RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 CBX8Q9HC52 389 aa6.61□□□□□ -1.35
SKP1-205ENST00000519054 STOML1Q9UBI4 398 aa6.61□□□□□ -1.35
SKP1-205ENST00000519054 AP4E1Q9UPM8 1137 aa6.61□□□□□ -1.35
SKP1-205ENST00000519054 HMX2A2RU54 273 aa6.6□□□□□ -1.35
SKP1-205ENST00000519054 RXRBP28702 533 aa6.6□□□□□ -1.35
SKP1-205ENST00000519054 USP11P51784 963 aa6.6□□□□□ -1.35
SKP1-205ENST00000519054 MFAP1P55081 439 aaKnown RBP6.6□□□□□ -1.35
SKP1-205ENST00000519054 MAP1SQ66K74 1059 aaPredicted RBP6.6□□□□□ -1.35
SKP1-205ENST00000519054 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
SKP1-205ENST00000519054 DYMQ7RTS9 669 aa6.6□□□□□ -1.35
SKP1-205ENST00000519054 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
SKP1-205ENST00000519054 BCL2L13Q9BXK5 485 aa6.6□□□□□ -1.35
SKP1-205ENST00000519054 ACTL7BQ9Y614 415 aa6.6□□□□□ -1.35
SKP1-205ENST00000519054 ZNF862O60290 1169 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 FSTP19883 344 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 MAP4P27816 1152 aaKnown RBP6.59□□□□□ -1.35
SKP1-205ENST00000519054 MEI1Q5TIA1 1274 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 TMC4Q7Z404 712 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 GRIN3AQ8TCU5 1115 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 GIPC2Q8TF65 315 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 EMILIN2Q9BXX0 1053 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 C7orf69Q9H7B7 122 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 HIF3AQ9Y2N7 669 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 SAMM50Q9Y512 469 aa6.59□□□□□ -1.35
SKP1-205ENST00000519054 RAB6AP20340 208 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 BMP6P22004 513 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 RASIP1Q5U651 963 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 MPRIPQ6WCQ1 1025 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 CLEC10AQ8IUN9 316 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 ANKRD24Q8TF21 1146 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 FBLIM1Q8WUP2 373 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 MRS2Q9HD23 443 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 KRT82Q9NSB4 513 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 PPP1R9AQ9ULJ8 1098 aa6.58□□□□□ -1.36
SKP1-205ENST00000519054 SORBS3O60504 671 aa6.57□□□□□ -1.36
SKP1-205ENST00000519054 HNRNPUQ00839 825 aaKnown RBP eCLIP6.57□□□□□ -1.36
SKP1-205ENST00000519054 ZNF252P-AS1Q0IIN9 211 aa6.57□□□□□ -1.36
SKP1-205ENST00000519054 CCDC85BQ15834 202 aaPredicted RBP6.57□□□□□ -1.36
SKP1-205ENST00000519054 KIF4BQ2VIQ3 1234 aa6.57□□□□□ -1.36
SKP1-205ENST00000519054 SV2BQ7L1I2 683 aa6.57□□□□□ -1.36
SKP1-205ENST00000519054 ACSBG1Q96GR2 724 aa6.57□□□□□ -1.36
SKP1-205ENST00000519054 FAM83CQ9BQN1 747 aa6.57□□□□□ -1.36
SKP1-205ENST00000519054 FAM105AQ9NUU6 356 aa6.57□□□□□ -1.36
SKP1-205ENST00000519054 VTI1BQ9UEU0 232 aa6.57□□□□□ -1.36
SKP1-205ENST00000519054 TMPRSS2O15393 492 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 IGLV1-40P01703 118 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 CTSHP09668 335 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 SLFN14P0C7P3 912 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 ASPAP45381 313 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 ID3Q02535 119 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 NFKBIBQ15653 356 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 LLGL2Q6P1M3 1020 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 GPBAR1Q8TDU6 330 aa6.56□□□□□ -1.36
SKP1-205ENST00000519054 SYNGAP1Q96PV0 1343 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 NFICP08651 508 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 NFIAQ12857 509 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 LRRC14Q15048 493 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 MAP3K11Q16584 847 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 ZNF326Q5BKZ1 582 aaKnown RBP6.55□□□□□ -1.36
SKP1-205ENST00000519054 ZMYM1Q5SVZ6 1142 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 RNF43Q68DV7 783 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 TTBK2Q6IQ55 1244 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 CRIM1Q9NZV1 1036 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 PCDHGC5Q9Y5F6 944 aa6.55□□□□□ -1.36
SKP1-205ENST00000519054 GSC2O15499 205 aa6.54□□□□□ -1.36
SKP1-205ENST00000519054 TAF1CQ15572 869 aaPredicted RBP6.54□□□□□ -1.36
SKP1-205ENST00000519054 PAOXQ6QHF9 649 aa6.54□□□□□ -1.36
SKP1-205ENST00000519054 CRELD1Q96HD1 420 aa6.54□□□□□ -1.36
SKP1-205ENST00000519054 MFSD14AQ96MC6 490 aa6.54□□□□□ -1.36
SKP1-205ENST00000519054 FANCD2OSQ96PS1 177 aa6.54□□□□□ -1.36
SKP1-205ENST00000519054 SEMA6CQ9H3T2 930 aa6.54□□□□□ -1.36
SKP1-205ENST00000519054 GSX1Q9H4S2 264 aaPredicted RBP6.54□□□□□ -1.36
SKP1-205ENST00000519054 LGR6Q9HBX8 967 aa6.54□□□□□ -1.36
SKP1-205ENST00000519054 CYP8B1Q9UNU6 501 aa6.54□□□□□ -1.36
SKP1-205ENST00000519054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.53□□□□□ -1.36
SKP1-205ENST00000519054 TRIM37O94972 964 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 FBXL6Q8N531 539 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 EZH1Q92800 747 aaPredicted RBP6.53□□□□□ -1.36
SKP1-205ENST00000519054 DBNDD2Q9BQY9 259 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 ATXN3LQ9H3M9 355 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 ACSS3Q9H6R3 686 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 PIDD1Q9HB75 910 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 DISC1Q9NRI5 854 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 CACNA2D2Q9NY47 1150 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 PCDHA4Q9UN74 947 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 DAGLAQ9Y4D2 1042 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 CSADQ9Y600 493 aa6.53□□□□□ -1.36
SKP1-205ENST00000519054 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
SKP1-205ENST00000519054 RNGTTO60942 597 aaKnown RBP6.52□□□□□ -1.37
SKP1-205ENST00000519054 HCLS1P14317 486 aaPredicted RBP6.52□□□□□ -1.37
SKP1-205ENST00000519054 ST13P50502 369 aaKnown RBP6.52□□□□□ -1.37
SKP1-205ENST00000519054 PTPN11Q06124 597 aaPredicted RBP6.52□□□□□ -1.37
SKP1-205ENST00000519054 TTLL4Q14679 1199 aa6.52□□□□□ -1.37
SKP1-205ENST00000519054 ZC3H12AQ5D1E8 599 aaKnown RBP6.52□□□□□ -1.37
SKP1-205ENST00000519054 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
SKP1-205ENST00000519054 USP31Q70CQ4 1352 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms