RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 USTQ9Y2C2 406 aa7.67□□□□□ -1.18
USP47-211ENST00000531513 DAGLAQ9Y4D2 1042 aa7.67□□□□□ -1.18
USP47-211ENST00000531513 H3BRB1 525 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 ICMTO60725 284 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 PDE3AQ14432 1141 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 DDX54Q8TDD1 881 aaKnown RBP7.66□□□□□ -1.18
USP47-211ENST00000531513 ASIC4Q96FT7 647 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 WDR18Q9BV38 432 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 EHD4Q9H223 541 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 TUT1Q9H6E5 874 aaKnown RBP7.66□□□□□ -1.18
USP47-211ENST00000531513 NPHS2Q9NP85 383 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 EGFL7Q9UHF1 273 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 BRPF3Q9ULD4 1205 aa7.66□□□□□ -1.18
USP47-211ENST00000531513 AOC2O75106 756 aa7.65□□□□□ -1.18
USP47-211ENST00000531513 ITPKAP23677 461 aa7.65□□□□□ -1.18
USP47-211ENST00000531513 ORC1Q13415 861 aa7.65□□□□□ -1.18
USP47-211ENST00000531513 LGR6Q9HBX8 967 aa7.65□□□□□ -1.18
USP47-211ENST00000531513 JUNBP17275 347 aaPredicted RBP7.64□□□□□ -1.19
USP47-211ENST00000531513 JAG1P78504 1218 aa7.64□□□□□ -1.19
USP47-211ENST00000531513 ECM1Q16610 540 aa7.64□□□□□ -1.19
USP47-211ENST00000531513 ZNF574Q6ZN55 896 aaPredicted RBP7.64□□□□□ -1.19
USP47-211ENST00000531513 WFDC3Q8IUB2 231 aa7.64□□□□□ -1.19
USP47-211ENST00000531513 ABCB6Q9NP58 842 aa7.64□□□□□ -1.19
USP47-211ENST00000531513 PPP1R9AQ9ULJ8 1098 aa7.64□□□□□ -1.19
USP47-211ENST00000531513 SERPINB4P48594 390 aa7.63□□□□□ -1.19
USP47-211ENST00000531513 AP3B2Q13367 1082 aa7.63□□□□□ -1.19
USP47-211ENST00000531513 GLYCTKQ8IVS8 523 aa7.63□□□□□ -1.19
USP47-211ENST00000531513 POU5F2Q8N7G0 328 aa7.63□□□□□ -1.19
USP47-211ENST00000531513 RETREG2Q8NC44 543 aa7.63□□□□□ -1.19
USP47-211ENST00000531513 BCL7CQ8WUZ0 217 aaPredicted RBP7.63□□□□□ -1.19
USP47-211ENST00000531513 TMPRSS2O15393 492 aa7.62□□□□□ -1.19
USP47-211ENST00000531513 CPNE3O75131 537 aaKnown RBP7.62□□□□□ -1.19
USP47-211ENST00000531513 NEFLP07196 543 aa7.62□□□□□ -1.19
USP47-211ENST00000531513 ARHGAP4P98171 946 aa7.62□□□□□ -1.19
USP47-211ENST00000531513 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
USP47-211ENST00000531513 AEBP1Q8IUX7 1158 aa7.62□□□□□ -1.19
USP47-211ENST00000531513 FAM129BQ96TA1 746 aa7.62□□□□□ -1.19
USP47-211ENST00000531513 SLC5A6Q9Y289 635 aa7.62□□□□□ -1.19
USP47-211ENST00000531513 SYNGAP1Q96PV0 1343 aa7.61□□□□□ -1.19
USP47-211ENST00000531513 NDUFB5O43674 189 aa7.61□□□□□ -1.19
USP47-211ENST00000531513 PAPLNO95428 1278 aa7.61□□□□□ -1.19
USP47-211ENST00000531513 PTPN12Q05209 780 aaKnown RBP7.61□□□□□ -1.19
USP47-211ENST00000531513 PRPF40BQ6NWY9 871 aaKnown RBP7.61□□□□□ -1.19
USP47-211ENST00000531513 CCDC86Q9H6F5 360 aaKnown RBP7.61□□□□□ -1.19
USP47-211ENST00000531513 C8AP07357 584 aa7.6□□□□□ -1.19
USP47-211ENST00000531513 LIG1P18858 919 aa7.6□□□□□ -1.19
USP47-211ENST00000531513 CDK5R2Q13319 367 aa7.6□□□□□ -1.19
USP47-211ENST00000531513 PLCL1Q15111 1095 aa7.6□□□□□ -1.19
USP47-211ENST00000531513 SPRED2Q7Z698 418 aa7.6□□□□□ -1.19
USP47-211ENST00000531513 WDR89Q96FK6 387 aaPredicted RBP7.6□□□□□ -1.19
USP47-211ENST00000531513 CRIM1Q9NZV1 1036 aa7.6□□□□□ -1.19
USP47-211ENST00000531513 FAM87AP0C7U9 286 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 PDE4CQ08493 712 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 FAAP100Q0VG06 881 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 PDE3BQ13370 1112 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 ZNF792Q3KQV3 632 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 CYP27C1Q4G0S4 372 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 B4GALNT3Q6L9W6 998 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 STK11IPQ8N1F8 1099 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 FAM181AQ8N9Y4 354 aa7.59□□□□□ -1.19
USP47-211ENST00000531513 ZC3H12CQ9C0D7 883 aaKnown RBP7.59□□□□□ -1.19
USP47-211ENST00000531513 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
USP47-211ENST00000531513 EIF1AYO14602 144 aaKnown RBP7.58□□□□□ -1.2
USP47-211ENST00000531513 GPR182O15218 404 aa7.58□□□□□ -1.2
USP47-211ENST00000531513 GADD45BO75293 160 aaPredicted RBP7.58□□□□□ -1.2
USP47-211ENST00000531513 ZNF157P51786 506 aaPredicted RBP7.58□□□□□ -1.2
USP47-211ENST00000531513 RPS26P11Q5JNZ5 115 aaPredicted RBP7.58□□□□□ -1.2
USP47-211ENST00000531513 PLD6Q8N2A8 252 aaKnown RBP7.58□□□□□ -1.2
USP47-211ENST00000531513 CCDC74AQ96AQ1 378 aa7.58□□□□□ -1.2
USP47-211ENST00000531513 PIDD1Q9HB75 910 aa7.58□□□□□ -1.2
USP47-211ENST00000531513 ZNF862O60290 1169 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 ID3Q02535 119 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 BNIP3Q12983 259 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 GLIS3Q8NEA6 775 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 MISP3Q96FF7 219 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 FANCD2OSQ96PS1 177 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 ATXN3LQ9H3M9 355 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 PCDHGC5Q9Y5F6 944 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 U3KQE9 123 aa7.57□□□□□ -1.2
USP47-211ENST00000531513 IGHA2P01877 340 aa7.56□□□□□ -1.2
USP47-211ENST00000531513 GRM2Q14416 872 aa7.56□□□□□ -1.2
USP47-211ENST00000531513 LCE4AQ5TA78 99 aa7.56□□□□□ -1.2
USP47-211ENST00000531513 DNAJC25Q9H1X3 360 aa7.56□□□□□ -1.2
USP47-211ENST00000531513 GSTP1P09211 210 aaKnown RBP7.55□□□□□ -1.2
USP47-211ENST00000531513 KIF4BQ2VIQ3 1234 aa7.55□□□□□ -1.2
USP47-211ENST00000531513 TXNDC2Q86VQ3 553 aa7.55□□□□□ -1.2
USP47-211ENST00000531513 SMYD4Q8IYR2 804 aaPredicted RBP7.55□□□□□ -1.2
USP47-211ENST00000531513 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
USP47-211ENST00000531513 CITED4Q96RK1 184 aa7.55□□□□□ -1.2
USP47-211ENST00000531513 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
USP47-211ENST00000531513 DISC1Q9NRI5 854 aa7.55□□□□□ -1.2
USP47-211ENST00000531513 TRAK1Q9UPV9 953 aa7.55□□□□□ -1.2
USP47-211ENST00000531513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.55□□□□□ -1.2
USP47-211ENST00000531513 CARMIL2Q6F5E8 1435 aa7.54□□□□□ -1.2
USP47-211ENST00000531513 SLFN14P0C7P3 912 aa7.54□□□□□ -1.2
USP47-211ENST00000531513 FUT4P22083 530 aa7.54□□□□□ -1.2
USP47-211ENST00000531513 CD96P40200 585 aa7.54□□□□□ -1.2
USP47-211ENST00000531513 TTLL4Q14679 1199 aa7.54□□□□□ -1.2
USP47-211ENST00000531513 GZF1Q9H116 711 aaPredicted RBP7.54□□□□□ -1.2
USP47-211ENST00000531513 KRT82Q9NSB4 513 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms