RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TRIM42Q8IWZ5 723 aa8.06□□□□□ -1.12
CSDE1-212ENST00000529046 DUSP9Q99956 384 aaKnown RBP8.06□□□□□ -1.12
CSDE1-212ENST00000529046 SRCIN1Q9C0H9 1055 aa8.06□□□□□ -1.12
CSDE1-212ENST00000529046 HMX2A2RU54 273 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 VAMP1P23763 118 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 NFIAQ12857 509 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 MRPL58Q14197 206 aaKnown RBP8.05□□□□□ -1.12
CSDE1-212ENST00000529046 ZNF326Q5BKZ1 582 aaKnown RBP8.05□□□□□ -1.12
CSDE1-212ENST00000529046 RPS26P11Q5JNZ5 115 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-212ENST00000529046 BEND4Q6ZU67 534 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 FAM83CQ9BQN1 747 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 CORO1BQ9BR76 489 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 TRIM56Q9BRZ2 755 aaKnown RBP8.05□□□□□ -1.12
CSDE1-212ENST00000529046 OSBPL7Q9BZF2 842 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 ZFYVE1Q9HBF4 777 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 RNF19AQ9NV58 838 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 PARP2Q9UGN5 583 aa8.05□□□□□ -1.12
CSDE1-212ENST00000529046 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
CSDE1-212ENST00000529046 RNF43Q68DV7 783 aa8.04□□□□□ -1.12
CSDE1-212ENST00000529046 PPP4R2Q9NY27 417 aa8.04□□□□□ -1.12
CSDE1-212ENST00000529046 CTSBP07858 339 aa8.03□□□□□ -1.12
CSDE1-212ENST00000529046 MAP4P27816 1152 aaKnown RBP8.03□□□□□ -1.12
CSDE1-212ENST00000529046 DTHD1Q6ZMT9 781 aa8.03□□□□□ -1.12
CSDE1-212ENST00000529046 KRTAP4-12Q9BQ66 201 aa8.03□□□□□ -1.12
CSDE1-212ENST00000529046 DBNDD2Q9BQY9 259 aa8.03□□□□□ -1.12
CSDE1-212ENST00000529046 SPG7Q9UQ90 795 aa8.03□□□□□ -1.12
CSDE1-212ENST00000529046 AK5Q9Y6K8 562 aa8.03□□□□□ -1.12
CSDE1-212ENST00000529046 UNCXA6NJT0 531 aa8.02□□□□□ -1.13
CSDE1-212ENST00000529046 DRD2P14416 443 aa8.02□□□□□ -1.13
CSDE1-212ENST00000529046 RXRBP28702 533 aa8.02□□□□□ -1.13
CSDE1-212ENST00000529046 FCGRTP55899 365 aa8.02□□□□□ -1.13
CSDE1-212ENST00000529046 SOX4Q06945 474 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-212ENST00000529046 AP3B2Q13367 1082 aa8.02□□□□□ -1.13
CSDE1-212ENST00000529046 C3orf58Q8NDZ4 430 aa8.02□□□□□ -1.13
CSDE1-212ENST00000529046 BCO2Q9BYV7 579 aa8.02□□□□□ -1.13
CSDE1-212ENST00000529046 C12orf49Q9H741 205 aa8.02□□□□□ -1.13
CSDE1-212ENST00000529046 HYAL3O43820 417 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-212ENST00000529046 ECEL1O95672 775 aa8.01□□□□□ -1.13
CSDE1-212ENST00000529046 ADH5P11766 374 aa8.01□□□□□ -1.13
CSDE1-212ENST00000529046 USP11P51784 963 aa8.01□□□□□ -1.13
CSDE1-212ENST00000529046 FAAP100Q0VG06 881 aa8.01□□□□□ -1.13
CSDE1-212ENST00000529046 RAD18Q9NS91 495 aa8.01□□□□□ -1.13
CSDE1-212ENST00000529046 RSF1Q96T23 1441 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-212ENST00000529046 WIZO95785 1651 aa8.01□□□□□ -1.13
CSDE1-212ENST00000529046 CFTRP13569 1480 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 MRC2Q9UBG0 1479 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 WDR62O43379 1518 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 XRCC5P13010 732 aaKnown RBP8□□□□□ -1.13
CSDE1-212ENST00000529046 ZNF157P51786 506 aaPredicted RBP8□□□□□ -1.13
CSDE1-212ENST00000529046 PDE3AQ14432 1141 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 LDLRAD1Q5T700 205 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 NXPE4Q6UWF7 544 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 NBPF11Q86T75 865 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 ZDHHC13Q8IUH4 622 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 C2CD4AQ8NCU7 369 aaPredicted RBP8□□□□□ -1.13
CSDE1-212ENST00000529046 YIPF2Q9BWQ6 316 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 KIAA1522Q9P206 1035 aaPredicted RBP8□□□□□ -1.13
CSDE1-212ENST00000529046 FAM8A1Q9UBU6 413 aa8□□□□□ -1.13
CSDE1-212ENST00000529046 GPN3Q9UHW5 284 aaPredicted RBP8□□□□□ -1.13
CSDE1-212ENST00000529046 KIF21AQ7Z4S6 1674 aa7.99□□□□□ -1.13
CSDE1-212ENST00000529046 TGFB1P01137 390 aa7.99□□□□□ -1.13
CSDE1-212ENST00000529046 AKAP4Q5JQC9 854 aa7.99□□□□□ -1.13
CSDE1-212ENST00000529046 CDPF1Q6NVV7 123 aa7.99□□□□□ -1.13
CSDE1-212ENST00000529046 KRTAP9-9Q9BYP9 154 aa7.99□□□□□ -1.13
CSDE1-212ENST00000529046 KRTAP9-4Q9BYQ2 154 aa7.99□□□□□ -1.13
CSDE1-212ENST00000529046 AP4E1Q9UPM8 1137 aa7.99□□□□□ -1.13
CSDE1-212ENST00000529046 FAM95CA0A1B0GW59 222 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 CTSHP09668 335 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 SSTR4P31391 388 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 PPP2R3AQ06190 1150 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 SHKBP1Q8TBC3 707 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 FBLIM1Q8WUP2 373 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 MFSD14AQ96MC6 490 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 TMEM39AQ9NV64 488 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 PCMTD2Q9NV79 361 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 AKAP2Q9Y2D5 859 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 ACTL7BQ9Y614 415 aa7.98□□□□□ -1.13
CSDE1-212ENST00000529046 SORBS3O60504 671 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 EIF4BP23588 611 aaKnown RBP7.97□□□□□ -1.13
CSDE1-212ENST00000529046 GSTT1P30711 240 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 ITGAEP38570 1179 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 XPCQ01831 940 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-212ENST00000529046 PSMD2Q13200 908 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 NFKBIBQ15653 356 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 PAOXQ6QHF9 649 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 DYMQ7RTS9 669 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 FAM161BQ96MY7 647 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 PPM1HQ9ULR3 514 aa7.97□□□□□ -1.13
CSDE1-212ENST00000529046 FANCD2Q9BXW9 1451 aa7.96□□□□□ -1.13
CSDE1-212ENST00000529046 CEP164Q9UPV0 1460 aa7.96□□□□□ -1.13
CSDE1-212ENST00000529046 AOC2O75106 756 aa7.96□□□□□ -1.14
CSDE1-212ENST00000529046 COBLO75128 1261 aa7.96□□□□□ -1.14
CSDE1-212ENST00000529046 GRIK1P39086 918 aa7.96□□□□□ -1.14
CSDE1-212ENST00000529046 CD97P48960 835 aa7.96□□□□□ -1.14
CSDE1-212ENST00000529046 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
CSDE1-212ENST00000529046 GIMAP7Q8NHV1 300 aa7.96□□□□□ -1.14
CSDE1-212ENST00000529046 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-212ENST00000529046 WDR18Q9BV38 432 aa7.96□□□□□ -1.14
CSDE1-212ENST00000529046 ZC3H12CQ9C0D7 883 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms