RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 MFSD14BQ5SR56 506 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 PLCD1P51178 756 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 SNX16P57768 344 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 IFFO1Q0D2I5 559 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 PTPN14Q15678 1187 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 CC2D2BQ6DHV5 1058 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 NLRX1Q86UT6 975 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
COLCA1-203ENST00000532918 BRD2P25440 801 aaKnown RBP12.11□□□□□ -0.47
COLCA1-203ENST00000532918 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 AOX1Q06278 1338 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 INSRP06213 1382 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 TAF5LO75529 589 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 DEXIO95424 95 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
COLCA1-203ENST00000532918 TIMM10P62072 90 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
COLCA1-203ENST00000532918 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 TMX3Q96JJ7 454 aa12.11□□□□□ -0.47
COLCA1-203ENST00000532918 TRIM6Q9C030 488 aaPredicted RBP12.11□□□□□ -0.47
COLCA1-203ENST00000532918 MYCLP12524 364 aaPredicted RBP12.1□□□□□ -0.47
COLCA1-203ENST00000532918 CYLC1P35663 651 aaPredicted RBP12.1□□□□□ -0.47
COLCA1-203ENST00000532918 SPATA24Q86W54 205 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 FNBP1Q96RU3 617 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 MYO5CQ9NQX4 1742 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 FAM193AP78312 1265 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 MRPS9P82933 396 aaKnown RBP12.1□□□□□ -0.47
COLCA1-203ENST00000532918 PRPF4BQ13523 1007 aaKnown RBP12.1□□□□□ -0.47
COLCA1-203ENST00000532918 MCM7P33993 719 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 TTC16Q8NEE8 873 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 SREK1Q8WXA9 508 aaKnown RBP12.1□□□□□ -0.47
COLCA1-203ENST00000532918 ARHGEF5Q12774 1597 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 TCP10Q12799 353 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 WDR44Q5JSH3 913 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 SV2BQ7L1I2 683 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 SPTLC2O15270 562 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 IQUBQ8NA54 791 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 FRMD4BQ9Y2L6 1034 aa12.1□□□□□ -0.47
COLCA1-203ENST00000532918 FSD2A1L4K1 749 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 ADCY7P51828 1080 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 CCNA1P78396 465 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 CBX1P83916 185 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 ATL3Q6DD88 541 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 GOLGA1Q92805 767 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 IKBKGQ9Y6K9 419 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
COLCA1-203ENST00000532918 USPL1Q5W0Q7 1092 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 KDM5CP41229 1560 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 MLH3Q9UHC1 1453 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 KIAA0232Q92628 1395 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 ZBTB24O43167 697 aaPredicted RBP12.09□□□□□ -0.47
COLCA1-203ENST00000532918 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
COLCA1-203ENST00000532918 SUPT20HL1Q3ZLR7 823 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 TMCO3Q6UWJ1 677 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 CCDC24Q8N4L8 307 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 ZBTB38Q8NAP3 1195 aaPredicted RBP12.09□□□□□ -0.47
COLCA1-203ENST00000532918 KIF18AQ8NI77 898 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 PZPP20742 1482 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 CLGNO14967 610 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 PPFIA3O75145 1194 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 KIAA0753Q2KHM9 967 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 DHX58Q96C10 678 aa12.09□□□□□ -0.47
COLCA1-203ENST00000532918 BCCIPQ9P287 314 aaKnown RBP eCLIP12.09□□□□□ -0.47
COLCA1-203ENST00000532918 WDR17Q8IZU2 1322 aa12.08□□□□□ -0.47
COLCA1-203ENST00000532918 IGHDP01880 384 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 PCCAP05165 728 aaPredicted RBP12.08□□□□□ -0.48
COLCA1-203ENST00000532918 CCT6AP40227 531 aaKnown RBP12.08□□□□□ -0.48
COLCA1-203ENST00000532918 GTF2A1P52655 376 aaPredicted RBP12.08□□□□□ -0.48
COLCA1-203ENST00000532918 KRT25Q7Z3Z0 450 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 MAPKAPK5Q8IW41 473 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 SEPT12Q8IYM1 358 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 CPXCR1Q8N123 301 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 TGFBRAP1Q8WUH2 860 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 PKD2L1Q9P0L9 805 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 LETM2Q2VYF4 491 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 RUFY3Q7L099 469 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 ARMC9Q7Z3E5 817 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 ZNF594Q96JF6 807 aaPredicted RBP12.08□□□□□ -0.48
COLCA1-203ENST00000532918 DBNDD2Q9BQY9 259 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 GPAA1O43292 621 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 FERP16591 822 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 ZNF165P49910 485 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 LEMD3Q9Y2U8 911 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 ARHGEF35A5YM69 484 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 CRKLP46109 303 aaKnown RBP12.08□□□□□ -0.48
COLCA1-203ENST00000532918 DNA2P51530 1060 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 RILPL1Q5EBL4 403 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 DPH6Q7L8W6 267 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 TCEANC2Q96MN5 208 aa12.08□□□□□ -0.48
COLCA1-203ENST00000532918 XDHP47989 1333 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms