RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 IFFO2Q5TF58 517 aa10.8□□□□□ -0.68
LINC00943-203ENST00000535544 MICU3Q86XE3 530 aa10.8□□□□□ -0.68
LINC00943-203ENST00000535544 IGDCC4Q8TDY8 1250 aa10.8□□□□□ -0.68
LINC00943-203ENST00000535544 POLR3DP05423 398 aaPredicted RBP10.79□□□□□ -0.68
LINC00943-203ENST00000535544 UBE4AQ14139 1066 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 LRSAM1Q6UWE0 723 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 KRT27Q7Z3Y8 459 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 FBXO33Q7Z6M2 555 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 TMEM87AQ8NBN3 555 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 ZNF274Q96GC6 653 aaPredicted RBP10.79□□□□□ -0.68
LINC00943-203ENST00000535544 SCN7AQ01118 1682 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 A0A087WWV3 80 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 TDO2P48775 406 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 DDR1Q08345 913 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 RIOK1Q9BRS2 568 aaKnown RBP10.79□□□□□ -0.68
LINC00943-203ENST00000535544 AATFQ9NY61 560 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC00943-203ENST00000535544 ANKIB1Q9P2G1 1089 aa10.79□□□□□ -0.68
LINC00943-203ENST00000535544 CACNA1SQ13698 1873 aa10.78□□□□□ -0.68
LINC00943-203ENST00000535544 UBE2HP62256 183 aa10.78□□□□□ -0.68
LINC00943-203ENST00000535544 MECOMQ03112 1051 aa10.78□□□□□ -0.68
LINC00943-203ENST00000535544 CAVIN4Q5BKX8 364 aa10.78□□□□□ -0.68
LINC00943-203ENST00000535544 CNBD1Q8NA66 436 aa10.78□□□□□ -0.68
LINC00943-203ENST00000535544 LEO1Q8WVC0 666 aaPredicted RBP10.78□□□□□ -0.68
LINC00943-203ENST00000535544 NYXQ9GZU5 481 aa10.78□□□□□ -0.68
LINC00943-203ENST00000535544 FAM217BQ9NTX9 383 aaPredicted RBP10.78□□□□□ -0.68
LINC00943-203ENST00000535544 KIF28PB7ZC32 967 aa10.78□□□□□ -0.68
LINC00943-203ENST00000535544 LY9Q9HBG7 655 aa10.78□□□□□ -0.68
LINC00943-203ENST00000535544 SH2B2O14492 632 aaPredicted RBP10.77□□□□□ -0.68
LINC00943-203ENST00000535544 MBD3O95983 291 aa10.77□□□□□ -0.68
LINC00943-203ENST00000535544 SERPINB2P05120 415 aa10.77□□□□□ -0.68
LINC00943-203ENST00000535544 CYP2D6P10635 497 aa10.77□□□□□ -0.68
LINC00943-203ENST00000535544 HIBADHP31937 336 aaKnown RBP10.77□□□□□ -0.68
LINC00943-203ENST00000535544 GUCY1A2P33402 732 aa10.77□□□□□ -0.68
LINC00943-203ENST00000535544 EVCP57679 992 aa10.77□□□□□ -0.68
LINC00943-203ENST00000535544 DIXDC1Q155Q3 683 aa10.77□□□□□ -0.68
LINC00943-203ENST00000535544 ZNF827Q17R98 1081 aa10.77□□□□□ -0.68
LINC00943-203ENST00000535544 NSUN4Q96CB9 384 aaKnown RBP10.77□□□□□ -0.68
LINC00943-203ENST00000535544 USP28Q96RU2 1077 aa10.77□□□□□ -0.68
LINC00943-203ENST00000535544 ZNF831Q5JPB2 1677 aa10.77□□□□□ -0.69
LINC00943-203ENST00000535544 NMT2O60551 498 aa10.77□□□□□ -0.69
LINC00943-203ENST00000535544 TXNRD1Q16881 649 aa10.77□□□□□ -0.69
LINC00943-203ENST00000535544 ERCC4Q92889 916 aaPredicted RBP10.77□□□□□ -0.69
LINC00943-203ENST00000535544 SPATA32Q96LK8 384 aa10.77□□□□□ -0.69
LINC00943-203ENST00000535544 CHD4Q14839 1912 aa10.77□□□□□ -0.69
LINC00943-203ENST00000535544 MAGEB6P1A0A0J9YX57 407 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 hCG_1642624A0A1W2PR95 340 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 RANBP6O60518 1105 aaKnown RBP10.76□□□□□ -0.69
LINC00943-203ENST00000535544 NR1I2O75469 434 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 PDCP20941 246 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 TRDNQ13061 729 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 APOA5Q6Q788 366 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 CKAP2LQ8IYA6 745 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 ORC3Q9UBD5 711 aaPredicted RBP10.76□□□□□ -0.69
LINC00943-203ENST00000535544 ANGEL1Q9UNK9 670 aaKnown RBP10.76□□□□□ -0.69
LINC00943-203ENST00000535544 IRS2Q9Y4H2 1338 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 UBR3Q6ZT12 1888 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 KRT85P78386 507 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 GPSM2P81274 684 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 TMEM67Q5HYA8 995 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 AKNAD1Q5T1N1 836 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 TICAM2Q86XR7 235 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 IFIT3O14879 490 aaKnown RBP10.76□□□□□ -0.69
LINC00943-203ENST00000535544 MSL1Q68DK7 614 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 NAA16Q6N069 864 aaPredicted RBP10.76□□□□□ -0.69
LINC00943-203ENST00000535544 MFSD6Q6ZSS7 791 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 DACT1Q9NYF0 836 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 ATP6V1DQ9Y5K8 247 aa10.76□□□□□ -0.69
LINC00943-203ENST00000535544 USP17L12C9JPN9 530 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 USP17L21D6R901 530 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 PPARAQ07869 468 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 ALX1Q15699 326 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 NFXL1Q6ZNB6 911 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 COL24A1Q17RW2 1714 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 NTRK3Q16288 839 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 FBXL16Q8N461 479 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 LLPHQ9BRT6 129 aaKnown RBP10.75□□□□□ -0.69
LINC00943-203ENST00000535544 CLIC4Q9Y696 253 aa10.75□□□□□ -0.69
LINC00943-203ENST00000535544 PCNTO95613 3336 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 CPLX1O14810 134 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 METAP2P50579 478 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC00943-203ENST00000535544 GRAPQ13588 217 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 FAM47AQ5JRC9 791 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 GRAPLQ8TC17 118 aaPredicted RBP10.74□□□□□ -0.69
LINC00943-203ENST00000535544 GOLPH3LQ9H4A5 285 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 GNL3LQ9NVN8 582 aaKnown RBP10.74□□□□□ -0.69
LINC00943-203ENST00000535544 POLLQ9UGP5 575 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 AP5Z1O43299 807 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 CTR9Q6PD62 1173 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 COL23A1Q86Y22 540 aaPredicted RBP10.74□□□□□ -0.69
LINC00943-203ENST00000535544 PNPLA7Q6ZV29 1317 aa10.74□□□□□ -0.69
LINC00943-203ENST00000535544 POLRMTO00411 1230 aaKnown RBP10.73□□□□□ -0.69
LINC00943-203ENST00000535544 USP17L8P0C7I0 530 aa10.73□□□□□ -0.69
LINC00943-203ENST00000535544 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
LINC00943-203ENST00000535544 NUP133Q8WUM0 1156 aa10.73□□□□□ -0.69
LINC00943-203ENST00000535544 SHISA4Q96DD7 197 aa10.73□□□□□ -0.69
LINC00943-203ENST00000535544 MXD3Q9BW11 206 aa10.73□□□□□ -0.69
LINC00943-203ENST00000535544 TSPY26PQ9H489 355 aa10.73□□□□□ -0.69
LINC00943-203ENST00000535544 RIMBP2O15034 1052 aa10.73□□□□□ -0.69
LINC00943-203ENST00000535544 APBA3O96018 575 aa10.73□□□□□ -0.69
LINC00943-203ENST00000535544 VEGFAP15692 232 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms