RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 LGR6Q9HBX8 967 aa8.45□□□□□ -1.06
CLK4-207ENST00000520909 EGFL7Q9UHF1 273 aa8.45□□□□□ -1.06
CLK4-207ENST00000520909 SYNGAP1Q96PV0 1343 aa8.44□□□□□ -1.06
CLK4-207ENST00000520909 DYNC1LI2O43237 492 aaPredicted RBP8.44□□□□□ -1.06
CLK4-207ENST00000520909 STK11IPQ8N1F8 1099 aa8.44□□□□□ -1.06
CLK4-207ENST00000520909 BCL7CQ8WUZ0 217 aaPredicted RBP8.44□□□□□ -1.06
CLK4-207ENST00000520909 CPNE3O75131 537 aaKnown RBP8.43□□□□□ -1.06
CLK4-207ENST00000520909 PTPN12Q05209 780 aaKnown RBP8.43□□□□□ -1.06
CLK4-207ENST00000520909 PDE3BQ13370 1112 aa8.43□□□□□ -1.06
CLK4-207ENST00000520909 PLCL1Q15111 1095 aa8.43□□□□□ -1.06
CLK4-207ENST00000520909 WDR18Q9BV38 432 aa8.43□□□□□ -1.06
CLK4-207ENST00000520909 PPP1R9AQ9ULJ8 1098 aa8.43□□□□□ -1.06
CLK4-207ENST00000520909 BIN1O00499 593 aa8.42□□□□□ -1.06
CLK4-207ENST00000520909 C8AP07357 584 aa8.42□□□□□ -1.06
CLK4-207ENST00000520909 SLFN14P0C7P3 912 aa8.42□□□□□ -1.06
CLK4-207ENST00000520909 GLYCTKQ8IVS8 523 aa8.42□□□□□ -1.06
CLK4-207ENST00000520909 NDUFB5O43674 189 aa8.41□□□□□ -1.06
CLK4-207ENST00000520909 B4GALNT3Q6L9W6 998 aa8.41□□□□□ -1.06
CLK4-207ENST00000520909 MISP3Q96FF7 219 aa8.41□□□□□ -1.06
CLK4-207ENST00000520909 PIDD1Q9HB75 910 aa8.41□□□□□ -1.06
CLK4-207ENST00000520909 NPHS2Q9NP85 383 aa8.41□□□□□ -1.06
CLK4-207ENST00000520909 H3BRB1 525 aa8.4□□□□□ -1.06
CLK4-207ENST00000520909 LIG1P18858 919 aa8.4□□□□□ -1.06
CLK4-207ENST00000520909 ORC1Q13415 861 aa8.4□□□□□ -1.06
CLK4-207ENST00000520909 RPS26P11Q5JNZ5 115 aaPredicted RBP8.4□□□□□ -1.06
CLK4-207ENST00000520909 LCE4AQ5TA78 99 aa8.4□□□□□ -1.06
CLK4-207ENST00000520909 SPRED2Q7Z698 418 aa8.4□□□□□ -1.06
CLK4-207ENST00000520909 TUT1Q9H6E5 874 aaKnown RBP8.4□□□□□ -1.06
CLK4-207ENST00000520909 HNRNPUQ00839 825 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLK4-207ENST00000520909 ZNF792Q3KQV3 632 aa8.39□□□□□ -1.07
CLK4-207ENST00000520909 CITED4Q96RK1 184 aa8.39□□□□□ -1.07
CLK4-207ENST00000520909 ATXN3LQ9H3M9 355 aa8.39□□□□□ -1.07
CLK4-207ENST00000520909 CRIM1Q9NZV1 1036 aa8.39□□□□□ -1.07
CLK4-207ENST00000520909 NISCHQ9Y2I1 1504 aa8.38□□□□□ -1.07
CLK4-207ENST00000520909 TMPRSS2O15393 492 aa8.38□□□□□ -1.07
CLK4-207ENST00000520909 GADD45BO75293 160 aaPredicted RBP8.38□□□□□ -1.07
CLK4-207ENST00000520909 PAPLNO95428 1278 aa8.38□□□□□ -1.07
CLK4-207ENST00000520909 BNIP3Q12983 259 aa8.38□□□□□ -1.07
CLK4-207ENST00000520909 ECM1Q16610 540 aa8.38□□□□□ -1.07
CLK4-207ENST00000520909 ZNF574Q6ZN55 896 aaPredicted RBP8.38□□□□□ -1.07
CLK4-207ENST00000520909 NETO1Q8TDF5 533 aa8.38□□□□□ -1.07
CLK4-207ENST00000520909 CCDC74AQ96AQ1 378 aa8.38□□□□□ -1.07
CLK4-207ENST00000520909 ZC3H12CQ9C0D7 883 aaKnown RBP8.38□□□□□ -1.07
CLK4-207ENST00000520909 CCDC86Q9H6F5 360 aaKnown RBP8.38□□□□□ -1.07
CLK4-207ENST00000520909 ABCB6Q9NP58 842 aa8.38□□□□□ -1.07
CLK4-207ENST00000520909 TMEM238LA0A1B0GVL6 79 aa8.37□□□□□ -1.07
CLK4-207ENST00000520909 FAM87AP0C7U9 286 aa8.37□□□□□ -1.07
CLK4-207ENST00000520909 ZNF157P51786 506 aaPredicted RBP8.37□□□□□ -1.07
CLK4-207ENST00000520909 ID3Q02535 119 aa8.37□□□□□ -1.07
CLK4-207ENST00000520909 CDK5R2Q13319 367 aa8.37□□□□□ -1.07
CLK4-207ENST00000520909 WDR89Q96FK6 387 aaPredicted RBP8.37□□□□□ -1.07
CLK4-207ENST00000520909 FANCD2OSQ96PS1 177 aa8.37□□□□□ -1.07
CLK4-207ENST00000520909 FAM129BQ96TA1 746 aa8.37□□□□□ -1.07
CLK4-207ENST00000520909 DNAJC25Q9H1X3 360 aa8.37□□□□□ -1.07
CLK4-207ENST00000520909 TRAK1Q9UPV9 953 aa8.37□□□□□ -1.07
CLK4-207ENST00000520909 SERPINB4P48594 390 aa8.36□□□□□ -1.07
CLK4-207ENST00000520909 ARHGAP4P98171 946 aa8.36□□□□□ -1.07
CLK4-207ENST00000520909 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
CLK4-207ENST00000520909 SMYD4Q8IYR2 804 aaPredicted RBP8.36□□□□□ -1.07
CLK4-207ENST00000520909 PLD6Q8N2A8 252 aaKnown RBP8.36□□□□□ -1.07
CLK4-207ENST00000520909 TMC1Q8TDI8 760 aa8.36□□□□□ -1.07
CLK4-207ENST00000520909 EIF1AYO14602 144 aaKnown RBP8.35□□□□□ -1.07
CLK4-207ENST00000520909 NIF3L1Q9GZT8 377 aa8.35□□□□□ -1.07
CLK4-207ENST00000520909 PPP4R2Q9NY27 417 aa8.35□□□□□ -1.07
CLK4-207ENST00000520909 VAV3Q9UKW4 847 aa8.35□□□□□ -1.07
CLK4-207ENST00000520909 USTQ9Y2C2 406 aa8.35□□□□□ -1.07
CLK4-207ENST00000520909 ZNF862O60290 1169 aa8.34□□□□□ -1.07
CLK4-207ENST00000520909 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
CLK4-207ENST00000520909 CD8BP10966 210 aa8.34□□□□□ -1.07
CLK4-207ENST00000520909 FUT4P22083 530 aa8.34□□□□□ -1.07
CLK4-207ENST00000520909 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.07
CLK4-207ENST00000520909 WFDC3Q8IUB2 231 aa8.34□□□□□ -1.07
CLK4-207ENST00000520909 FAM181AQ8N9Y4 354 aa8.34□□□□□ -1.07
CLK4-207ENST00000520909 DISC1Q9NRI5 854 aa8.34□□□□□ -1.07
CLK4-207ENST00000520909 KRT82Q9NSB4 513 aa8.34□□□□□ -1.07
CLK4-207ENST00000520909 GSTP1P09211 210 aaKnown RBP8.33□□□□□ -1.08
CLK4-207ENST00000520909 PRKCQQ04759 706 aa8.33□□□□□ -1.08
CLK4-207ENST00000520909 PPP2R3AQ06190 1150 aa8.33□□□□□ -1.08
CLK4-207ENST00000520909 FAAP100Q0VG06 881 aa8.33□□□□□ -1.08
CLK4-207ENST00000520909 KIF4BQ2VIQ3 1234 aa8.33□□□□□ -1.08
CLK4-207ENST00000520909 ARHGAP27Q6ZUM4 889 aa8.33□□□□□ -1.08
CLK4-207ENST00000520909 PCOLCE2Q9UKZ9 415 aa8.33□□□□□ -1.08
CLK4-207ENST00000520909 TTLL4Q14679 1199 aa8.32□□□□□ -1.08
CLK4-207ENST00000520909 ZNF648Q5T619 568 aaPredicted RBP8.32□□□□□ -1.08
CLK4-207ENST00000520909 DTHD1Q6ZMT9 781 aa8.32□□□□□ -1.08
CLK4-207ENST00000520909 PI4K2BQ8TCG2 481 aa8.32□□□□□ -1.08
CLK4-207ENST00000520909 KRTAP4-11Q9BYQ6 195 aa8.32□□□□□ -1.08
CLK4-207ENST00000520909 RC3H2Q9HBD1 1191 aaKnown RBP8.32□□□□□ -1.08
CLK4-207ENST00000520909 MKNK2Q9HBH9 465 aa8.32□□□□□ -1.08
CLK4-207ENST00000520909 SSU72Q9NP77 194 aaKnown RBP8.32□□□□□ -1.08
CLK4-207ENST00000520909 CARMIL2Q6F5E8 1435 aa8.32□□□□□ -1.08
CLK4-207ENST00000520909 GRM2Q14416 872 aa8.31□□□□□ -1.08
CLK4-207ENST00000520909 IFI16Q16666 785 aaKnown RBP8.31□□□□□ -1.08
CLK4-207ENST00000520909 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
CLK4-207ENST00000520909 KCNB2Q92953 911 aa8.31□□□□□ -1.08
CLK4-207ENST00000520909 C1orf115Q9H7X2 142 aa8.31□□□□□ -1.08
CLK4-207ENST00000520909 TMEM39AQ9NV64 488 aa8.31□□□□□ -1.08
CLK4-207ENST00000520909 FARP2O94887 1054 aaPredicted RBP8.3□□□□□ -1.08
CLK4-207ENST00000520909 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
CLK4-207ENST00000520909 AOC3Q16853 763 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms