RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 ALX1Q15699 326 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 AXDND1Q5T1B0 1012 aaPredicted RBP9.62□□□□□ -0.87
CHD7-202ENST00000524602 PIGBQ92521 554 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 GPHNQ9NQX3 736 aaPredicted RBP9.62□□□□□ -0.87
CHD7-202ENST00000524602 ASAP1Q9ULH1 1129 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 SH2B2O14492 632 aaPredicted RBP9.62□□□□□ -0.87
CHD7-202ENST00000524602 POLR3DP05423 398 aaPredicted RBP9.62□□□□□ -0.87
CHD7-202ENST00000524602 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
CHD7-202ENST00000524602 FAM89AQ96GI7 184 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 DOCK2Q92608 1830 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 TIAM2Q8IVF5 1701 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 CHD4Q14839 1912 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 METAP2P50579 478 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHD7-202ENST00000524602 CTSWP56202 376 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 UTP14CQ5TAP6 766 aaKnown RBP9.62□□□□□ -0.87
CHD7-202ENST00000524602 LDHAL6AQ6ZMR3 332 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 ELOA2Q8IYF1 753 aaPredicted RBP9.62□□□□□ -0.87
CHD7-202ENST00000524602 CCAR2Q8N163 923 aaKnown RBP9.62□□□□□ -0.87
CHD7-202ENST00000524602 VGLL2Q8N8G2 317 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 TTLL11Q8NHH1 800 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
CHD7-202ENST00000524602 NID2Q14112 1375 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 STK36Q9NRP7 1315 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.61□□□□□ -0.87
CHD7-202ENST00000524602 PFKFB1P16118 471 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 ITGA6P23229 1130 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 DPCR1Q3MIW9 517 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 SGMS1Q86VZ5 419 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 AK7Q96M32 723 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 KIF28PB7ZC32 967 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 ZBTB22O15209 634 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 SLC9C2Q5TAH2 1124 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 FILIP1Q7Z7B0 1213 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 NLRP10Q86W26 655 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 TUBE1Q9UJT0 475 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 HPSEQ9Y251 543 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 PSDA5PKW4 1024 aaPredicted RBP9.61□□□□□ -0.87
CHD7-202ENST00000524602 CCP110O43303 1012 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 U2AF2P26368 475 aaKnown RBP eCLIP9.61□□□□□ -0.872e-7■■■■□ 23.1
CHD7-202ENST00000524602 OTUD7BQ6GQQ9 843 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 APOA5Q6Q788 366 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 KIF18AQ8NI77 898 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 ALG1Q9BT22 464 aa9.61□□□□□ -0.87
CHD7-202ENST00000524602 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.61□□□□□ -0.87
CHD7-202ENST00000524602 NUP98P52948 1817 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 PDE8BO95263 885 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 LIFRP42702 1097 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 VPS37DQ86XT2 251 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 WASF1Q92558 559 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 CNNM1Q9NRU3 951 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 NRAPQ86VF7 1730 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 MROH5Q6ZUA9 1318 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 CBFA2T2O43439 604 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 SYKP43405 635 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 TRIM29Q14134 588 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 TBC1D10CQ8IV04 446 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 MTA3Q9BTC8 594 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 CNNM2Q9H8M5 875 aa9.6□□□□□ -0.87
CHD7-202ENST00000524602 ERVV-1B6SEH8 477 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 PDE8AO60658 829 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 PPFIA3O75145 1194 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 SFPQP23246 707 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD7-202ENST00000524602 ARID5BQ14865 1188 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 KRT40Q6A162 431 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 NOL10Q9BSC4 688 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 GTPBP4Q9BZE4 634 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 XPO4Q9C0E2 1151 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 GREM2Q9H772 168 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 MYO5AQ9Y4I1 1855 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 DOT1LQ8TEK3 1739 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 TCRBV5S4A2TA0A5A2 114 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 ZBTB43O43298 467 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 CUTAO60888 179 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 SMC2O95347 1197 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 NCAPHQ15003 741 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 PTPAQ15257 358 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 PUM3Q15397 648 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 RESP18Q5W5W9 173 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 PI16Q6UXB8 463 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 CYB5R4Q7L1T6 521 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 LPIN2Q92539 896 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 ERO1AQ96HE7 468 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 OGFRQ9NZT2 677 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 MROH7-TTC4A0A0A0MT08 1334 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 ZNF532Q9HCE3 1301 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 USP27XA6NNY8 438 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 EXOC5O00471 708 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 PDE6AP16499 860 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 IARSP41252 1262 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 RCAN1P53805 252 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 DMTNQ08495 405 aa9.59□□□□□ -0.87
CHD7-202ENST00000524602 GNL2Q13823 731 aaKnown RBP9.59□□□□□ -0.87
CHD7-202ENST00000524602 IGDCC4Q8TDY8 1250 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms