RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 GOLGA6L10A6NI86 522 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 ERLIN2O94905 339 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 RDXP35241 583 aaKnown RBP12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 TCERG1LQ5VWI1 586 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 TAF4BQ92750 862 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 IMPACTQ9P2X3 320 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 MAP2P11137 1827 aaKnown RBP12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 TAF5LO75529 589 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 PROSER3Q2NL68 480 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 ZNF496Q96IT1 587 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 KIF20BQ96Q89 1820 aa12.35□□□□□ -0.43
PCDHGA1-202ENST00000517417 NEFHP12036 1026 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 ERCC6LQ2NKX8 1250 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 ZKSCAN3Q9BRR0 538 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 SRRTQ9BXP5 876 aaKnown RBP12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 GOLGA6L9A6NEM1 432 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 ZSCAN20P17040 1043 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 SCRN1Q12765 414 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 PICALMQ13492 652 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 ADAMTS13Q76LX8 1427 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 CCDC144BQ3MJ40 725 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 PLA2G4DQ86XP0 818 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 TMTC2Q8N394 836 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 PAF1Q8N7H5 531 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 TSG101Q99816 390 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 CNNM2Q9H8M5 875 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 NRXN3Q9Y4C0 1643 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 N4BP3O15049 544 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 FANCCQ00597 558 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 RESTQ13127 1097 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 TAX1BP1Q86VP1 789 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 CUL5Q93034 780 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 CALML4Q96GE6 196 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA1-202ENST00000517417 TPTE2Q6XPS3 522 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 CCDC148Q8NFR7 591 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 ATP5JP18859 108 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 TOB2Q14106 344 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 METTL22Q9BUU2 404 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 ARFGAP3Q9NP61 516 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 MCM9Q9NXL9 1143 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 EYA2O00167 538 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 AP5Z1O43299 807 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 PFKFB2O60825 505 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 GIGYF1O75420 1035 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 LMAN1P49257 510 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 TNIP1Q15025 636 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 HEATR3Q7Z4Q2 680 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 HLA-DOAP06340 250 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 BRAPQ7Z569 592 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 SMARCC1Q92922 1105 aaPredicted RBP12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 HELLSQ9NRZ9 838 aa12.33□□□□□ -0.44
PCDHGA1-202ENST00000517417 YEATS4O95619 227 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 EVCP57679 992 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 GCKRQ14397 625 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 DLC1Q96QB1 1528 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 SASH1O94885 1247 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 ZNF202O95125 648 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 CARD6Q9BX69 1037 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 MYL5Q02045 173 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 PLBD2Q8NHP8 589 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 ANKRD7Q92527 254 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 CABP5Q9NP86 173 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 PRDM4Q9UKN5 801 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 ADCY9O60503 1353 aa12.32□□□□□ -0.44
PCDHGA1-202ENST00000517417 NLRP12P59046 1061 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 ST5P78524 1137 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 KIAA1468Q9P260 1216 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 CYP21A2P08686 494 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 ITGA6P23229 1130 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 IQCEQ6IPM2 695 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 KANK3Q6NY19 840 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 PCDH11XQ9BZA7 1347 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 PCDH11YQ9BZA8 1340 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 CDC42BPGQ6DT37 1551 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 RRAGBQ5VZM2 374 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 ANO1Q5XXA6 986 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 TRIM47Q96LD4 638 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 DDX41Q9UJV9 622 aaKnown RBP12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 USP27XA6NNY8 438 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 E7EWF7 191 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 MBD4O95243 580 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 AMPD3Q01432 767 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 KARSQ15046 597 aaKnown RBP12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
PCDHGA1-202ENST00000517417 DHX58Q96C10 678 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms