RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 FGD5Q6ZNL6 1462 aa6.25□□□□□ -1.41
PTPRC-214ENST00000530727 FGD1P98174 961 aa6.25□□□□□ -1.41
PTPRC-214ENST00000530727 PRSS36Q5K4E3 855 aa6.25□□□□□ -1.41
PTPRC-214ENST00000530727 SUGCTQ9HAC7 445 aa6.25□□□□□ -1.41
PTPRC-214ENST00000530727 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
PTPRC-214ENST00000530727 PRPF40AO75400 957 aaKnown RBP6.24□□□□□ -1.41
PTPRC-214ENST00000530727 ECEL1O95672 775 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 PDE3AQ14432 1141 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 DNAJC14Q6Y2X3 702 aaPredicted RBP6.24□□□□□ -1.41
PTPRC-214ENST00000530727 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.24□□□□□ -1.41
PTPRC-214ENST00000530727 SMG8Q8ND04 991 aaKnown RBP6.24□□□□□ -1.41
PTPRC-214ENST00000530727 MYRFLQ96LU7 910 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 PUS7Q96PZ0 661 aaKnown RBP6.24□□□□□ -1.41
PTPRC-214ENST00000530727 C12orf49Q9H741 205 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 RAD18Q9NS91 495 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 RAXQ9Y2V3 346 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 POLA1P09884 1462 aaPredicted RBP6.24□□□□□ -1.41
PTPRC-214ENST00000530727 CTSBP07858 339 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 ITGB7P26010 798 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 FAM9AQ8IZU1 332 aaPredicted RBP6.24□□□□□ -1.41
PTPRC-214ENST00000530727 C3orf58Q8NDZ4 430 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 KCNF1Q9H3M0 494 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 STOML1Q9UBI4 398 aa6.24□□□□□ -1.41
PTPRC-214ENST00000530727 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
PTPRC-214ENST00000530727 BMP3P12645 472 aa6.23□□□□□ -1.41
PTPRC-214ENST00000530727 NPAS4Q8IUM7 802 aa6.23□□□□□ -1.41
PTPRC-214ENST00000530727 FRMD6Q96NE9 622 aa6.23□□□□□ -1.41
PTPRC-214ENST00000530727 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
PTPRC-214ENST00000530727 FAM8A1Q9UBU6 413 aa6.23□□□□□ -1.41
PTPRC-214ENST00000530727 WDR97A6NE52 1622 aa6.23□□□□□ -1.41
PTPRC-214ENST00000530727 TIAF1O95411 115 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 DRD2P14416 443 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 GNA15P30679 374 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 TPTE2Q6XPS3 522 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 FAM20CQ8IXL6 584 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 DUSP9Q99956 384 aaKnown RBP6.22□□□□□ -1.41
PTPRC-214ENST00000530727 ZC3H12CQ9C0D7 883 aaKnown RBP6.22□□□□□ -1.41
PTPRC-214ENST00000530727 HIF3AQ9Y2N7 669 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 ABCA10Q8WWZ4 1543 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 USP17L7P0C7H9 530 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 AKAP4Q5JQC9 854 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 USP35Q9P2H5 1018 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 PPM1HQ9ULR3 514 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 MRC2Q9UBG0 1479 aa6.22□□□□□ -1.41
PTPRC-214ENST00000530727 WDR62O43379 1518 aa6.21□□□□□ -1.41
PTPRC-214ENST00000530727 FBXO24O75426 580 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 ADH5P11766 374 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 FSTP19883 344 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 EIF4BP23588 611 aaKnown RBP6.21□□□□□ -1.42
PTPRC-214ENST00000530727 RXRBP28702 533 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 USP11P51784 963 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 HNRNPUQ00839 825 aaKnown RBP eCLIP6.21□□□□□ -1.42
PTPRC-214ENST00000530727 SOX4Q06945 474 aaPredicted RBP6.21□□□□□ -1.42
PTPRC-214ENST00000530727 SULF2Q8IWU5 870 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 CEP44Q9C0F1 390 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 AP4E1Q9UPM8 1137 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 KIF21BO75037 1637 aa6.21□□□□□ -1.42
PTPRC-214ENST00000530727 TARBP1Q13395 1621 aaKnown RBP6.2□□□□□ -1.42
PTPRC-214ENST00000530727 GSTP1P09211 210 aaKnown RBP6.2□□□□□ -1.42
PTPRC-214ENST00000530727 ERCC3P19447 782 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 SGO2Q562F6 1265 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 BEND4Q6ZU67 534 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 KIF27Q86VH2 1401 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 THOC2Q8NI27 1593 aaKnown RBP6.2□□□□□ -1.42
PTPRC-214ENST00000530727 PRXQ9BXM0 1461 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 RAD54L2Q9Y4B4 1467 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 HMX2A2RU54 273 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 GSC2O15499 205 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 AOC2O75106 756 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 MAP4P27816 1152 aaKnown RBP6.2□□□□□ -1.42
PTPRC-214ENST00000530727 ZMYM1Q5SVZ6 1142 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 CLEC10AQ8IUN9 316 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 TRIM42Q8IWZ5 723 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 C2CD4AQ8NCU7 369 aaPredicted RBP6.2□□□□□ -1.42
PTPRC-214ENST00000530727 KCNB2Q92953 911 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 NECAB3Q96P71 396 aaPredicted RBP6.2□□□□□ -1.42
PTPRC-214ENST00000530727 CCDC86Q9H6F5 360 aaKnown RBP6.2□□□□□ -1.42
PTPRC-214ENST00000530727 C7orf69Q9H7B7 122 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 CBX8Q9HC52 389 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 RNF19AQ9NV58 838 aa6.2□□□□□ -1.42
PTPRC-214ENST00000530727 TTF2Q9UNY4 1162 aaKnown RBP6.2□□□□□ -1.42
PTPRC-214ENST00000530727 LIG1P18858 919 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 NME2P22392 152 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 XPCQ01831 940 aaPredicted RBP6.19□□□□□ -1.42
PTPRC-214ENST00000530727 DYMQ7RTS9 669 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 FAM83CQ9BQN1 747 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 WDR18Q9BV38 432 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 YIPF2Q9BWQ6 316 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 EMILIN2Q9BXX0 1053 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 PARP2Q9UGN5 583 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 SAMM50Q9Y512 469 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 CUX2O14529 1486 aa6.19□□□□□ -1.42
PTPRC-214ENST00000530727 ARNTP27540 789 aa6.18□□□□□ -1.42
PTPRC-214ENST00000530727 PSMD2Q13200 908 aa6.18□□□□□ -1.42
PTPRC-214ENST00000530727 KRT82Q9NSB4 513 aa6.18□□□□□ -1.42
PTPRC-214ENST00000530727 AK5Q9Y6K8 562 aa6.18□□□□□ -1.42
PTPRC-214ENST00000530727 ABCA5Q8WWZ7 1642 aa6.18□□□□□ -1.42
PTPRC-214ENST00000530727 ENC1O14682 589 aa6.18□□□□□ -1.42
PTPRC-214ENST00000530727 IGLV1-40P01703 118 aa6.18□□□□□ -1.42
PTPRC-214ENST00000530727 MAP1SQ66K74 1059 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms