RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 SUPT20HQ8NEM7 779 aa19.02■□□□□ 0.64
SNHG6-201ENST00000520348 NCOA7Q8NI08 942 aa19.02■□□□□ 0.64
SNHG6-201ENST00000520348 STAG1Q8WVM7 1258 aa19.02■□□□□ 0.64
SNHG6-201ENST00000520348 TPCN1Q9ULQ1 816 aa19.02■□□□□ 0.64
SNHG6-201ENST00000520348 JAG2Q9Y219 1238 aa19.02■□□□□ 0.64
SNHG6-201ENST00000520348 ZBTB7AO95365 584 aa19.01■□□□□ 0.63
SNHG6-201ENST00000520348 APPP05067 770 aa19.01■□□□□ 0.63
SNHG6-201ENST00000520348 POLD1P28340 1107 aa19.01■□□□□ 0.63
SNHG6-201ENST00000520348 KIAA2012Q0VF49 1180 aa19.01■□□□□ 0.63
SNHG6-201ENST00000520348 RAB3GAP1Q15042 981 aa19.01■□□□□ 0.63
SNHG6-201ENST00000520348 ME3Q16798 604 aa19.01■□□□□ 0.63
SNHG6-201ENST00000520348 PSMD1Q99460 953 aa19.01■□□□□ 0.63
SNHG6-201ENST00000520348 CRNKL1Q9BZJ0 848 aaKnown RBP19.01■□□□□ 0.63
SNHG6-201ENST00000520348 MKRN1Q9UHC7 482 aaKnown RBP19.01■□□□□ 0.63
SNHG6-201ENST00000520348 MYH2Q9UKX2 1941 aa19.01■□□□□ 0.63
SNHG6-201ENST00000520348 GPR75-ASB3A0A0A6YYF3 556 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 RIMBP2O15034 1052 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 FGRP09769 529 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 TDO2P48775 406 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 ANTXR2P58335 489 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 CCDC93Q567U6 631 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 NOL8Q76FK4 1167 aaKnown RBP19■□□□□ 0.63
SNHG6-201ENST00000520348 SDR42E1Q8WUS8 393 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 TCEANC2Q96MN5 208 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 ATP8A2Q9NTI2 1148 aa19■□□□□ 0.63
SNHG6-201ENST00000520348 SCN9AQ15858 1988 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 MCM5P33992 734 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 GTF2IP78347 998 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
SNHG6-201ENST00000520348 SBK1Q52WX2 424 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 Q6ZUG5 572 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 SLF2Q8IX21 1173 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 CERS5Q8N5B7 392 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 MTA3Q9BTC8 594 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 FOXD4L1Q9NU39 408 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 AATFQ9NY61 560 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNHG6-201ENST00000520348 TACC3Q9Y6A5 838 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 CDK5RAP2Q96SN8 1893 aa18.99■□□□□ 0.63
SNHG6-201ENST00000520348 FOCADQ5VW36 1801 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 PCP11498 1178 aaKnown RBP18.98■□□□□ 0.63
SNHG6-201ENST00000520348 NUCB2P80303 420 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 PPARAQ07869 468 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 DIXDC1Q155Q3 683 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 AKNAD1Q5T1N1 836 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 RALYLQ86SE5 291 aaKnown RBP18.98■□□□□ 0.63
SNHG6-201ENST00000520348 RTKN2Q8IZC4 609 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 VPS33BQ9H267 617 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 CNNM2Q9H8M5 875 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 DCP1AQ9NPI6 582 aaPredicted RBP18.98■□□□□ 0.63
SNHG6-201ENST00000520348 NEDD4P46934 1319 aa18.98■□□□□ 0.63
SNHG6-201ENST00000520348 NAV1Q8NEY1 1877 aa18.97■□□□□ 0.63
SNHG6-201ENST00000520348 ROBO3Q96MS0 1386 aa18.97■□□□□ 0.63
SNHG6-201ENST00000520348 BAG3O95817 575 aa18.97■□□□□ 0.63
SNHG6-201ENST00000520348 PTGER2P43116 358 aa18.97■□□□□ 0.63
SNHG6-201ENST00000520348 STRIP1Q5VSL9 837 aa18.97■□□□□ 0.63
SNHG6-201ENST00000520348 CLEC17AQ6ZS10 378 aa18.97■□□□□ 0.63
SNHG6-201ENST00000520348 RNF41Q9H4P4 317 aaPredicted RBP18.97■□□□□ 0.63
SNHG6-201ENST00000520348 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.97■□□□□ 0.63
SNHG6-201ENST00000520348 CD2APQ9Y5K6 639 aa18.97■□□□□ 0.63
SNHG6-201ENST00000520348 BAZ2AQ9UIF9 1905 aaKnown RBP18.96■□□□□ 0.63
SNHG6-201ENST00000520348 PRC1O43663 620 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 C21orf2O43822 256 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 NT5C2P49902 561 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 TRDNQ13061 729 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 DOK7Q18PE1 504 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 NKX2-3Q8TAU0 364 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 BRF1Q92994 677 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 GTF3C6Q969F1 213 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 ZNF274Q96GC6 653 aaPredicted RBP18.96■□□□□ 0.63
SNHG6-201ENST00000520348 MRIQ9BWK5 157 aa18.96■□□□□ 0.63
SNHG6-201ENST00000520348 ARPP21Q9UBL0 812 aaPredicted RBP18.96■□□□□ 0.63
SNHG6-201ENST00000520348 ATF5Q9Y2D1 282 aaPredicted RBP18.96■□□□□ 0.63
SNHG6-201ENST00000520348 FER1L6Q2WGJ9 1857 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 ECE2O60344 883 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 PFKFB2O60825 505 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 PLCG2P16885 1265 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 RHBDL3P58872 404 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 DACT2Q5SW24 774 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 CTR9Q6PD62 1173 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 TMEM87BQ96K49 555 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 LARP6Q9BRS8 491 aaKnown RBP18.95■□□□□ 0.62
SNHG6-201ENST00000520348 KRT23Q9C075 422 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 PIM2Q9P1W9 311 aa18.95■□□□□ 0.62
SNHG6-201ENST00000520348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.95■□□□□ 0.62
SNHG6-201ENST00000520348 SH2B2O14492 632 aaPredicted RBP18.94■□□□□ 0.62
SNHG6-201ENST00000520348 BTDP43251 543 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 HDLBPQ00341 1268 aaKnown RBP18.94■□□□□ 0.62
SNHG6-201ENST00000520348 CTDSPL2Q05D32 466 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 NFKBIBQ15653 356 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 CYB5R4Q7L1T6 521 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 CCDC83Q8IWF9 413 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 SH3RF3Q8TEJ3 882 aaPredicted RBP18.94■□□□□ 0.62
SNHG6-201ENST00000520348 LRRC2Q9BYS8 371 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 DBNDD1Q9H9R9 158 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 DAGLAQ9Y4D2 1042 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 COL4A5P29400 1685 aa18.94■□□□□ 0.62
SNHG6-201ENST00000520348 NID2Q14112 1375 aa18.93■□□□□ 0.62
SNHG6-201ENST00000520348 ORC4O43929 436 aa18.93■□□□□ 0.62
SNHG6-201ENST00000520348 AOC3Q16853 763 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms