RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 AKAP4Q5JQC9 854 aa12.05□□□□□ -0.48
CSDE1-213ENST00000530784 FBXO33Q7Z6M2 555 aa12.05□□□□□ -0.48
CSDE1-213ENST00000530784 C2CD4AQ8NCU7 369 aaPredicted RBP12.05□□□□□ -0.48
CSDE1-213ENST00000530784 CCDC86Q9H6F5 360 aaKnown RBP12.05□□□□□ -0.48
CSDE1-213ENST00000530784 PPM1HQ9ULR3 514 aa12.05□□□□□ -0.48
CSDE1-213ENST00000530784 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 GSTP1P09211 210 aaKnown RBP12.04□□□□□ -0.48
CSDE1-213ENST00000530784 ADH5P11766 374 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 FSTP19883 344 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 EIF4BP23588 611 aaKnown RBP12.04□□□□□ -0.48
CSDE1-213ENST00000530784 TAGLNQ01995 201 aaKnown RBP12.04□□□□□ -0.48
CSDE1-213ENST00000530784 SGO2Q562F6 1265 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 PDZD3Q86UT5 571 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 SULF2Q8IWU5 870 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 WDR89Q96FK6 387 aaPredicted RBP12.04□□□□□ -0.48
CSDE1-213ENST00000530784 KCNF1Q9H3M0 494 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 PARP2Q9UGN5 583 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 AK5Q9Y6K8 562 aa12.04□□□□□ -0.48
CSDE1-213ENST00000530784 HMX2A2RU54 273 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 ENC1O14682 589 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 AOC2O75106 756 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 LIG1P18858 919 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 TRIM42Q8IWZ5 723 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 WDR18Q9BV38 432 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 CEP44Q9C0F1 390 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 C7orf69Q9H7B7 122 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 HIF3AQ9Y2N7 669 aa12.03□□□□□ -0.48
CSDE1-213ENST00000530784 ERCC3P19447 782 aa12.02□□□□□ -0.49
CSDE1-213ENST00000530784 NME2P22392 152 aa12.02□□□□□ -0.49
CSDE1-213ENST00000530784 ARNTP27540 789 aa12.02□□□□□ -0.49
CSDE1-213ENST00000530784 BEND4Q6ZU67 534 aa12.02□□□□□ -0.49
CSDE1-213ENST00000530784 CLEC10AQ8IUN9 316 aa12.02□□□□□ -0.49
CSDE1-213ENST00000530784 ZNF862O60290 1169 aa12.01□□□□□ -0.49
CSDE1-213ENST00000530784 PAGE1O75459 146 aa12.01□□□□□ -0.49
CSDE1-213ENST00000530784 MAP4P27816 1152 aaKnown RBP12.01□□□□□ -0.49
CSDE1-213ENST00000530784 CDPF1Q6NVV7 123 aa12.01□□□□□ -0.49
CSDE1-213ENST00000530784 ANKRD24Q8TF21 1146 aa12.01□□□□□ -0.49
CSDE1-213ENST00000530784 KCNB2Q92953 911 aa12.01□□□□□ -0.49
CSDE1-213ENST00000530784 FAM83CQ9BQN1 747 aa12.01□□□□□ -0.49
CSDE1-213ENST00000530784 WDR62O43379 1518 aa12.01□□□□□ -0.49
CSDE1-213ENST00000530784 USP11P51784 963 aa12□□□□□ -0.49
CSDE1-213ENST00000530784 DYMQ7RTS9 669 aa12□□□□□ -0.49
CSDE1-213ENST00000530784 PPP1R9AQ9ULJ8 1098 aa12□□□□□ -0.49
CSDE1-213ENST00000530784 ACTL7BQ9Y614 415 aa12□□□□□ -0.49
CSDE1-213ENST00000530784 RXRBP28702 533 aa11.99□□□□□ -0.49
CSDE1-213ENST00000530784 DAB2P98082 770 aa11.99□□□□□ -0.49
CSDE1-213ENST00000530784 FBLIM1Q8WUP2 373 aa11.99□□□□□ -0.49
CSDE1-213ENST00000530784 FAM161BQ96MY7 647 aa11.99□□□□□ -0.49
CSDE1-213ENST00000530784 KRT82Q9NSB4 513 aa11.99□□□□□ -0.49
CSDE1-213ENST00000530784 AP4E1Q9UPM8 1137 aa11.99□□□□□ -0.49
CSDE1-213ENST00000530784 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
CSDE1-213ENST00000530784 BMP6P22004 513 aa11.98□□□□□ -0.49
CSDE1-213ENST00000530784 PSMD2Q13200 908 aa11.98□□□□□ -0.49
CSDE1-213ENST00000530784 ZMYM1Q5SVZ6 1142 aa11.98□□□□□ -0.49
CSDE1-213ENST00000530784 TMCO4Q5TGY1 634 aa11.98□□□□□ -0.49
CSDE1-213ENST00000530784 CBX8Q9HC52 389 aa11.98□□□□□ -0.49
CSDE1-213ENST00000530784 TTF2Q9UNY4 1162 aaKnown RBP11.98□□□□□ -0.49
CSDE1-213ENST00000530784 SYNGAP1Q96PV0 1343 aa11.97□□□□□ -0.49
CSDE1-213ENST00000530784 IGLV1-40P01703 118 aa11.97□□□□□ -0.49
CSDE1-213ENST00000530784 CELA3AP09093 270 aa11.97□□□□□ -0.49
CSDE1-213ENST00000530784 XPCQ01831 940 aaPredicted RBP11.97□□□□□ -0.49
CSDE1-213ENST00000530784 ZNF252P-AS1Q0IIN9 211 aa11.97□□□□□ -0.49
CSDE1-213ENST00000530784 MAP1SQ66K74 1059 aaPredicted RBP11.97□□□□□ -0.49
CSDE1-213ENST00000530784 MPRIPQ6WCQ1 1025 aa11.97□□□□□ -0.49
CSDE1-213ENST00000530784 GRIN3AQ8TCU5 1115 aa11.97□□□□□ -0.49
CSDE1-213ENST00000530784 EMILIN2Q9BXX0 1053 aa11.97□□□□□ -0.49
CSDE1-213ENST00000530784 RSF1Q96T23 1441 aaPredicted RBP11.96□□□□□ -0.49
CSDE1-213ENST00000530784 NFIAQ12857 509 aa11.96□□□□□ -0.49
CSDE1-213ENST00000530784 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.49
CSDE1-213ENST00000530784 RASIP1Q5U651 963 aa11.96□□□□□ -0.49
CSDE1-213ENST00000530784 RNF43Q68DV7 783 aa11.96□□□□□ -0.49
CSDE1-213ENST00000530784 SLC51AQ86UW1 340 aa11.96□□□□□ -0.49
CSDE1-213ENST00000530784 FAM105AQ9NUU6 356 aa11.96□□□□□ -0.49
CSDE1-213ENST00000530784 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
CSDE1-213ENST00000530784 TMPRSS2O15393 492 aa11.95□□□□□ -0.5
CSDE1-213ENST00000530784 GSC2O15499 205 aa11.95□□□□□ -0.5
CSDE1-213ENST00000530784 SLFN14P0C7P3 912 aa11.95□□□□□ -0.5
CSDE1-213ENST00000530784 ASPAP45381 313 aa11.95□□□□□ -0.5
CSDE1-213ENST00000530784 TMC4Q7Z404 712 aa11.95□□□□□ -0.5
CSDE1-213ENST00000530784 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
CSDE1-213ENST00000530784 SAMM50Q9Y512 469 aa11.95□□□□□ -0.5
CSDE1-213ENST00000530784 TOP2AP11388 1531 aaKnown RBP11.95□□□□□ -0.5
CSDE1-213ENST00000530784 FAM95CA0A1B0GW59 222 aa11.94□□□□□ -0.5
CSDE1-213ENST00000530784 NFKBIBQ15653 356 aa11.94□□□□□ -0.5
CSDE1-213ENST00000530784 CRIM1Q9NZV1 1036 aa11.94□□□□□ -0.5
CSDE1-213ENST00000530784 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
CSDE1-213ENST00000530784 CFTRP13569 1480 aa11.94□□□□□ -0.5
CSDE1-213ENST00000530784 RAB6AP20340 208 aa11.93□□□□□ -0.5
CSDE1-213ENST00000530784 SV2BQ7L1I2 683 aa11.93□□□□□ -0.5
CSDE1-213ENST00000530784 GPBAR1Q8TDU6 330 aa11.93□□□□□ -0.5
CSDE1-213ENST00000530784 EZH1Q92800 747 aaPredicted RBP11.93□□□□□ -0.5
CSDE1-213ENST00000530784 NFICP08651 508 aa11.92□□□□□ -0.5
CSDE1-213ENST00000530784 ID3Q02535 119 aa11.92□□□□□ -0.5
CSDE1-213ENST00000530784 MEI1Q5TIA1 1274 aa11.92□□□□□ -0.5
CSDE1-213ENST00000530784 PCNX4Q63HM2 1172 aa11.92□□□□□ -0.5
CSDE1-213ENST00000530784 DBNDD2Q9BQY9 259 aa11.92□□□□□ -0.5
CSDE1-213ENST00000530784 YIPF2Q9BWQ6 316 aa11.92□□□□□ -0.5
CSDE1-213ENST00000530784 ACSS3Q9H6R3 686 aa11.92□□□□□ -0.5
CSDE1-213ENST00000530784 CACNA2D2Q9NY47 1150 aa11.92□□□□□ -0.5
CSDE1-213ENST00000530784 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms