR5-203ENST00000540815 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 GSG1L2A8MUP6 293 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.3
LGR5-203ENST00000540815 BRAPQ7Z569 592 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 IGDCC4Q8TDY8 1250 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
LGR5-203ENST00000540815 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
LGR5-203ENST00000540815 ZNF804BA4D1E1 1349 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 CTAGE5O15320 804 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 CDKL5O76039 1030 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 SLFN14P0C7P3 912 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 PTGS1P23219 599 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 SGMS1Q86VZ5 419 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 LY9Q9HBG7 655 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 COL1A1P02452 1464 aaPredicted RBP13.15□□□□□ -0.3
LGR5-203ENST00000540815 ANO6Q4KMQ2 910 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 OTUD7BQ6GQQ9 843 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 LCORLQ8N3X6 602 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 KIAA1524Q8TCG1 905 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 ANKRD7Q92527 254 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
LGR5-203ENST00000540815 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
LGR5-203ENST00000540815 LIFRP42702 1097 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 KRT23Q9C075 422 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 GJB4Q9NTQ9 266 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 BTAF1O14981 1849 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 PRKAB2O43741 272 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 SNW1Q13573 536 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms