RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 AATFQ9NY61 560 aaKnown RBP eCLIP12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 COL4A5P29400 1685 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-211ENST00000538363 PSMD14O00487 310 aa12.72□□□□□ -0.37
TNFRSF1A-211ENST00000538363 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-211ENST00000538363 NAPBQ9H115 298 aa12.72□□□□□ -0.37
TNFRSF1A-211ENST00000538363 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
TNFRSF1A-211ENST00000538363 RBM8AQ9Y5S9 174 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-211ENST00000538363 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-211ENST00000538363 ZNF646O15015 1829 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF1A-211ENST00000538363 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 EPB41L2O43491 1005 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 BTDP43251 543 aa12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 PTH1RQ03431 593 aa12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 IMMTQ16891 758 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 DACT2Q5SW24 774 aa12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 ZNF589Q86UQ0 364 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 STRBPQ96SI9 672 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 DSCC1Q9BVC3 393 aa12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 LSG1Q9H089 658 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 TMOD2Q9NZR1 351 aa12.71□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MROH7-TTC4A0A0A0MT08 1334 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 PSME4Q14997 1843 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 TCRBV5S4A2TA0A5A2 114 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 YDJCA8MPS7 323 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ZNF213O14771 459 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 HSPD1P10809 573 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 CXCL9Q07325 125 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 TEX11Q8IYF3 940 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 LCORLQ8N3X6 602 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 USP40Q9NVE5 1235 aa12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 RBM19Q9Y4C8 960 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-211ENST00000538363 DOCK2Q92608 1830 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MINDY4BA8MYZ0 360 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MYO1BO43795 1136 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 VIL1P09327 827 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 CRKP46108 304 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 KRT32Q14532 448 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 GRIK5Q16478 980 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 AGBL3Q8NEM8 1001 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MAP4K1Q92918 833 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 TBC1D32Q96NH3 1257 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MYH2Q9UKX2 1941 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 H7C1D1 291 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 RPS12P25398 132 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 PSMA5P28066 241 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 LMOD1P29536 600 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 HSPA4P34932 840 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 FGD1P98174 961 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 TRDNQ13061 729 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 CFAP100Q494V2 611 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 HHIPL2Q6UWX4 724 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ADGRA1Q86SQ6 560 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 IFNL3Q8IZI9 196 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 CERS5Q8N5B7 392 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 IL25Q9H293 177 aa12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 RPAP1Q9BWH6 1393 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MAST2Q6P0Q8 1798 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 PRKAB2O43741 272 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 PRELPP51888 382 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 PICALMQ13492 652 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 BECN1Q14457 450 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 VPS53Q5VIR6 699 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 SH3RF3Q8TEJ3 882 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 TGFBRAP1Q8WUH2 860 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 SDR42E1Q8WUS8 393 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 TRIM34Q9BYJ4 488 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ATP8A2Q9NTI2 1148 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 SERPINA10Q9UK55 444 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 DAGLAQ9Y4D2 1042 aa12.67□□□□□ -0.38
TNFRSF1A-211ENST00000538363 SLC27A2O14975 620 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ST18O60284 1047 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 FGAP02671 866 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MMP14P50281 582 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ANAPC15P60006 121 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 PPP4CP60510 307 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 HAND2P61296 217 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 RABEP1Q15276 862 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 MAPKAPK5Q8IW41 473 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 ZSCAN29Q8IWY8 852 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 STK11IPQ8N1F8 1099 aa12.66□□□□□ -0.38
TNFRSF1A-211ENST00000538363 JAKMIP1Q96N16 626 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms