RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RASA3Q14644 834 aa9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 STRIP1Q5VSL9 837 aa9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 POTEEQ6S8J3 1075 aa9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 SEC31BQ9NQW1 1179 aa9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 ANKIB1Q9P2G1 1089 aa9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 THEGQ9P2T0 379 aa9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 WDFY4Q6ZS81 3184 aa9.63□□□□□ -0.87
CTNNA1-227ENST00000521387 SPDYE5A6NIY4 337 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 IRF6O14896 467 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 GPR37L1O60883 481 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 MAP3K9P80192 1104 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 IRF5Q13568 498 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 MTMR14Q8NCE2 650 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 PPM1EQ8WY54 764 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 RNF166Q96A37 237 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 PRMT6Q96LA8 375 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 TEPSINQ96N21 525 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 PANK3Q9H999 370 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 OGDHLQ9ULD0 1010 aa9.62□□□□□ -0.87
CTNNA1-227ENST00000521387 MYO3BQ8WXR4 1341 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 FAM86C2PA6NEL3 165 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 DIAPH1O60610 1272 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 WDHD1O75717 1129 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 MMP14P50281 582 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 FCGRTP55899 365 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 TRIM32Q13049 653 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 MOGSQ13724 837 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 PROSER3Q2NL68 480 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 TXNRD3Q86VQ6 643 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 SNCAIPQ9Y6H5 919 aa9.61□□□□□ -0.87
CTNNA1-227ENST00000521387 REV3LO60673 3130 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 DOCK3Q8IZD9 2030 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 CCER2I3L3R5 266 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 ANP32CO43423 234 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 ANXA1P04083 346 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 NHLH1Q02575 133 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 DLGAP5Q15398 846 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 CERS5Q8N5B7 392 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 FAM89AQ96GI7 184 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 USP34Q70CQ2 3546 aa9.6□□□□□ -0.87
CTNNA1-227ENST00000521387 CACNA1BQ00975 2339 aa9.59□□□□□ -0.87
CTNNA1-227ENST00000521387 MYO9BQ13459 2157 aa9.59□□□□□ -0.87
CTNNA1-227ENST00000521387 PDHXO00330 501 aa9.59□□□□□ -0.87
CTNNA1-227ENST00000521387 EIF4A1P60842 406 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-227ENST00000521387 SNAPC2Q13487 334 aa9.59□□□□□ -0.87
CTNNA1-227ENST00000521387 TTLL5Q6EMB2 1281 aa9.59□□□□□ -0.87
CTNNA1-227ENST00000521387 ANKRD23Q86SG2 305 aa9.59□□□□□ -0.87
CTNNA1-227ENST00000521387 MGAMO43451 1857 aa9.59□□□□□ -0.87
CTNNA1-227ENST00000521387 ATP2B4P23634 1241 aa9.58□□□□□ -0.88
CTNNA1-227ENST00000521387 TAF7Q15545 349 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-227ENST00000521387 ZBTB38Q8NAP3 1195 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-227ENST00000521387 LBHD1Q9BQE6 289 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-227ENST00000521387 VEZTQ9HBM0 779 aa9.58□□□□□ -0.88
CTNNA1-227ENST00000521387 XDHP47989 1333 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 SPTBN4Q9H254 2564 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 CHD9Q3L8U1 2897 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 CYP2C8P10632 490 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 PSEN1P49768 467 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 PPIL2Q13356 520 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 ADGRE1Q14246 886 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 CFAP100Q494V2 611 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 HSP90AB3PQ58FF7 597 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 AKNAD1Q5T1N1 836 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 ERO1BQ86YB8 467 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 MED23Q9ULK4 1368 aa9.57□□□□□ -0.88
CTNNA1-227ENST00000521387 SMIM22K7EJ46 135 aa9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 KLRK1P26718 216 aa9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 GTF2IP78347 998 aa9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 CCDC85BQ15834 202 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 GPAT2Q6NUI2 795 aa9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 COPS6Q7L5N1 327 aa9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 ZKSCAN4Q969J2 545 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 COA1Q9GZY4 146 aa9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 CSADQ9Y600 493 aa9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 PKD1L2Q7Z442 2459 aa9.56□□□□□ -0.88
CTNNA1-227ENST00000521387 LTBP2Q14767 1821 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 U2AF1L5P0DN76 240 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 KCNQ1P51787 676 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 U2AF1Q01081 240 aaKnown RBP eCLIP9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 TFF2Q03403 129 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 ZNF467Q7Z7K2 595 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 ZNF710Q8N1W2 664 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 POLR3GLQ9BT43 218 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 ISCA1Q9BUE6 129 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 TMEM39BQ9GZU3 492 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 ZNF576Q9H609 170 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 TAOK2Q9UL54 1235 aa9.55□□□□□ -0.88
CTNNA1-227ENST00000521387 IRS4O14654 1257 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 U2SURPO15042 1029 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-227ENST00000521387 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms