RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 OTUD7BQ6GQQ9 843 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 CLEC4GQ6UXB4 293 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 BARGINQ6ZT62 677 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 MARCH10Q8NA82 808 aaPredicted RBP20.01■□□□□ 0.79
BRCA2-204ENST00000530893 CDC5LQ99459 802 aaKnown RBP20.01■□□□□ 0.79
BRCA2-204ENST00000530893 SEC31BQ9NQW1 1179 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 NIP7Q9Y221 180 aaKnown RBP eCLIP20.01■□□□□ 0.79
BRCA2-204ENST00000530893 CLIC4Q9Y696 253 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 NID2Q14112 1375 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 MYH14Q7Z406 1995 aaKnown RBP20.01■□□□□ 0.79
BRCA2-204ENST00000530893 NEDD4P46934 1319 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 STK36Q9NRP7 1315 aa20.01■□□□□ 0.79
BRCA2-204ENST00000530893 BCORQ6W2J9 1755 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 UQCRHLA0A096LP55 91 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 UQCRHP07919 91 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 ANO1Q5XXA6 986 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 ALG1Q9BT22 464 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 LY9Q9HBG7 655 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 EPB41L4AQ9HCS5 686 aaPredicted RBP20■□□□□ 0.79
BRCA2-204ENST00000530893 SPATA31A5Q5VU36 1347 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 SPATA31A7Q8IWB4 1347 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 DYNC1I1O14576 645 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 RGL2O15211 777 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 ITPK1Q13572 414 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 TMEM67Q5HYA8 995 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 AKNAD1Q5T1N1 836 aa20■□□□□ 0.79
BRCA2-204ENST00000530893 COL5A3P25940 1745 aaPredicted RBP19.99■□□□□ 0.79
BRCA2-204ENST00000530893 NFXL1Q6ZNB6 911 aa19.99■□□□□ 0.79
BRCA2-204ENST00000530893 CEP57L1Q8IYX8 460 aa19.99■□□□□ 0.79
BRCA2-204ENST00000530893 MRFAP1L1Q96HT8 127 aa19.99■□□□□ 0.79
BRCA2-204ENST00000530893 DENND2AQ9ULE3 1009 aa19.99■□□□□ 0.79
BRCA2-204ENST00000530893 GSG1L2A8MUP6 293 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 NTRK3Q16288 839 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 C11orf57Q6ZUT1 292 aaPredicted RBP19.98■□□□□ 0.79
BRCA2-204ENST00000530893 DRC7Q8IY82 874 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 STAG1Q8WVM7 1258 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 ACSBG1Q96GR2 724 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 SDF4Q9BRK5 362 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 BCL9LQ86UU0 1499 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 BECN2A8MW95 431 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 KIF28PB7ZC32 967 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 CMA1P23946 247 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 IARSP41252 1262 aaKnown RBP19.98■□□□□ 0.79
BRCA2-204ENST00000530893 RCAN1P53805 252 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 CHRNDQ07001 517 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 SLC39A14Q15043 492 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 MFSD6Q6ZSS7 791 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 RAB11FIP4Q86YS3 637 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 JMYQ8N9B5 988 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 WASF1Q92558 559 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 ARMT1Q9H993 441 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 ZSWIM5Q9P217 1185 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 SLC12A7Q9Y666 1083 aa19.98■□□□□ 0.79
BRCA2-204ENST00000530893 FAM177BA6PVY3 158 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 GOLGA8AA7E2F4 631 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 PPP6R2O75170 966 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 NDUFA8P51970 172 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 TRIM29Q14134 588 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 HSP90AA2PQ14568 343 aaPredicted RBP19.97■□□□□ 0.79
BRCA2-204ENST00000530893 SART3Q15020 963 aaKnown RBP19.97■□□□□ 0.79
BRCA2-204ENST00000530893 MICU3Q86XE3 530 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 RNF41Q9H4P4 317 aaPredicted RBP19.97■□□□□ 0.79
BRCA2-204ENST00000530893 A0A1B0GVL5 298 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 CCDC69A6NI79 296 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 IFIT3O14879 490 aaKnown RBP19.97■□□□□ 0.79
BRCA2-204ENST00000530893 ADAMTS2O95450 1211 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 PTGS1P23219 599 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 CDC27P30260 824 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 BCAMP50895 628 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 KRT40Q6A162 431 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 VPS37DQ86XT2 251 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 TMTC2Q8N394 836 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 BPIFA3Q9BQP9 254 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 KIAA1468Q9P260 1216 aa19.97■□□□□ 0.79
BRCA2-204ENST00000530893 U2AF2P26368 475 aaKnown RBP eCLIP19.96■□□□□ 0.79
BRCA2-204ENST00000530893 ZRSR1Q15695 479 aaKnown RBP19.96■□□□□ 0.79
BRCA2-204ENST00000530893 CCDC186Q7Z3E2 898 aa19.96■□□□□ 0.79
BRCA2-204ENST00000530893 MYRIPQ8NFW9 859 aa19.96■□□□□ 0.79
BRCA2-204ENST00000530893 TIGD1Q96MW7 591 aa19.96■□□□□ 0.79
BRCA2-204ENST00000530893 CLIP2Q9UDT6 1046 aa19.96■□□□□ 0.79
BRCA2-204ENST00000530893 PYCARDQ9ULZ3 195 aa19.96■□□□□ 0.79
BRCA2-204ENST00000530893 ZNF804BA4D1E1 1349 aa19.96■□□□□ 0.79
BRCA2-204ENST00000530893 ECM29Q5VYK3 1845 aa19.96■□□□□ 0.79
BRCA2-204ENST00000530893 A0A0G2JS52 829 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 TDO2P48775 406 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 AXDND1Q5T1B0 1012 aaPredicted RBP19.95■□□□□ 0.78
BRCA2-204ENST00000530893 NKX2-3Q8TAU0 364 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 GJB4Q9NTQ9 266 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 GNL3LQ9NVN8 582 aaKnown RBP19.95■□□□□ 0.78
BRCA2-204ENST00000530893 LRP2BPQ9P2M1 347 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 SLC4A4Q9Y6R1 1079 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 SNAP23O00161 211 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 IFNAR1P17181 557 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 RBM6P78332 1123 aaKnown RBP19.95■□□□□ 0.78
BRCA2-204ENST00000530893 CTDSPL2Q05D32 466 aa19.95■□□□□ 0.78
BRCA2-204ENST00000530893 DHX40Q8IX18 779 aaKnown RBP19.95■□□□□ 0.78
BRCA2-204ENST00000530893 FAM217BQ9NTX9 383 aaPredicted RBP19.95■□□□□ 0.78
BRCA2-204ENST00000530893 NEMFO60524 1076 aa19.94■□□□□ 0.78
BRCA2-204ENST00000530893 FMNL1O95466 1100 aaPredicted RBP19.94■□□□□ 0.78
BRCA2-204ENST00000530893 SSRP1Q08945 709 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms