RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 PTPN12Q05209 780 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 SOX4Q06945 474 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 POU4F3Q15319 338 aa5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 DNAJC14Q6Y2X3 702 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 TMC7Q7Z402 723 aa5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 SHISA5Q8N114 240 aa5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 GIMAP7Q8NHV1 300 aa5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 TMC1Q8TDI8 760 aa5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 EPS8L3Q8TE67 593 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 CYP11A1P05108 521 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 FAAP100Q0VG06 881 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 GRM2Q14416 872 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 PI16Q6UXB8 463 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 FBXL6Q8N531 539 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 FBLIM1Q8WUP2 373 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 EZH1Q92800 747 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 ASB16Q96NS5 453 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 CCDC9Q9Y3X0 531 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 ACTL7BQ9Y614 415 aa5.64□□□□□ -1.51
TRAPPC13-212ENST00000520525 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 FAM95CA0A1B0GW59 222 aa5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 GADD45BO75293 160 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 RXRBP28702 533 aa5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 DSC3Q14574 896 aa5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 CPSF6Q16630 551 aaKnown RBP eCLIP5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 VSIG10LQ86VR7 867 aa5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 ZSCAN29Q8IWY8 852 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 TP53INP2Q8IXH6 220 aa5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 OSBPL1AQ9BXW6 950 aa5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
TRAPPC13-212ENST00000520525 RPS26P11Q5JNZ5 115 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-212ENST00000520525 GATA6Q92908 595 aa5.62□□□□□ -1.51
TRAPPC13-212ENST00000520525 CORO1BQ9BR76 489 aa5.62□□□□□ -1.51
TRAPPC13-212ENST00000520525 ANKRD33BA6NCL7 494 aa5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 TREHO43280 583 aa5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 ADMP35318 185 aa5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 USP11P51784 963 aa5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 WDR18Q9BV38 432 aa5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 GSX1Q9H4S2 264 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 FAM105AQ9NUU6 356 aa5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 PRKAG2Q9UGJ0 569 aa5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 TRAK1Q9UPV9 953 aa5.61□□□□□ -1.51
TRAPPC13-212ENST00000520525 ERCC3P19447 782 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 ZNF157P51786 506 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 AP3B2Q13367 1082 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 NFKBIBQ15653 356 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 ENOX2Q16206 610 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 FBLN7Q53RD9 439 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 AKAP4Q5JQC9 854 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 HP1BP3Q5SSJ5 553 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 PAOXQ6QHF9 649 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 NPAS4Q8IUM7 802 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 RGS22Q8NE09 1264 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 DDX54Q8TDD1 881 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 WDR89Q96FK6 387 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 SEMA6CQ9H3T2 930 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 ACSS3Q9H6R3 686 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 PAK6Q9NQU5 681 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 BSDC1Q9NW68 430 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 AP4E1Q9UPM8 1137 aa5.6□□□□□ -1.51
TRAPPC13-212ENST00000520525 SYNGAP1Q96PV0 1343 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 PNMA6FA0A0J9YX94 578 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 CYP26A1O43174 497 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 AOC2O75106 756 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 NFICP08651 508 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 RAB6AP20340 208 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 FCGRTP55899 365 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 PDE3AQ14432 1141 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 ZNF648Q5T619 568 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 DYMQ7RTS9 669 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 ZAR1Q86SH2 424 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 BCO2Q9BYV7 579 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 CCDC86Q9H6F5 360 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 ZFYVE1Q9HBF4 777 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 PPP1R9AQ9ULJ8 1098 aa5.59□□□□□ -1.51
TRAPPC13-212ENST00000520525 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 FAM170BA6NMN3 283 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 TMPRSS2O15393 492 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 PLCB3Q01970 1234 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 FMR1Q06787 632 aaKnown RBP eCLIP5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 SEZ6L2Q6UXD5 910 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 DTHD1Q6ZMT9 781 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 PDZD3Q86UT5 571 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 AGBL5Q8NDL9 886 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 TBC1D32Q96NH3 1257 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 METTL22Q9BUU2 404 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 YIPF2Q9BWQ6 316 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 KRTAP4-5Q9BYR2 181 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 RAD18Q9NS91 495 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 NLRP2Q9NX02 1062 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 PCDHGC5Q9Y5F6 944 aa5.58□□□□□ -1.52
TRAPPC13-212ENST00000520525 DBX1A6NMT0 343 aa5.57□□□□□ -1.52
TRAPPC13-212ENST00000520525 DYNC1LI2O43237 492 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC13-212ENST00000520525 ZNF862O60290 1169 aa5.57□□□□□ -1.52
TRAPPC13-212ENST00000520525 PAPLNO95428 1278 aa5.57□□□□□ -1.52
TRAPPC13-212ENST00000520525 P4HBP07237 508 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-212ENST00000520525 GSTP1P09211 210 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-212ENST00000520525 LIG1P18858 919 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms