RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 TRIM42Q8IWZ5 723 aa10.51□□□□□ -0.73
TRAV11-201ENST00000539512 RUSC1Q9BVN2 902 aa10.51□□□□□ -0.73
TRAV11-201ENST00000539512 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
TRAV11-201ENST00000539512 KRT82Q9NSB4 513 aa10.51□□□□□ -0.73
TRAV11-201ENST00000539512 USP21Q9UK80 565 aa10.51□□□□□ -0.73
TRAV11-201ENST00000539512 LOC100289279A0A1B0GTE1 492 aa10.5□□□□□ -0.73
TRAV11-201ENST00000539512 RNF225M0QZC1 329 aaPredicted RBP10.5□□□□□ -0.73
TRAV11-201ENST00000539512 RACK1P63244 317 aaKnown RBP10.5□□□□□ -0.73
TRAV11-201ENST00000539512 SEPT6Q14141 434 aa10.5□□□□□ -0.73
TRAV11-201ENST00000539512 CCDC84Q86UT8 332 aaPredicted RBP10.5□□□□□ -0.73
TRAV11-201ENST00000539512 VPS37DQ86XT2 251 aa10.5□□□□□ -0.73
TRAV11-201ENST00000539512 UBASH3BQ8TF42 649 aa10.5□□□□□ -0.73
TRAV11-201ENST00000539512 ZNF296Q8WUU4 475 aaPredicted RBP10.5□□□□□ -0.73
TRAV11-201ENST00000539512 RHOVQ96L33 236 aa10.5□□□□□ -0.73
TRAV11-201ENST00000539512 C8orf37Q96NL8 207 aa10.5□□□□□ -0.73
TRAV11-201ENST00000539512 ADAM11O75078 769 aa10.49□□□□□ -0.73
TRAV11-201ENST00000539512 SLFN14P0C7P3 912 aa10.49□□□□□ -0.73
TRAV11-201ENST00000539512 LORP23490 312 aaPredicted RBP10.49□□□□□ -0.73
TRAV11-201ENST00000539512 NAALADL2Q58DX5 795 aa10.49□□□□□ -0.73
TRAV11-201ENST00000539512 ILDR2Q71H61 639 aa10.49□□□□□ -0.73
TRAV11-201ENST00000539512 PDZD3Q86UT5 571 aa10.49□□□□□ -0.73
TRAV11-201ENST00000539512 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
TRAV11-201ENST00000539512 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
TRAV11-201ENST00000539512 PCDHB5Q9Y5E4 795 aa10.49□□□□□ -0.73
TRAV11-201ENST00000539512 ZNF252P-AS1Q0IIN9 211 aa10.48□□□□□ -0.73
TRAV11-201ENST00000539512 PAK2Q13177 524 aa10.48□□□□□ -0.73
TRAV11-201ENST00000539512 NUTM2GQ5VZR2 741 aa10.48□□□□□ -0.73
TRAV11-201ENST00000539512 ALYREFQ86V81 257 aaKnown RBP10.48□□□□□ -0.73
TRAV11-201ENST00000539512 GPRASP2Q96D09 838 aa10.48□□□□□ -0.73
TRAV11-201ENST00000539512 SPATA32Q96LK8 384 aa10.48□□□□□ -0.73
TRAV11-201ENST00000539512 RNF208Q9H0X6 261 aa10.48□□□□□ -0.73
TRAV11-201ENST00000539512 CCDC86Q9H6F5 360 aaKnown RBP10.48□□□□□ -0.73
TRAV11-201ENST00000539512 ADAMTS1Q9UHI8 967 aa10.48□□□□□ -0.73
TRAV11-201ENST00000539512 ECEL1O95672 775 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 APOBRQ0VD83 1088 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 GRIK4Q16099 956 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 EXOSC6Q5RKV6 272 aaKnown RBP10.47□□□□□ -0.73
TRAV11-201ENST00000539512 RASIP1Q5U651 963 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 FDX2Q6P4F2 183 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 GPBAR1Q8TDU6 330 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 NRSN2Q9GZP1 204 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 CYP4F12Q9HCS2 524 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 PICK1Q9NRD5 415 aa10.47□□□□□ -0.73
TRAV11-201ENST00000539512 LIG1P18858 919 aa10.46□□□□□ -0.73
TRAV11-201ENST00000539512 NRG1Q02297 640 aaPredicted RBP10.46□□□□□ -0.73
TRAV11-201ENST00000539512 FBXL19Q6PCT2 694 aa10.46□□□□□ -0.73
TRAV11-201ENST00000539512 ELMO3Q96BJ8 720 aa10.46□□□□□ -0.73
TRAV11-201ENST00000539512 C9orf172C9J069 976 aa10.45□□□□□ -0.74
TRAV11-201ENST00000539512 TNNI2P48788 182 aa10.45□□□□□ -0.74
TRAV11-201ENST00000539512 CWF19L2Q2TBE0 894 aaKnown RBP10.45□□□□□ -0.74
TRAV11-201ENST00000539512 BNC2Q6ZN30 1099 aaPredicted RBP10.45□□□□□ -0.74
TRAV11-201ENST00000539512 FAM196AQ6ZSG2 479 aa10.45□□□□□ -0.74
TRAV11-201ENST00000539512 GATAD2BQ8WXI9 593 aa10.45□□□□□ -0.74
TRAV11-201ENST00000539512 ROBO2Q9HCK4 1378 aa10.44□□□□□ -0.74
TRAV11-201ENST00000539512 F13A1P00488 732 aa10.44□□□□□ -0.74
TRAV11-201ENST00000539512 AKAP4Q5JQC9 854 aa10.44□□□□□ -0.74
TRAV11-201ENST00000539512 HDXQ7Z353 690 aa10.44□□□□□ -0.74
TRAV11-201ENST00000539512 NT5C1AQ9BXI3 368 aa10.44□□□□□ -0.74
TRAV11-201ENST00000539512 TM4SF5O14894 197 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 TLR3O15455 904 aaKnown RBP10.43□□□□□ -0.74
TRAV11-201ENST00000539512 SART1O43290 800 aaKnown RBP10.43□□□□□ -0.74
TRAV11-201ENST00000539512 AOC2O75106 756 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 WISP1O95388 367 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 SF3A1Q15459 793 aaKnown RBP10.43□□□□□ -0.74
TRAV11-201ENST00000539512 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 NKD1Q969G9 470 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 GAL3ST3Q96A11 431 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 AKTIPQ9H8T0 292 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 UBP1Q9NZI7 540 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 AP4E1Q9UPM8 1137 aa10.43□□□□□ -0.74
TRAV11-201ENST00000539512 CTSBP07858 339 aa10.42□□□□□ -0.74
TRAV11-201ENST00000539512 ARID5AQ03989 594 aa10.42□□□□□ -0.74
TRAV11-201ENST00000539512 MPP2Q14168 576 aa10.42□□□□□ -0.74
TRAV11-201ENST00000539512 KIF4BQ2VIQ3 1234 aa10.42□□□□□ -0.74
TRAV11-201ENST00000539512 MPRIPQ6WCQ1 1025 aa10.42□□□□□ -0.74
TRAV11-201ENST00000539512 KIAA1211Q6ZU35 1233 aa10.42□□□□□ -0.74
TRAV11-201ENST00000539512 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.42□□□□□ -0.74
TRAV11-201ENST00000539512 C12orf50Q8NA57 414 aaPredicted RBP10.42□□□□□ -0.74
TRAV11-201ENST00000539512 LENG1Q96BZ8 264 aaPredicted RBP10.42□□□□□ -0.74
TRAV11-201ENST00000539512 KCNQ5Q9NR82 932 aa10.42□□□□□ -0.74
TRAV11-201ENST00000539512 STK17AQ9UEE5 414 aa10.42□□□□□ -0.74
TRAV11-201ENST00000539512 MEGF11A6BM72 1044 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 F8W735 103 aaPredicted RBP10.41□□□□□ -0.74
TRAV11-201ENST00000539512 ZNF862O60290 1169 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 GREM1O60565 184 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 GLB1P16278 677 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 DNAJA1P31689 397 aaKnown RBP10.41□□□□□ -0.74
TRAV11-201ENST00000539512 MCM4P33991 863 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 ID3Q02535 119 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 RPL6Q02878 288 aaKnown RBP10.41□□□□□ -0.74
TRAV11-201ENST00000539512 SEZ6Q53EL9 994 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 WIPI1Q5MNZ9 446 aaPredicted RBP10.41□□□□□ -0.74
TRAV11-201ENST00000539512 ANKRD34AQ69YU3 496 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 TINF2Q9BSI4 451 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 WDR18Q9BV38 432 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 TMPRSS13Q9BYE2 586 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 CEP41Q9BYV8 373 aa10.41□□□□□ -0.74
TRAV11-201ENST00000539512 DLGAP3O95886 979 aa10.4□□□□□ -0.74
TRAV11-201ENST00000539512 GARTP22102 1010 aa10.4□□□□□ -0.74
TRAV11-201ENST00000539512 GJA8P48165 433 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms