RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 EZH1Q92800 747 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-209ENST00000521559 EMILIN2Q9BXX0 1053 aa5.71□□□□□ -1.5
VPS13B-209ENST00000521559 CEP44Q9C0F1 390 aa5.71□□□□□ -1.5
VPS13B-209ENST00000521559 GSTP1P09211 210 aaKnown RBP5.7□□□□□ -1.5
VPS13B-209ENST00000521559 ASPAP45381 313 aa5.7□□□□□ -1.5
VPS13B-209ENST00000521559 FAAP100Q0VG06 881 aa5.7□□□□□ -1.5
VPS13B-209ENST00000521559 COL19A1Q14993 1142 aa5.7□□□□□ -1.5
VPS13B-209ENST00000521559 CDPF1Q6NVV7 123 aa5.7□□□□□ -1.5
VPS13B-209ENST00000521559 FBLIM1Q8WUP2 373 aa5.7□□□□□ -1.5
VPS13B-209ENST00000521559 METTL22Q9BUU2 404 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-209ENST00000521559 PPM1HQ9ULR3 514 aa5.7□□□□□ -1.5
VPS13B-209ENST00000521559 AP4E1Q9UPM8 1137 aa5.7□□□□□ -1.5
VPS13B-209ENST00000521559 ACTL7BQ9Y614 415 aa5.7□□□□□ -1.5
VPS13B-209ENST00000521559 WDR64B1ANS9 1081 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 TGFB1P01137 390 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 CTSBP07858 339 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 SSTR4P31391 388 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 CD97P48960 835 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 SND1Q7KZF4 910 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS13B-209ENST00000521559 MFSD14AQ96MC6 490 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 WDR18Q9BV38 432 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 OSBPL1AQ9BXW6 950 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 ATXN3LQ9H3M9 355 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 LEMD3Q9Y2U8 911 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 SCRIBQ14160 1630 aa5.69□□□□□ -1.5
VPS13B-209ENST00000521559 ECEL1O95672 775 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 RAB6AP20340 208 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 NME2P22392 152 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 ARNTP27540 789 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 CYP27A1Q02318 531 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 SULF2Q8IWU5 870 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 FBXL6Q8N531 539 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 KCNB2Q92953 911 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 ZC3H12CQ9C0D7 883 aaKnown RBP5.68□□□□□ -1.5
VPS13B-209ENST00000521559 GSX1Q9H4S2 264 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-209ENST00000521559 CCDC86Q9H6F5 360 aaKnown RBP5.68□□□□□ -1.5
VPS13B-209ENST00000521559 PIDD1Q9HB75 910 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 PIM2Q9P1W9 311 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 FAM8A1Q9UBU6 413 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 SHROOM4Q9ULL8 1493 aa5.68□□□□□ -1.5
VPS13B-209ENST00000521559 PRR19A6NJB7 356 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 KIAA1324LA8MWY0 1029 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-209ENST00000521559 LDHBP07195 334 aaKnown RBP5.67□□□□□ -1.5
VPS13B-209ENST00000521559 NFICP08651 508 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 LIG1P18858 919 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 ID3Q02535 119 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 KIF4BQ2VIQ3 1234 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 DUSP27Q5VZP5 1158 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 ANKRD24Q8TF21 1146 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 TBC1D32Q96NH3 1257 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 NECAB3Q96P71 396 aaPredicted RBP5.67□□□□□ -1.5
VPS13B-209ENST00000521559 ACSS3Q9H6R3 686 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 C12orf49Q9H741 205 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 PRKAG2Q9UGJ0 569 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 BICRAQ9NZM4 1560 aa5.67□□□□□ -1.5
VPS13B-209ENST00000521559 F13BP05160 661 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 P4HBP07237 508 aaKnown RBP5.66□□□□□ -1.5
VPS13B-209ENST00000521559 LRRC14Q15048 493 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 EAPPQ56P03 285 aaPredicted RBP5.66□□□□□ -1.5
VPS13B-209ENST00000521559 SCARA3Q6AZY7 606 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 ZAR1Q86SH2 424 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 SEMA6CQ9H3T2 930 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 CBX8Q9HC52 389 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 FAM105AQ9NUU6 356 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 CRIM1Q9NZV1 1036 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 WWC3Q9ULE0 1092 aa5.66□□□□□ -1.5
VPS13B-209ENST00000521559 TMPRSS2O15393 492 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 ZNF862O60290 1169 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 PRPF40AO75400 957 aaKnown RBP5.65□□□□□ -1.5
VPS13B-209ENST00000521559 FOSL1P15407 271 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 TPTE2Q6XPS3 522 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 PDZD3Q86UT5 571 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 ACSBG1Q96GR2 724 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 OSBPL7Q9BZF2 842 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 PPP1R9AQ9ULJ8 1098 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 DAGLAQ9Y4D2 1042 aa5.65□□□□□ -1.5
VPS13B-209ENST00000521559 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
VPS13B-209ENST00000521559 EIF4BP23588 611 aaKnown RBP5.64□□□□□ -1.51
VPS13B-209ENST00000521559 GNA15P30679 374 aa5.64□□□□□ -1.51
VPS13B-209ENST00000521559 CYP27C1Q4G0S4 372 aa5.64□□□□□ -1.51
VPS13B-209ENST00000521559 MAP1SQ66K74 1059 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-209ENST00000521559 DTX1Q86Y01 620 aa5.64□□□□□ -1.51
VPS13B-209ENST00000521559 WDR89Q96FK6 387 aaPredicted RBP5.64□□□□□ -1.51
VPS13B-209ENST00000521559 FANCD2OSQ96PS1 177 aa5.64□□□□□ -1.51
VPS13B-209ENST00000521559 CYP8B1Q9UNU6 501 aa5.64□□□□□ -1.51
VPS13B-209ENST00000521559 CYP26A1O43174 497 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 RNGTTO60942 597 aaKnown RBP5.63□□□□□ -1.51
VPS13B-209ENST00000521559 TRIM37O94972 964 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 WNT11O96014 354 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 USP17L7P0C7H9 530 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 SPINK2P20155 84 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 ITGAEP38570 1179 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 LLGL2Q6P1M3 1020 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 SMYD4Q8IYR2 804 aaPredicted RBP5.63□□□□□ -1.51
VPS13B-209ENST00000521559 SETDB2Q96T68 719 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 PCOLCE2Q9UKZ9 415 aa5.63□□□□□ -1.51
VPS13B-209ENST00000521559 ENC1O14682 589 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 MED26O95402 600 aa5.62□□□□□ -1.51
VPS13B-209ENST00000521559 ERCC3P19447 782 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms