RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	JAG2	Q9Y219	1238 aa		7.93	□□□□□ -1.14
PCM1-223	ENST00000524356	KRT1	P04264	644 aa		7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	FAM87A	P0C7U9	286 aa		7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	CDK5R2	Q13319	367 aa		7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	KCNMB1	Q16558	191 aa		7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	AOC3	Q16853	763 aa		7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	STK32A	Q8WU08	396 aa		7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	PPP1R16B	Q96T49	567 aa		7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	LATS2	Q9NRM7	1088 aa		7.92	□□□□□ -1.14
PCM1-223	ENST00000524356	POU4F3	Q15319	338 aa		7.91	□□□□□ -1.14
PCM1-223	ENST00000524356	ZNF423	Q2M1K9	1284 aa		7.91	□□□□□ -1.14
PCM1-223	ENST00000524356	SLC23A3	Q6PIS1	610 aa		7.91	□□□□□ -1.14
PCM1-223	ENST00000524356	ANKLE2	Q86XL3	938 aa		7.91	□□□□□ -1.14
PCM1-223	ENST00000524356	PRDM7	Q9NQW5	492 aa		7.91	□□□□□ -1.14
PCM1-223	ENST00000524356	PDGFA	P04085	211 aa		7.9	□□□□□ -1.14
PCM1-223	ENST00000524356	EDN3	P14138	238 aa		7.9	□□□□□ -1.14
PCM1-223	ENST00000524356	DNM1	Q05193	864 aa	Known RBP	7.9	□□□□□ -1.14
PCM1-223	ENST00000524356	IFI16	Q16666	785 aa	Known RBP	7.9	□□□□□ -1.14
PCM1-223	ENST00000524356	C8orf34	Q49A92	452 aa		7.9	□□□□□ -1.14
PCM1-223	ENST00000524356	HRASLS5	Q96KN8	279 aa		7.9	□□□□□ -1.14
PCM1-223	ENST00000524356	RAD18	Q9NS91	495 aa		7.9	□□□□□ -1.14
PCM1-223	ENST00000524356	PLAGL2	Q9UPG8	496 aa		7.9	□□□□□ -1.14
PCM1-223	ENST00000524356	ABCC9	O60706	1549 aa		7.89	□□□□□ -1.15
PCM1-223	ENST00000524356	EIF4EBP3	O60516	100 aa	Predicted RBP	7.89	□□□□□ -1.15
PCM1-223	ENST00000524356	PCDH1	Q08174	1060 aa		7.89	□□□□□ -1.15
PCM1-223	ENST00000524356	ANGEL2	Q5VTE6	544 aa	Known RBP	7.89	□□□□□ -1.15
PCM1-223	ENST00000524356	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.89	□□□□□ -1.15
PCM1-223	ENST00000524356	TRIM56	Q9BRZ2	755 aa	Known RBP	7.89	□□□□□ -1.15
PCM1-223	ENST00000524356	CYP11A1	P05108	521 aa		7.88	□□□□□ -1.15
PCM1-223	ENST00000524356	C1QTNF9	P0C862	333 aa		7.88	□□□□□ -1.15
PCM1-223	ENST00000524356	PPP1R9A	Q9ULJ8	1098 aa		7.88	□□□□□ -1.15
PCM1-223	ENST00000524356	OXCT1	P55809	520 aa		7.87	□□□□□ -1.15
PCM1-223	ENST00000524356	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.87	□□□□□ -1.15
PCM1-223	ENST00000524356	PRR23B	Q6ZRT6	265 aa		7.87	□□□□□ -1.15
PCM1-223	ENST00000524356	SEPT3	Q9UH03	358 aa		7.87	□□□□□ -1.15
PCM1-223	ENST00000524356	AOC2	O75106	756 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	TNFRSF21	O75509	655 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	CEACAM5	P06731	702 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	INHBB	P09529	407 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	ELOA	Q14241	798 aa	Known RBP	7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	FYB2	Q5VWT5	728 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	ERICH6	Q7L0X2	663 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	WDR18	Q9BV38	432 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	MKNK2	Q9HBH9	465 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	CTNND2	Q9UQB3	1225 aa		7.86	□□□□□ -1.15
PCM1-223	ENST00000524356	PHACTR2	O75167	634 aa		7.85	□□□□□ -1.15
PCM1-223	ENST00000524356	LEFTY1	O75610	366 aa		7.85	□□□□□ -1.15
PCM1-223	ENST00000524356	PCSK2	P16519	638 aa		7.85	□□□□□ -1.15
PCM1-223	ENST00000524356	AMIGO3	Q86WK7	504 aa		7.85	□□□□□ -1.15
PCM1-223	ENST00000524356	FOXD3	Q9UJU5	478 aa	Predicted RBP	7.85	□□□□□ -1.15
PCM1-223	ENST00000524356	TMEM265	A0A087WTH1	108 aa		7.84	□□□□□ -1.15
PCM1-223	ENST00000524356		A0A096LPE4	126 aa		7.84	□□□□□ -1.15
PCM1-223	ENST00000524356		A0A1W2PPZ6	126 aa		7.84	□□□□□ -1.15
PCM1-223	ENST00000524356	MZF1	P28698	734 aa	Predicted RBP	7.83	□□□□□ -1.16
PCM1-223	ENST00000524356	CORO1B	Q9BR76	489 aa		7.83	□□□□□ -1.16
PCM1-223	ENST00000524356	ZFYVE1	Q9HBF4	777 aa		7.83	□□□□□ -1.16
PCM1-223	ENST00000524356	TMPRSS2	O15393	492 aa		7.82	□□□□□ -1.16
PCM1-223	ENST00000524356	GRIA4	P48058	902 aa		7.82	□□□□□ -1.16
PCM1-223	ENST00000524356	SPRED3	Q2MJR0	410 aa		7.82	□□□□□ -1.16
PCM1-223	ENST00000524356	SNX29	Q8TEQ0	813 aa		7.82	□□□□□ -1.16
PCM1-223	ENST00000524356	TNKS2	Q9H2K2	1166 aa		7.82	□□□□□ -1.16
PCM1-223	ENST00000524356	SYNGAP1	Q96PV0	1343 aa		7.81	□□□□□ -1.16
PCM1-223	ENST00000524356	CTSW	P56202	376 aa		7.81	□□□□□ -1.16
PCM1-223	ENST00000524356	TTC16	Q8NEE8	873 aa		7.81	□□□□□ -1.16
PCM1-223	ENST00000524356	SLAIN2	Q9P270	581 aa		7.81	□□□□□ -1.16
PCM1-223	ENST00000524356	NPIPB6	E9PJ23	425 aa		7.8	□□□□□ -1.16
PCM1-223	ENST00000524356	ITIH2	P19823	946 aa		7.8	□□□□□ -1.16
PCM1-223	ENST00000524356	TMEM164	Q5U3C3	297 aa		7.8	□□□□□ -1.16
PCM1-223	ENST00000524356	ARHGAP27	Q6ZUM4	889 aa		7.8	□□□□□ -1.16
PCM1-223	ENST00000524356	CCNJL	Q8IV13	435 aa		7.8	□□□□□ -1.16
PCM1-223	ENST00000524356	C20orf173	Q96LM9	149 aa		7.8	□□□□□ -1.16
PCM1-223	ENST00000524356	DUSP23	Q9BVJ7	150 aa		7.8	□□□□□ -1.16
PCM1-223	ENST00000524356	NFIB	O00712	420 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	B3GALT4	O96024	378 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	GLI1	P08151	1106 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	ZP2	Q05996	745 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	PDE3A	Q14432	1141 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	NOM1	Q5C9Z4	860 aa	Known RBP	7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	MPZL3	Q6UWV2	235 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	WDR89	Q96FK6	387 aa	Predicted RBP	7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	FANCD2OS	Q96PS1	177 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	TCF12	Q99081	682 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	POLI	Q9UNA4	740 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	AMOTL2	Q9Y2J4	779 aa		7.79	□□□□□ -1.16
PCM1-223	ENST00000524356	EIF1AX	P47813	144 aa	Known RBP	7.78	□□□□□ -1.16
PCM1-223	ENST00000524356	C14orf37	Q86TY3	774 aa		7.78	□□□□□ -1.16
PCM1-223	ENST00000524356	HELQ	Q8TDG4	1101 aa		7.78	□□□□□ -1.16
PCM1-223	ENST00000524356	CLP1	Q92989	425 aa	Known RBP	7.78	□□□□□ -1.16
PCM1-223	ENST00000524356	KRTAP9-8	Q9BYQ0	159 aa		7.78	□□□□□ -1.16
PCM1-223	ENST00000524356	SNX11	Q9Y5W9	270 aa		7.78	□□□□□ -1.16
PCM1-223	ENST00000524356	HOXA5	P20719	270 aa		7.77	□□□□□ -1.17
PCM1-223	ENST00000524356	AFM	P43652	599 aa		7.77	□□□□□ -1.17
PCM1-223	ENST00000524356	IKZF1	Q13422	519 aa		7.77	□□□□□ -1.17
PCM1-223	ENST00000524356	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.77	□□□□□ -1.17
PCM1-223	ENST00000524356	PIDD1	Q9HB75	910 aa		7.77	□□□□□ -1.17
PCM1-223	ENST00000524356	CD320	Q9NPF0	282 aa		7.77	□□□□□ -1.17
PCM1-223	ENST00000524356	POLR3D	P05423	398 aa	Predicted RBP	7.76	□□□□□ -1.17
PCM1-223	ENST00000524356	MPST	P25325	297 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms