RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CASQ1P31415 396 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 GYG1P46976 350 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 PAGR1Q9BTK6 254 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
PTPRK-221ENST00000532331 TET3O43151 1660 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 SYNMO15061 1565 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 SPATA31E1Q6ZUB1 1445 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 GPAA1O43292 621 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 NEMFO60524 1076 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 NPR1P16066 1061 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
PTPRK-221ENST00000532331 PKD2L1Q9P0L9 805 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 ABT1Q9ULW3 272 aaKnown RBP12.85□□□□□ -0.35
PTPRK-221ENST00000532331 KIF4BQ2VIQ3 1234 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 KIF18AQ8NI77 898 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 CAVIN2O95810 425 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 ZAP70P43403 619 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 GSDMDP57764 484 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 ERFEQ4G0M1 354 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 CREB3L3Q68CJ9 461 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 NSMFQ6X4W1 530 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 DHX32Q7L7V1 743 aaKnown RBP12.85□□□□□ -0.35
PTPRK-221ENST00000532331 CPLX3Q8WVH0 158 aa12.85□□□□□ -0.35
PTPRK-221ENST00000532331 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
PTPRK-221ENST00000532331 CCDC102AQ96A19 550 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 MYCLP12524 364 aaPredicted RBP12.84□□□□□ -0.35
PTPRK-221ENST00000532331 EZRP15311 586 aaKnown RBP12.84□□□□□ -0.35
PTPRK-221ENST00000532331 GLT8D2Q9H1C3 349 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 RMND1Q9NWS8 449 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
PTPRK-221ENST00000532331 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 KRT13P13646 458 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 ARMC9Q7Z3E5 817 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 USP25Q9UHP3 1055 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 B4E1Z4 1266 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 ZBTB7BO15156 539 aaPredicted RBP12.84□□□□□ -0.35
PTPRK-221ENST00000532331 PRDM1O75626 825 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 SUPT20HL1Q3ZLR7 823 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTPRK-221ENST00000532331 ZNF532Q9HCE3 1301 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 GOLGA6L7A0A1B0GV03 622 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 TRIM75PA6NK02 468 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
PTPRK-221ENST00000532331 FAM13AO94988 1023 aa12.83□□□□□ -0.35
PTPRK-221ENST00000532331 RLBP1P12271 317 aa12.83□□□□□ -0.35
PTPRK-221ENST00000532331 SPON1Q9HCB6 807 aa12.83□□□□□ -0.35
PTPRK-221ENST00000532331 APOBRQ0VD83 1088 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 TAF12Q16514 161 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 MASTLQ96GX5 879 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 CRACR2AQ9BSW2 395 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 URI1O94763 535 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-221ENST00000532331 PAFAH1B1P43034 410 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 IMPG2Q9BZV3 1241 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 MMRN2Q9H8L6 949 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 ARPP21Q9UBL0 812 aaPredicted RBP12.83□□□□□ -0.36
PTPRK-221ENST00000532331 ERVV-1B6SEH8 477 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 SYKP43405 635 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 ZNF165P49910 485 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 CHURC1Q8WUH1 139 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 TMEM87BQ96K49 555 aa12.83□□□□□ -0.36
PTPRK-221ENST00000532331 RXRAP19793 462 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 LUZP1Q86V48 1076 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 KCNG4Q8TDN1 519 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 TAOK3Q9H2K8 898 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 DBNDD1Q9H9R9 158 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 IBTKQ9P2D0 1353 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-221ENST00000532331 MCM3P25205 808 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 UBE4AQ14139 1066 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 MAP9Q49MG5 647 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 TMC6Q7Z403 805 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 FAM212AQ96EL1 285 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 BCAMP50895 628 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 TMCO3Q6UWJ1 677 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 KBTBD3Q8NAB2 608 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 TTC16Q8NEE8 873 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 GREM2Q9H772 168 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
PTPRK-221ENST00000532331 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 KIFC2Q96AC6 838 aa12.82□□□□□ -0.36
PTPRK-221ENST00000532331 KIF4AO95239 1232 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 AZI2Q9H6S1 392 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 ABCA9Q8IUA7 1624 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 DKC1O60832 514 aaKnown RBP eCLIP12.81□□□□□ -0.369e-7■■■■■ 28.8
PTPRK-221ENST00000532331 BTDP43251 543 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 HEG1Q9ULI3 1381 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 RAD17O75943 681 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 CNGA1P29973 690 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 TXNRD1Q16881 649 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 ALS2CR12Q96Q35 445 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 M0QZ92 97 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 MCM7P33993 719 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 KLHL40Q2TBA0 621 aa12.81□□□□□ -0.36
PTPRK-221ENST00000532331 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms