RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 GNL2Q13823 731 aaKnown RBP9.55□□□□□ -0.88
CASP4-208ENST00000530309 PRRT3Q5FWE3 981 aa9.55□□□□□ -0.88
CASP4-208ENST00000530309 CCDC84Q86UT8 332 aaPredicted RBP9.55□□□□□ -0.88
CASP4-208ENST00000530309 GOLM1Q8NBJ4 401 aa9.55□□□□□ -0.88
CASP4-208ENST00000530309 SUPT16HQ9Y5B9 1047 aaKnown RBP9.55□□□□□ -0.88
CASP4-208ENST00000530309 LOC100289279A0A1B0GTE1 492 aa9.54□□□□□ -0.88
CASP4-208ENST00000530309 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
CASP4-208ENST00000530309 TRIM37O94972 964 aa9.54□□□□□ -0.88
CASP4-208ENST00000530309 PAK2Q13177 524 aa9.54□□□□□ -0.88
CASP4-208ENST00000530309 HP1BP3Q5SSJ5 553 aaPredicted RBP9.54□□□□□ -0.88
CASP4-208ENST00000530309 TINF2Q9BSI4 451 aa9.54□□□□□ -0.88
CASP4-208ENST00000530309 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
CASP4-208ENST00000530309 CACNA2D2Q9NY47 1150 aa9.54□□□□□ -0.88
CASP4-208ENST00000530309 GREM1O60565 184 aa9.53□□□□□ -0.88
CASP4-208ENST00000530309 CTSBP07858 339 aa9.53□□□□□ -0.88
CASP4-208ENST00000530309 SEPT6Q14141 434 aa9.53□□□□□ -0.88
CASP4-208ENST00000530309 DUOXA2Q1HG44 320 aa9.53□□□□□ -0.88
CASP4-208ENST00000530309 IGF2-ASQ6U949 168 aa9.53□□□□□ -0.88
CASP4-208ENST00000530309 MPRIPQ6WCQ1 1025 aa9.53□□□□□ -0.88
CASP4-208ENST00000530309 GAL3ST3Q96A11 431 aa9.53□□□□□ -0.88
CASP4-208ENST00000530309 SCARF2Q96GP6 870 aaPredicted RBP9.53□□□□□ -0.88
CASP4-208ENST00000530309 CCDC86Q9H6F5 360 aaKnown RBP9.53□□□□□ -0.88
CASP4-208ENST00000530309 DLGAP3O95886 979 aa9.52□□□□□ -0.89
CASP4-208ENST00000530309 GJA8P48165 433 aa9.52□□□□□ -0.89
CASP4-208ENST00000530309 HNRNPUQ00839 825 aaKnown RBP eCLIP9.52□□□□□ -0.89
CASP4-208ENST00000530309 PDE3AQ14432 1141 aa9.52□□□□□ -0.89
CASP4-208ENST00000530309 DIEXFQ68CQ4 756 aaKnown RBP9.52□□□□□ -0.89
CASP4-208ENST00000530309 BNC2Q6ZN30 1099 aaPredicted RBP9.52□□□□□ -0.89
CASP4-208ENST00000530309 FAM196AQ6ZSG2 479 aa9.52□□□□□ -0.89
CASP4-208ENST00000530309 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
CASP4-208ENST00000530309 UBASH3BQ8TF42 649 aa9.52□□□□□ -0.89
CASP4-208ENST00000530309 JARID2Q92833 1246 aaPredicted RBP9.52□□□□□ -0.89
CASP4-208ENST00000530309 EAF1Q96JC9 268 aaPredicted RBP9.52□□□□□ -0.89
CASP4-208ENST00000530309 NT5C1AQ9BXI3 368 aa9.52□□□□□ -0.89
CASP4-208ENST00000530309 F13A1P00488 732 aa9.51□□□□□ -0.89
CASP4-208ENST00000530309 PTPN11Q06124 597 aaPredicted RBP9.51□□□□□ -0.89
CASP4-208ENST00000530309 GPBAR1Q8TDU6 330 aa9.51□□□□□ -0.89
CASP4-208ENST00000530309 GATAD2BQ8WXI9 593 aa9.51□□□□□ -0.89
CASP4-208ENST00000530309 GPRASP2Q96D09 838 aa9.51□□□□□ -0.89
CASP4-208ENST00000530309 FAM221AA4D161 298 aa9.5□□□□□ -0.89
CASP4-208ENST00000530309 ZNF862O60290 1169 aa9.5□□□□□ -0.89
CASP4-208ENST00000530309 SPATA31C1P0DKV0 1188 aa9.5□□□□□ -0.89
CASP4-208ENST00000530309 EXOSC6Q5RKV6 272 aaKnown RBP9.5□□□□□ -0.89
CASP4-208ENST00000530309 ACSBG1Q96GR2 724 aa9.5□□□□□ -0.89
CASP4-208ENST00000530309 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
CASP4-208ENST00000530309 ROBO2Q9HCK4 1378 aa9.5□□□□□ -0.89
CASP4-208ENST00000530309 CILPO75339 1184 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 WISP1O95388 367 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 LIG1P18858 919 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 KIF4BQ2VIQ3 1234 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 VPS37DQ86XT2 251 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 RASGRP4Q8TDF6 673 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 SPATA32Q96LK8 384 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 UBP1Q9NZI7 540 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 PCDHA4Q9UN74 947 aa9.49□□□□□ -0.89
CASP4-208ENST00000530309 MEGF11A6BM72 1044 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 APOBRQ0VD83 1088 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 GRIK4Q16099 956 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 ACAD11Q709F0 780 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 WDR89Q96FK6 387 aaPredicted RBP9.48□□□□□ -0.89
CASP4-208ENST00000530309 RUSC1Q9BVN2 902 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 LRRC3Q9BY71 257 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 TMPRSS13Q9BYE2 586 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 SYNGAP1Q96PV0 1343 aa9.48□□□□□ -0.89
CASP4-208ENST00000530309 FAM181BA6NEQ2 426 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 SLFN14P0C7P3 912 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 COL8A1P27658 744 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 CRKP46108 304 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 RPL6Q02878 288 aaKnown RBP9.47□□□□□ -0.89
CASP4-208ENST00000530309 MPP2Q14168 576 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
CASP4-208ENST00000530309 TMEM130Q8N3G9 435 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 FBXO27Q8NI29 283 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 RAD18Q9NS91 495 aa9.47□□□□□ -0.89
CASP4-208ENST00000530309 AOC2O75106 756 aa9.46□□□□□ -0.9
CASP4-208ENST00000530309 BPNT1O95861 308 aa9.46□□□□□ -0.9
CASP4-208ENST00000530309 SELPP16109 830 aa9.46□□□□□ -0.9
CASP4-208ENST00000530309 ARID5AQ03989 594 aa9.46□□□□□ -0.9
CASP4-208ENST00000530309 CWF19L2Q2TBE0 894 aaKnown RBP9.46□□□□□ -0.9
CASP4-208ENST00000530309 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.46□□□□□ -0.9
CASP4-208ENST00000530309 SREK1Q8WXA9 508 aaKnown RBP9.46□□□□□ -0.9
CASP4-208ENST00000530309 LENG1Q96BZ8 264 aaPredicted RBP9.46□□□□□ -0.9
CASP4-208ENST00000530309 WDR18Q9BV38 432 aa9.46□□□□□ -0.9
CASP4-208ENST00000530309 RNF208Q9H0X6 261 aa9.46□□□□□ -0.9
CASP4-208ENST00000530309 TLR3O15455 904 aaKnown RBP9.45□□□□□ -0.9
CASP4-208ENST00000530309 NUTM2GQ5VZR2 741 aa9.45□□□□□ -0.9
CASP4-208ENST00000530309 SLITRK4Q8IW52 837 aa9.45□□□□□ -0.9
CASP4-208ENST00000530309 NKD1Q969G9 470 aa9.45□□□□□ -0.9
CASP4-208ENST00000530309 SEC16BQ96JE7 1060 aa9.45□□□□□ -0.9
CASP4-208ENST00000530309 GMLQ99445 158 aa9.45□□□□□ -0.9
CASP4-208ENST00000530309 SNCAIPQ9Y6H5 919 aa9.45□□□□□ -0.9
CASP4-208ENST00000530309 F8W735 103 aaPredicted RBP9.44□□□□□ -0.9
CASP4-208ENST00000530309 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
CASP4-208ENST00000530309 DNAJA1P31689 397 aaKnown RBP9.44□□□□□ -0.9
CASP4-208ENST00000530309 SF3A1Q15459 793 aaKnown RBP9.44□□□□□ -0.9
CASP4-208ENST00000530309 SEZ6Q53EL9 994 aa9.44□□□□□ -0.9
CASP4-208ENST00000530309 ZC3H12AQ5D1E8 599 aaKnown RBP9.44□□□□□ -0.9
CASP4-208ENST00000530309 HDXQ7Z353 690 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms