RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 TBC1D22AQ8WUA7 517 aa20.17■□□□□ 0.82
LTBR-207ENST00000539925 NBPF3Q9H094 633 aa20.17■□□□□ 0.82
LTBR-207ENST00000539925 ATP8A2Q9NTI2 1148 aa20.17■□□□□ 0.82
LTBR-207ENST00000539925 STK32BQ9NY57 414 aa20.17■□□□□ 0.82
LTBR-207ENST00000539925 RGS17Q9UGC6 210 aaPredicted RBP20.17■□□□□ 0.82
LTBR-207ENST00000539925 ATP6V0A2Q9Y487 856 aa20.17■□□□□ 0.82
LTBR-207ENST00000539925 MAST2Q6P0Q8 1798 aa20.17■□□□□ 0.82
LTBR-207ENST00000539925 LDHBP07195 334 aaKnown RBP20.16■□□□□ 0.82
LTBR-207ENST00000539925 MMP10P09238 476 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 SRGNP10124 158 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 IL1R1P14778 569 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 POTEAQ6S8J7 498 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 MASTLQ96GX5 879 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 PRPF40AO75400 957 aaKnown RBP20.16■□□□□ 0.82
LTBR-207ENST00000539925 LIFRP42702 1097 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 ANTXR2P58335 489 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 CPLX2Q6PUV4 134 aaKnown RBP20.16■□□□□ 0.82
LTBR-207ENST00000539925 TXNRD3Q86VQ6 643 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
LTBR-207ENST00000539925 VPS37CA5D8V6 355 aaPredicted RBP20.15■□□□□ 0.82
LTBR-207ENST00000539925 RCAN1P53805 252 aa20.15■□□□□ 0.82
LTBR-207ENST00000539925 PPARAQ07869 468 aa20.15■□□□□ 0.82
LTBR-207ENST00000539925 L1TD1Q5T7N2 865 aaKnown RBP20.15■□□□□ 0.82
LTBR-207ENST00000539925 FOXD4L5Q5VV16 416 aaPredicted RBP20.15■□□□□ 0.82
LTBR-207ENST00000539925 SGMS1Q86VZ5 419 aa20.15■□□□□ 0.82
LTBR-207ENST00000539925 NSUN7Q8NE18 718 aaKnown RBP20.15■□□□□ 0.82
LTBR-207ENST00000539925 FOXD4L4Q8WXT5 416 aaPredicted RBP20.15■□□□□ 0.82
LTBR-207ENST00000539925 NOL10Q9BSC4 688 aaKnown RBP20.15■□□□□ 0.82
LTBR-207ENST00000539925 CD209Q9NNX6 404 aa20.15■□□□□ 0.82
LTBR-207ENST00000539925 LRRC37AA6NMS7 1700 aa20.15■□□□□ 0.82
LTBR-207ENST00000539925 KLF18A0A0U1RQI7 1052 aa20.14■□□□□ 0.81
LTBR-207ENST00000539925 SH2B2O14492 632 aaPredicted RBP20.14■□□□□ 0.81
LTBR-207ENST00000539925 CDKL5O76039 1030 aa20.14■□□□□ 0.81
LTBR-207ENST00000539925 BAG3O95817 575 aa20.14■□□□□ 0.81
LTBR-207ENST00000539925 SLC3A2P08195 630 aaKnown RBP20.14■□□□□ 0.81
LTBR-207ENST00000539925 SLC15A2Q16348 729 aa20.14■□□□□ 0.81
LTBR-207ENST00000539925 ILDR1Q86SU0 546 aaPredicted RBP20.14■□□□□ 0.81
LTBR-207ENST00000539925 TBC1D16Q8TBP0 767 aa20.14■□□□□ 0.81
LTBR-207ENST00000539925 CAMKK2Q96RR4 588 aa20.14■□□□□ 0.81
LTBR-207ENST00000539925 ZSCAN16Q9H4T2 348 aaPredicted RBP20.14■□□□□ 0.81
LTBR-207ENST00000539925 ERICH2A1L162 156 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 PRKAB2O43741 272 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 ADGRA1Q86SQ6 560 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 NAP1L2Q9ULW6 460 aaPredicted RBP20.13■□□□□ 0.81
LTBR-207ENST00000539925 SUGT1Q9Y2Z0 365 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 PTPDC1A2A3K4 754 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 GOLGA8BA8MQT2 603 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 B4E1Z4 1266 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 H3BQV1 296 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 SF3B2Q13435 895 aaKnown RBP20.13■□□□□ 0.81
LTBR-207ENST00000539925 IFFO2Q5TF58 517 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 SYNE3Q6ZMZ3 975 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 CHST3Q7LGC8 479 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 ESR2Q92731 530 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 SYAP1Q96A49 352 aaPredicted RBP20.13■□□□□ 0.81
LTBR-207ENST00000539925 COA1Q9GZY4 146 aa20.13■□□□□ 0.81
LTBR-207ENST00000539925 CCDC88AQ3V6T2 1871 aa20.12■□□□□ 0.81
LTBR-207ENST00000539925 CPLX1O14810 134 aa20.12■□□□□ 0.81
LTBR-207ENST00000539925 PRDX5P30044 214 aa20.12■□□□□ 0.81
LTBR-207ENST00000539925 SBK1Q52WX2 424 aa20.12■□□□□ 0.81
LTBR-207ENST00000539925 STYK1Q6J9G0 422 aa20.12■□□□□ 0.81
LTBR-207ENST00000539925 KLHL34Q8N239 644 aa20.12■□□□□ 0.81
LTBR-207ENST00000539925 ARPP21Q9UBL0 812 aaPredicted RBP20.12■□□□□ 0.81
LTBR-207ENST00000539925 KIAA1551Q9HCM1 1747 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 NEDD4P46934 1319 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 C6orf229H3BNL8 230 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 PLCG2P16885 1265 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 BAG6P46379 1132 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 PPP4CP60510 307 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 KRT85P78386 507 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 PPP2R5BQ15173 497 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 TMEM67Q5HYA8 995 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 IGDCC4Q8TDY8 1250 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 ZNF384Q8TF68 577 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 FAM205AQ6ZU69 1335 aa20.11■□□□□ 0.81
LTBR-207ENST00000539925 IFIT3O14879 490 aaKnown RBP20.1■□□□□ 0.81
LTBR-207ENST00000539925 JAK2O60674 1132 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 FGRP09769 529 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 CCT2P78371 535 aaKnown RBP20.1■□□□□ 0.81
LTBR-207ENST00000539925 CTDSPL2Q05D32 466 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 ATL3Q6DD88 541 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 CYB5R4Q7L1T6 521 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 MPNDQ8N594 471 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 EYA3Q99504 573 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 ANKRD31Q8N7Z5 1873 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 KDM4AO75164 1064 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 AMOTL1Q8IY63 956 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 ZSWIM5Q9P217 1185 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 POLLQ9UGP5 575 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 BRPF3Q9ULD4 1205 aa20.1■□□□□ 0.81
LTBR-207ENST00000539925 NID2Q14112 1375 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 GOLGA6L3A6NEY3 463 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 CCDC69A6NI79 296 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 H0YIN7 160 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 ZBTB43O43298 467 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 CTDNEP1O95476 244 aa20.09■□□□□ 0.81
LTBR-207ENST00000539925 METAP2P50579 478 aaKnown RBP eCLIP20.09■□□□□ 0.81
LTBR-207ENST00000539925 DYNLL1P63167 89 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 459.5 ms