RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 KIAA1468Q9P260 1216 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 FOXN1O15353 648 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 SKILP12757 684 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 LMOD1P29536 600 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-210ENST00000539599 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.21
UBE3B-210ENST00000539599 KCNQ4P56696 695 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 FAM217BQ9NTX9 383 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-210ENST00000539599 KCNJ14Q9UNX9 436 aa16.34■□□□□ 0.21
UBE3B-210ENST00000539599 CTAGE5O15320 804 aa16.33■□□□□ 0.21
UBE3B-210ENST00000539599 GRIN1Q05586 938 aa16.33■□□□□ 0.21
UBE3B-210ENST00000539599 CHAF1AQ13111 956 aaPredicted RBP16.33■□□□□ 0.21
UBE3B-210ENST00000539599 PNOCQ13519 176 aa16.33■□□□□ 0.21
UBE3B-210ENST00000539599 PPP4R3BQ5MIZ7 849 aa16.33■□□□□ 0.21
UBE3B-210ENST00000539599 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.21
UBE3B-210ENST00000539599 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.21
UBE3B-210ENST00000539599 XPO4Q9C0E2 1151 aaKnown RBP16.33■□□□□ 0.21
UBE3B-210ENST00000539599 IFNKQ9P0W0 207 aa16.33■□□□□ 0.21
UBE3B-210ENST00000539599 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.21
UBE3B-210ENST00000539599 MYH7P12883 1935 aa16.33■□□□□ 0.21
UBE3B-210ENST00000539599 ATP2B1P20020 1258 aa16.33■□□□□ 0.2
UBE3B-210ENST00000539599 CCZ1BP86790 482 aa16.33■□□□□ 0.2
UBE3B-210ENST00000539599 CCZ1P86791 482 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-210ENST00000539599 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
UBE3B-210ENST00000539599 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.2
UBE3B-210ENST00000539599 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
UBE3B-210ENST00000539599 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-210ENST00000539599 LCORLQ8N3X6 602 aa16.33■□□□□ 0.2
UBE3B-210ENST00000539599 SHC4Q6S5L8 630 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 LY9Q9HBG7 655 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 hCG_1642624A0A1W2PR95 340 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 SLC3A2P08195 630 aaKnown RBP16.32■□□□□ 0.2
UBE3B-210ENST00000539599 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.24e-7■■■□□ 17.3
UBE3B-210ENST00000539599 SPATA5Q8NB90 893 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 ITGB4P16144 1822 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 SPEF2Q9C093 1822 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 ABCA3Q99758 1704 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 GOLGA8AA7E2F4 631 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 DHX16O60231 1041 aaKnown RBP16.32■□□□□ 0.2
UBE3B-210ENST00000539599 PDE8AO60658 829 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 SARM1Q6SZW1 724 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 TMC6Q7Z403 805 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 KCNG4Q8TDN1 519 aa16.32■□□□□ 0.2
UBE3B-210ENST00000539599 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 CDHR2Q9BYE9 1310 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 COL4A1P02462 1669 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 ZBTB43O43298 467 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 EVX2Q03828 476 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 FBXL16Q8N461 479 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 MRFAP1L1Q96HT8 127 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
UBE3B-210ENST00000539599 NTRK3Q16288 839 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 SDR42E1Q8WUS8 393 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 DPF2Q92785 391 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 NAPBQ9H115 298 aa16.31■□□□□ 0.2
UBE3B-210ENST00000539599 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
UBE3B-210ENST00000539599 BCL9O00512 1426 aa16.3■□□□□ 0.2
UBE3B-210ENST00000539599 A0A1W2PQ27 194 aa16.3■□□□□ 0.2
UBE3B-210ENST00000539599 A0A1W2PQ64 194 aa16.3■□□□□ 0.2
UBE3B-210ENST00000539599 A0A1W2PQD8 194 aa16.3■□□□□ 0.2
UBE3B-210ENST00000539599 BTBD18B2RXH4 712 aa16.3■□□□□ 0.2
UBE3B-210ENST00000539599 NPHP1O15259 732 aa16.3■□□□□ 0.2
UBE3B-210ENST00000539599 YEATS4O95619 227 aa16.3■□□□□ 0.2
UBE3B-210ENST00000539599 PUM3Q15397 648 aaKnown RBP16.3■□□□□ 0.2
UBE3B-210ENST00000539599 ZRSR1Q15695 479 aaKnown RBP16.3■□□□□ 0.2
UBE3B-210ENST00000539599 TEX13AQ9BXU3 409 aaPredicted RBP16.3■□□□□ 0.2
UBE3B-210ENST00000539599 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
UBE3B-210ENST00000539599 FGFR2P21802 821 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 ARID4AP29374 1257 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-210ENST00000539599 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
UBE3B-210ENST00000539599 NCAPHQ15003 741 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 UBE3CQ15386 1083 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 GRAMD1CQ8IYS0 662 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 CHMP4CQ96CF2 233 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 PLEKHG2Q9H7P9 1386 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 GSG1L2A8MUP6 293 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 CDC25BP30305 580 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 SYKP43405 635 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 NR5A1Q13285 461 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 ATL3Q6DD88 541 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 ARMCX5Q6P1M9 558 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 NUP133Q8WUM0 1156 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 LPIN2Q92539 896 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 MPHOSPH8Q99549 860 aa16.29■□□□□ 0.2
UBE3B-210ENST00000539599 NUP98P52948 1817 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 PTPAQ15257 358 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 LONRF3Q496Y0 759 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 CEP135Q66GS9 1140 aa16.28■□□□□ 0.2
UBE3B-210ENST00000539599 FOXP4Q8IVH2 680 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-210ENST00000539599 HSD3B7Q9H2F3 369 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms