RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 RELL1Q8IUW5 271 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 PHC3Q8NDX5 983 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 WDR89Q96FK6 387 aaPredicted RBP10.61□□□□□ -0.71
CASP4-213ENST00000534356 KRTAP4-6Q9BYQ5 205 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 AKTIPQ9H8T0 292 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 IGSF5Q9NSI5 407 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 KBTBD4Q9NVX7 518 aa10.61□□□□□ -0.71
CASP4-213ENST00000534356 C1QTNF9BB2RNN3 333 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 ZNF862O60290 1169 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 LIG1P18858 919 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 TFE3P19532 575 aaPredicted RBP10.6□□□□□ -0.71
CASP4-213ENST00000534356 NOS3P29474 1203 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 EXOSC6Q5RKV6 272 aaKnown RBP10.6□□□□□ -0.71
CASP4-213ENST00000534356 WFDC12Q8WWY7 111 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 TMEM74Q96NL1 305 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 TMPRSS13Q9BYE2 586 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 RNF208Q9H0X6 261 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 PCDHB5Q9Y5E4 795 aa10.6□□□□□ -0.71
CASP4-213ENST00000534356 MEGF11A6BM72 1044 aa10.59□□□□□ -0.71
CASP4-213ENST00000534356 MINDY4BA8MYZ0 360 aa10.59□□□□□ -0.71
CASP4-213ENST00000534356 GDF11O95390 407 aa10.59□□□□□ -0.71
CASP4-213ENST00000534356 GBP2P32456 591 aaPredicted RBP10.59□□□□□ -0.71
CASP4-213ENST00000534356 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
CASP4-213ENST00000534356 KRT82Q9NSB4 513 aa10.59□□□□□ -0.71
CASP4-213ENST00000534356 CACNA2D2Q9NY47 1150 aa10.59□□□□□ -0.71
CASP4-213ENST00000534356 PWP1Q13610 501 aa10.58□□□□□ -0.72
CASP4-213ENST00000534356 ZNF394Q53GI3 561 aa10.58□□□□□ -0.72
CASP4-213ENST00000534356 GPBAR1Q8TDU6 330 aa10.58□□□□□ -0.72
CASP4-213ENST00000534356 RHOVQ96L33 236 aa10.58□□□□□ -0.72
CASP4-213ENST00000534356 TRIM37O94972 964 aa10.57□□□□□ -0.72
CASP4-213ENST00000534356 PF4P02776 101 aa10.57□□□□□ -0.72
CASP4-213ENST00000534356 PTPN11Q06124 597 aaPredicted RBP10.57□□□□□ -0.72
CASP4-213ENST00000534356 HP1BP3Q5SSJ5 553 aaPredicted RBP10.57□□□□□ -0.72
CASP4-213ENST00000534356 NUTM2GQ5VZR2 741 aa10.57□□□□□ -0.72
CASP4-213ENST00000534356 NT5DC4Q86YG4 428 aa10.57□□□□□ -0.72
CASP4-213ENST00000534356 TMEM151AQ8N4L1 468 aa10.57□□□□□ -0.72
CASP4-213ENST00000534356 WDR18Q9BV38 432 aa10.57□□□□□ -0.72
CASP4-213ENST00000534356 PCDHGB7Q9Y5F8 929 aa10.57□□□□□ -0.72
CASP4-213ENST00000534356 AOC2O75106 756 aa10.56□□□□□ -0.72
CASP4-213ENST00000534356 ITGB2P05107 769 aa10.56□□□□□ -0.72
CASP4-213ENST00000534356 LMNB1P20700 586 aa10.56□□□□□ -0.72
CASP4-213ENST00000534356 CAMK2GQ13555 558 aaPredicted RBP10.56□□□□□ -0.72
CASP4-213ENST00000534356 SEPT6Q14141 434 aa10.56□□□□□ -0.72
CASP4-213ENST00000534356 USP48Q86UV5 1035 aa10.56□□□□□ -0.72
CASP4-213ENST00000534356 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
CASP4-213ENST00000534356 GAL3ST3Q96A11 431 aa10.56□□□□□ -0.72
CASP4-213ENST00000534356 RAD18Q9NS91 495 aa10.56□□□□□ -0.72
CASP4-213ENST00000534356 RACK1P63244 317 aaKnown RBP10.55□□□□□ -0.72
CASP4-213ENST00000534356 LMNB2Q03252 620 aa10.55□□□□□ -0.72
CASP4-213ENST00000534356 FAM160A1Q05DH4 1040 aa10.55□□□□□ -0.72
CASP4-213ENST00000534356 KIF4BQ2VIQ3 1234 aa10.55□□□□□ -0.72
CASP4-213ENST00000534356 SCARA3Q6AZY7 606 aa10.55□□□□□ -0.72
CASP4-213ENST00000534356 Q6ZS46 218 aa10.55□□□□□ -0.72
CASP4-213ENST00000534356 SMG8Q8ND04 991 aaKnown RBP10.55□□□□□ -0.72
CASP4-213ENST00000534356 ACSBG1Q96GR2 724 aa10.55□□□□□ -0.72
CASP4-213ENST00000534356 SUGCTQ9HAC7 445 aa10.55□□□□□ -0.72
CASP4-213ENST00000534356 GLB1P16278 677 aa10.54□□□□□ -0.72
CASP4-213ENST00000534356 PLA2G4EQ3MJ16 856 aa10.54□□□□□ -0.72
CASP4-213ENST00000534356 AKAP4Q5JQC9 854 aa10.54□□□□□ -0.72
CASP4-213ENST00000534356 TRIM42Q8IWZ5 723 aa10.54□□□□□ -0.72
CASP4-213ENST00000534356 C12orf50Q8NA57 414 aaPredicted RBP10.54□□□□□ -0.72
CASP4-213ENST00000534356 MIR1-1HGQ9H1L0 117 aa10.54□□□□□ -0.72
CASP4-213ENST00000534356 CYP4F12Q9HCS2 524 aa10.54□□□□□ -0.72
CASP4-213ENST00000534356 DDX41Q9UJV9 622 aaKnown RBP10.54□□□□□ -0.72
CASP4-213ENST00000534356 TIAF1O95411 115 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 DRD2P14416 443 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 ANKRD34AQ69YU3 496 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 FDX2Q6P4F2 183 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 JARID2Q92833 1246 aaPredicted RBP10.53□□□□□ -0.72
CASP4-213ENST00000534356 MEGF10Q96KG7 1140 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 UBL7Q96S82 380 aaPredicted RBP10.53□□□□□ -0.72
CASP4-213ENST00000534356 ADAMTS1Q9UHI8 967 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 PCDHA4Q9UN74 947 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 PCDHGC5Q9Y5F6 944 aa10.53□□□□□ -0.72
CASP4-213ENST00000534356 GARTP22102 1010 aa10.52□□□□□ -0.73
CASP4-213ENST00000534356 EIF4A3P38919 411 aaKnown RBP10.52□□□□□ -0.73
CASP4-213ENST00000534356 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.52□□□□□ -0.73
CASP4-213ENST00000534356 SLFN14P0C7P3 912 aa10.51□□□□□ -0.73
CASP4-213ENST00000534356 ADH5P11766 374 aa10.51□□□□□ -0.73
CASP4-213ENST00000534356 PREPP48147 710 aa10.51□□□□□ -0.73
CASP4-213ENST00000534356 SOX4Q06945 474 aaPredicted RBP10.51□□□□□ -0.73
CASP4-213ENST00000534356 FBXL19Q6PCT2 694 aa10.51□□□□□ -0.73
CASP4-213ENST00000534356 BNC2Q6ZN30 1099 aaPredicted RBP10.51□□□□□ -0.73
CASP4-213ENST00000534356 GOLM1Q8NBJ4 401 aa10.51□□□□□ -0.73
CASP4-213ENST00000534356 CEP41Q9BYV8 373 aa10.51□□□□□ -0.73
CASP4-213ENST00000534356 SYNGAP1Q96PV0 1343 aa10.51□□□□□ -0.73
CASP4-213ENST00000534356 ERCC5P28715 1186 aaPredicted RBP10.5□□□□□ -0.73
CASP4-213ENST00000534356 GATA4P43694 442 aa10.5□□□□□ -0.73
CASP4-213ENST00000534356 CDK8P49336 464 aa10.5□□□□□ -0.73
CASP4-213ENST00000534356 HNRNPUQ00839 825 aaKnown RBP eCLIP10.5□□□□□ -0.73
CASP4-213ENST00000534356 ZC3H12AQ5D1E8 599 aaKnown RBP10.5□□□□□ -0.73
CASP4-213ENST00000534356 SNAP47Q5SQN1 464 aa10.5□□□□□ -0.73
CASP4-213ENST00000534356 DZIP1LQ8IYY4 767 aaKnown RBP10.5□□□□□ -0.73
CASP4-213ENST00000534356 ZNF296Q8WUU4 475 aaPredicted RBP10.5□□□□□ -0.73
CASP4-213ENST00000534356 KCNQ5Q9NR82 932 aa10.5□□□□□ -0.73
CASP4-213ENST00000534356 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.5□□□□□ -0.73
CASP4-213ENST00000534356 TMPRSS2O15393 492 aa10.49□□□□□ -0.73
CASP4-213ENST00000534356 F13A1P00488 732 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms