RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 UBE3CQ15386 1083 aa25.37■■□□□ 1.65
TOP1MT-206ENST00000518951 CDK5RAP2Q96SN8 1893 aa25.37■■□□□ 1.65
TOP1MT-206ENST00000518951 CLRN2A0PK11 232 aa25.36■■□□□ 1.65
TOP1MT-206ENST00000518951 DYNLL1P63167 89 aaKnown RBP25.36■■□□□ 1.65
TOP1MT-206ENST00000518951 ZSCAN25Q6NSZ9 544 aa25.36■■□□□ 1.65
TOP1MT-206ENST00000518951 CDC42EP5Q6NZY7 148 aa25.36■■□□□ 1.65
TOP1MT-206ENST00000518951 MIGA1Q8NAN2 632 aa25.36■■□□□ 1.65
TOP1MT-206ENST00000518951 AATFQ9NY61 560 aaKnown RBP eCLIP25.36■■□□□ 1.656e-6■■■■■ 54.7
TOP1MT-206ENST00000518951 PGAP2Q9UHJ9 254 aa25.36■■□□□ 1.65
TOP1MT-206ENST00000518951 ZNF70Q9UC06 446 aaPredicted RBP25.35■■□□□ 1.65
TOP1MT-206ENST00000518951 SCAF8Q9UPN6 1271 aaKnown RBP25.35■■□□□ 1.65
TOP1MT-206ENST00000518951 RHBDL3P58872 404 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 PPP4CP60510 307 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 SPDYE2Q495Y8 402 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 BMP2KLQ5H9B9 411 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 ANGEL2Q5VTE6 544 aaKnown RBP25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 TMED8Q6PL24 325 aaPredicted RBP25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 SEC62Q99442 399 aaKnown RBP25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 PUS7LQ9H0K6 701 aaKnown RBP25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 USP40Q9NVE5 1235 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 CLEC11AQ9Y240 323 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 ZFYP08048 801 aaPredicted RBP25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 CACNB3P54284 484 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 OSBP2Q969R2 916 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 RIOK1Q9BRS2 568 aaKnown RBP25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 GGA3Q9NZ52 723 aa25.34■■□□□ 1.65
TOP1MT-206ENST00000518951 ZMYM1Q5SVZ6 1142 aa25.33■■□□□ 1.65
TOP1MT-206ENST00000518951 SH3RF3Q8TEJ3 882 aaPredicted RBP25.33■■□□□ 1.65
TOP1MT-206ENST00000518951 ZC3H15Q8WU90 426 aaKnown RBP25.33■■□□□ 1.65
TOP1MT-206ENST00000518951 RFX7Q2KHR2 1363 aa25.32■■□□□ 1.64
TOP1MT-206ENST00000518951 LDHDQ86WU2 507 aa25.32■■□□□ 1.64
TOP1MT-206ENST00000518951 APPBP2Q92624 585 aa25.32■■□□□ 1.64
TOP1MT-206ENST00000518951 MAGEB6P1A0A0J9YX57 407 aa25.31■■□□□ 1.64
TOP1MT-206ENST00000518951 MYO1BO43795 1136 aa25.31■■□□□ 1.64
TOP1MT-206ENST00000518951 BAG3O95817 575 aa25.31■■□□□ 1.64
TOP1MT-206ENST00000518951 LRRFIP1Q32MZ4 808 aaKnown RBP25.31■■□□□ 1.64
TOP1MT-206ENST00000518951 FAM227BQ96M60 508 aa25.31■■□□□ 1.64
TOP1MT-206ENST00000518951 VEZTQ9HBM0 779 aa25.31■■□□□ 1.64
TOP1MT-206ENST00000518951 FOCADQ5VW36 1801 aa25.31■■□□□ 1.64
TOP1MT-206ENST00000518951 M0R2C6 588 aa25.3■■□□□ 1.64
TOP1MT-206ENST00000518951 NFIAQ12857 509 aa25.3■■□□□ 1.64
TOP1MT-206ENST00000518951 NMIQ13287 307 aaPredicted RBP25.3■■□□□ 1.64
TOP1MT-206ENST00000518951 MAP1SQ66K74 1059 aaPredicted RBP25.3■■□□□ 1.64
TOP1MT-206ENST00000518951 TICAM2Q86XR7 235 aa25.3■■□□□ 1.64
TOP1MT-206ENST00000518951 LCORLQ8N3X6 602 aa25.3■■□□□ 1.64
TOP1MT-206ENST00000518951 NOL10Q9BSC4 688 aaKnown RBP25.3■■□□□ 1.64
TOP1MT-206ENST00000518951 ARMT1Q9H993 441 aa25.3■■□□□ 1.64
TOP1MT-206ENST00000518951 A0A0D9SFI3 127 aa25.29■■□□□ 1.64
TOP1MT-206ENST00000518951 MBD4O95243 580 aa25.29■■□□□ 1.64
TOP1MT-206ENST00000518951 DLK2Q6UY11 383 aa25.29■■□□□ 1.64
TOP1MT-206ENST00000518951 PITPNM2Q9BZ72 1349 aa25.29■■□□□ 1.64
TOP1MT-206ENST00000518951 TCP10L2B9ZVM9 353 aa25.28■■□□□ 1.64
TOP1MT-206ENST00000518951 WDHD1O75717 1129 aaPredicted RBP25.28■■□□□ 1.64
TOP1MT-206ENST00000518951 DCPSQ96C86 337 aaKnown RBP25.28■■□□□ 1.64
TOP1MT-206ENST00000518951 TEX11Q8IYF3 940 aa25.28■■□□□ 1.64
TOP1MT-206ENST00000518951 DDX4Q9NQI0 724 aaKnown RBP25.28■■□□□ 1.64
TOP1MT-206ENST00000518951 FAM198AQ9UFP1 575 aa25.28■■□□□ 1.64
TOP1MT-206ENST00000518951 CNTNAP1P78357 1384 aa25.27■■□□□ 1.64
TOP1MT-206ENST00000518951 CHMLP26374 656 aa25.27■■□□□ 1.64
TOP1MT-206ENST00000518951 CHADLQ6NUI6 762 aa25.27■■□□□ 1.64
TOP1MT-206ENST00000518951 CCDC129Q6ZRS4 1044 aa25.27■■□□□ 1.64
TOP1MT-206ENST00000518951 IDI2Q9BXS1 227 aa25.27■■□□□ 1.64
TOP1MT-206ENST00000518951 GLIS2Q9BZE0 524 aaPredicted RBP25.27■■□□□ 1.64
TOP1MT-206ENST00000518951 ADM5C9JUS6 153 aa25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 PLCG2P16885 1265 aa25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 CWC27Q6UX04 472 aaKnown RBP25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 USP48Q86UV5 1035 aa25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 APOBEC3FQ8IUX4 373 aaKnown RBP25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 ZFPM1Q8IX07 1006 aa25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 AIDAQ96BJ3 306 aa25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 STRBPQ96SI9 672 aaKnown RBP25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 HELLSQ9NRZ9 838 aa25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 TMOD2Q9NZR1 351 aa25.26■■□□□ 1.63
TOP1MT-206ENST00000518951 GPAA1O43292 621 aa25.25■■□□□ 1.63
TOP1MT-206ENST00000518951 PRKAB2O43741 272 aa25.25■■□□□ 1.63
TOP1MT-206ENST00000518951 TOMM70O94826 608 aa25.25■■□□□ 1.63
TOP1MT-206ENST00000518951 FKBP1CQ5VVH2 108 aa25.25■■□□□ 1.63
TOP1MT-206ENST00000518951 KRT26Q7Z3Y9 468 aa25.25■■□□□ 1.63
TOP1MT-206ENST00000518951 TGFBRAP1Q8WUH2 860 aa25.25■■□□□ 1.63
TOP1MT-206ENST00000518951 IL25Q9H293 177 aa25.25■■□□□ 1.63
TOP1MT-206ENST00000518951 DIAPH3Q9NSV4 1193 aa25.25■■□□□ 1.63
TOP1MT-206ENST00000518951 HIP1O00291 1037 aa25.24■■□□□ 1.63
TOP1MT-206ENST00000518951 FMR1Q06787 632 aaKnown RBP eCLIP25.24■■□□□ 1.63
TOP1MT-206ENST00000518951 TCP10Q12799 353 aa25.24■■□□□ 1.63
TOP1MT-206ENST00000518951 PICALMQ13492 652 aa25.24■■□□□ 1.63
TOP1MT-206ENST00000518951 RASA3Q14644 834 aa25.24■■□□□ 1.63
TOP1MT-206ENST00000518951 DEFB129Q9H1M3 183 aa25.24■■□□□ 1.63
TOP1MT-206ENST00000518951 MCMDC2Q4G0Z9 681 aa25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 PRAMEF18Q5VWM3 479 aa25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 CDC37L1Q7L3B6 337 aa25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 ZNF589Q86UQ0 364 aaPredicted RBP25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 CERS3Q8IU89 383 aa25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 SULF1Q8IWU6 871 aa25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 CDAN1Q8IWY9 1227 aa25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 RBM46Q8TBY0 533 aaKnown RBP25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 SDR42E1Q8WUS8 393 aa25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 MYH1P12882 1939 aa25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 BAZ2AQ9UIF9 1905 aaKnown RBP25.23■■□□□ 1.63
TOP1MT-206ENST00000518951 ITGBL1O95965 494 aaPredicted RBP25.22■■□□□ 1.63
TOP1MT-206ENST00000518951 MAPKAPK5Q8IW41 473 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms