RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CFDP1Q9UEE9 299 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P23-201ENST00000518743 STRIP2Q9ULQ0 834 aa6.77□□□□□ -1.33
HMGB1P23-201ENST00000518743 TTF2Q9UNY4 1162 aaKnown RBP6.77□□□□□ -1.33
HMGB1P23-201ENST00000518743 DYRK1BQ9Y463 629 aa6.77□□□□□ -1.33
HMGB1P23-201ENST00000518743 PLCH1Q4KWH8 1693 aa6.77□□□□□ -1.33
HMGB1P23-201ENST00000518743 SOS2Q07890 1332 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 KIAA1107Q9UPP5 1409 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 TMEM131LA2VDJ0 1609 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 KIAA1210Q9ULL0 1709 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 TTLL8A6PVC2 850 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 F11P03951 625 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 TNNI2P48788 182 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 VEGFBP49765 207 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 LAMC2Q13753 1193 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 COL9A2Q14055 689 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 NFE2L2Q16236 605 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 PRPF40BQ6NWY9 871 aaKnown RBP6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 FAM196AQ6ZSG2 479 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 AAASQ9NRG9 546 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 DACH1Q9UI36 760 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 PCDHGB7Q9Y5F8 929 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 ADGRB3O60242 1522 aa6.76□□□□□ -1.33
HMGB1P23-201ENST00000518743 PLEKHG1Q9ULL1 1385 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 GRIN3BO60391 1043 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 ATF4P18848 351 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 IRS1P35568 1242 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 GRM2Q14416 872 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 MEI1Q5TIA1 1274 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 ZNF787Q6DD87 383 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 PI16Q6UXB8 463 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 KIAA0825Q8IV33 1275 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 CKAP2LQ8IYA6 745 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 C1orf127Q8N9H9 656 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 HPS1Q92902 700 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 SPON2Q9BUD6 331 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 CEP44Q9C0F1 390 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 CHRDQ9H2X0 955 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 KCNH4Q9UQ05 1017 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 ADGRL3Q9HAR2 1447 aa6.75□□□□□ -1.33
HMGB1P23-201ENST00000518743 NALCNQ8IZF0 1738 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 EREGO14944 169 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 CLSTN1O94985 981 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 FGRP09769 529 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 FAM157BP0CG42 384 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 PAK2Q13177 524 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 CCINQ13939 588 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 SV2BQ7L1I2 683 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 PNMA5Q96PV4 448 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 TRPM2O94759 1503 aa6.74□□□□□ -1.33
HMGB1P23-201ENST00000518743 NWD2Q9ULI1 1742 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 USP32Q8NFA0 1604 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 SOX18P35713 384 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 CCDC85BQ15834 202 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 CCDC144BQ3MJ40 725 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 C6orf118Q5T5N4 469 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 OR13H1Q8NG92 308 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 ORAI2Q96SN7 254 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 USP20Q9Y2K6 914 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 TBX22Q9Y458 520 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 NOS1P29475 1434 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 LRRIQ1Q96JM4 1722 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 C1orf167Q5SNV9 1468 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 FYCO1Q9BQS8 1478 aa6.73□□□□□ -1.33
HMGB1P23-201ENST00000518743 LAMC1P11047 1609 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 PTPN23Q9H3S7 1636 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 EHBP1L1Q8N3D4 1523 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 TLDC2A0PJX2 215 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 H7C1W4 665 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 AXIN1O15169 862 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 POLR3DP05423 398 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 PSAPP07602 524 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 IDI1Q13907 227 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 CTC1Q2NKJ3 1217 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 DTHD1Q6ZMT9 781 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 MCF2L2Q86YR7 1114 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 MTFR1LQ9H019 292 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 OSBPL2Q9H1P3 480 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 KBTBD4Q9NVX7 518 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 CNTN3Q9P232 1028 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 ABCC5O15440 1437 aa6.72□□□□□ -1.33
HMGB1P23-201ENST00000518743 A0A1W2PP55 124 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCDC85CA6NKD9 419 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 TOMM70O94826 608 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 AVPP01185 164 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 HYAL2Q12891 473 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 NFX1Q12986 1120 aaKnown RBP6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 PCSK7Q16549 785 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 GIMAP6Q6P9H5 292 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 ANKRD13AQ8IZ07 590 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 PMFBP1Q8TBY8 1022 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 SPACA7Q96KW9 195 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 TMEM74Q96NL1 305 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 OXCT2Q9BYC2 517 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 ZSWIM4Q9H7M6 989 aa6.71□□□□□ -1.34
HMGB1P23-201ENST00000518743 PCDHGC4Q9Y5F7 938 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms