RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 SEMA6CQ9H3T2 930 aa8.52□□□□□ -1.05
RUFY3-215ENST00000515479 GPN3Q9UHW5 284 aaPredicted RBP8.52□□□□□ -1.05
RUFY3-215ENST00000515479 FAM170BA6NMN3 283 aa8.51□□□□□ -1.05
RUFY3-215ENST00000515479 ACSS3Q9H6R3 686 aa8.51□□□□□ -1.05
RUFY3-215ENST00000515479 PPP4R2Q9NY27 417 aa8.51□□□□□ -1.05
RUFY3-215ENST00000515479 DAGLAQ9Y4D2 1042 aa8.51□□□□□ -1.05
RUFY3-215ENST00000515479 PNMA6FA0A0J9YX94 578 aa8.5□□□□□ -1.05
RUFY3-215ENST00000515479 CYP26A1O43174 497 aa8.5□□□□□ -1.05
RUFY3-215ENST00000515479 LIG1P18858 919 aa8.5□□□□□ -1.05
RUFY3-215ENST00000515479 BCO2Q9BYV7 579 aa8.5□□□□□ -1.05
RUFY3-215ENST00000515479 CCDC86Q9H6F5 360 aaKnown RBP8.5□□□□□ -1.05
RUFY3-215ENST00000515479 PPP1R9AQ9ULJ8 1098 aa8.5□□□□□ -1.05
RUFY3-215ENST00000515479 ANGEL1Q9UNK9 670 aaKnown RBP8.5□□□□□ -1.05
RUFY3-215ENST00000515479 PPP2R3AQ06190 1150 aa8.49□□□□□ -1.05
RUFY3-215ENST00000515479 MSMPQ1L6U9 139 aa8.49□□□□□ -1.05
RUFY3-215ENST00000515479 GATA6Q92908 595 aa8.49□□□□□ -1.05
RUFY3-215ENST00000515479 KRTAP9-2Q9BYQ4 174 aa8.49□□□□□ -1.05
RUFY3-215ENST00000515479 GSX1Q9H4S2 264 aaPredicted RBP8.49□□□□□ -1.05
RUFY3-215ENST00000515479 LGR6Q9HBX8 967 aa8.49□□□□□ -1.05
RUFY3-215ENST00000515479 COL17A1Q9UMD9 1497 aaPredicted RBP8.49□□□□□ -1.05
RUFY3-215ENST00000515479 TMPRSS2O15393 492 aa8.48□□□□□ -1.05
RUFY3-215ENST00000515479 TREHO43280 583 aa8.48□□□□□ -1.05
RUFY3-215ENST00000515479 GSTP1P09211 210 aaKnown RBP8.48□□□□□ -1.05
RUFY3-215ENST00000515479 HNRNPUQ00839 825 aaKnown RBP eCLIP8.48□□□□□ -1.05
RUFY3-215ENST00000515479 PLCB3Q01970 1234 aa8.48□□□□□ -1.05
RUFY3-215ENST00000515479 DSC3Q14574 896 aa8.48□□□□□ -1.05
RUFY3-215ENST00000515479 DUSP27Q5VZP5 1158 aa8.48□□□□□ -1.05
RUFY3-215ENST00000515479 WDR89Q96FK6 387 aaPredicted RBP8.48□□□□□ -1.05
RUFY3-215ENST00000515479 TMEM39AQ9NV64 488 aa8.48□□□□□ -1.05
RUFY3-215ENST00000515479 DYNC1LI2O43237 492 aaPredicted RBP8.47□□□□□ -1.05
RUFY3-215ENST00000515479 XRCC5P13010 732 aaKnown RBP8.47□□□□□ -1.05
RUFY3-215ENST00000515479 CYP27A1Q02318 531 aa8.47□□□□□ -1.05
RUFY3-215ENST00000515479 ENOX2Q16206 610 aaKnown RBP8.47□□□□□ -1.05
RUFY3-215ENST00000515479 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
RUFY3-215ENST00000515479 NXPE4Q6UWF7 544 aa8.47□□□□□ -1.05
RUFY3-215ENST00000515479 ZNF765Q7L2R6 523 aa8.47□□□□□ -1.05
RUFY3-215ENST00000515479 PIDD1Q9HB75 910 aa8.47□□□□□ -1.05
RUFY3-215ENST00000515479 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
RUFY3-215ENST00000515479 AKAP2Q9Y2D5 859 aa8.47□□□□□ -1.05
RUFY3-215ENST00000515479 SYNGAP1Q96PV0 1343 aa8.47□□□□□ -1.05
RUFY3-215ENST00000515479 ABCC9O60706 1549 aa8.46□□□□□ -1.05
RUFY3-215ENST00000515479 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.46□□□□□ -1.06
RUFY3-215ENST00000515479 ZNF862O60290 1169 aa8.46□□□□□ -1.06
RUFY3-215ENST00000515479 SLFN14P0C7P3 912 aa8.46□□□□□ -1.06
RUFY3-215ENST00000515479 ID3Q02535 119 aa8.46□□□□□ -1.06
RUFY3-215ENST00000515479 KCNB2Q92953 911 aa8.46□□□□□ -1.06
RUFY3-215ENST00000515479 ATXN3LQ9H3M9 355 aa8.46□□□□□ -1.06
RUFY3-215ENST00000515479 KRT82Q9NSB4 513 aa8.46□□□□□ -1.06
RUFY3-215ENST00000515479 SEZ6L2Q6UXD5 910 aa8.45□□□□□ -1.06
RUFY3-215ENST00000515479 VSIG10LQ86VR7 867 aa8.45□□□□□ -1.06
RUFY3-215ENST00000515479 CRIM1Q9NZV1 1036 aa8.45□□□□□ -1.06
RUFY3-215ENST00000515479 CCDC39Q9UFE4 941 aa8.45□□□□□ -1.06
RUFY3-215ENST00000515479 IVNS1ABPQ9Y6Y0 642 aa8.45□□□□□ -1.06
RUFY3-215ENST00000515479 KRTAP9-6A0A140TA67 174 aa8.44□□□□□ -1.06
RUFY3-215ENST00000515479 PAX4O43316 350 aa8.44□□□□□ -1.06
RUFY3-215ENST00000515479 TAL1P17542 331 aaPredicted RBP8.44□□□□□ -1.06
RUFY3-215ENST00000515479 MAPK8P45983 427 aa8.44□□□□□ -1.06
RUFY3-215ENST00000515479 KIF4BQ2VIQ3 1234 aa8.44□□□□□ -1.06
RUFY3-215ENST00000515479 SULF2Q8IWU5 870 aa8.44□□□□□ -1.06
RUFY3-215ENST00000515479 FANCD2OSQ96PS1 177 aa8.44□□□□□ -1.06
RUFY3-215ENST00000515479 C1GALT1Q9NS00 363 aa8.44□□□□□ -1.06
RUFY3-215ENST00000515479 BSDC1Q9NW68 430 aaPredicted RBP8.44□□□□□ -1.06
RUFY3-215ENST00000515479 PRNPP04156 253 aa8.43□□□□□ -1.06
RUFY3-215ENST00000515479 PDZD3Q86UT5 571 aa8.43□□□□□ -1.06
RUFY3-215ENST00000515479 ZSCAN29Q8IWY8 852 aaPredicted RBP8.43□□□□□ -1.06
RUFY3-215ENST00000515479 RNGTTO60942 597 aaKnown RBP8.42□□□□□ -1.06
RUFY3-215ENST00000515479 ABI1Q8IZP0 508 aa8.42□□□□□ -1.06
RUFY3-215ENST00000515479 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
RUFY3-215ENST00000515479 ZC3H7BQ9UGR2 993 aaKnown RBP8.42□□□□□ -1.06
RUFY3-215ENST00000515479 PCDHGC5Q9Y5F6 944 aa8.42□□□□□ -1.06
RUFY3-215ENST00000515479 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
RUFY3-215ENST00000515479 ARNTP27540 789 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 CDK5R2Q13319 367 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 TTLL4Q14679 1199 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 OGFOD3Q6PK18 319 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 TP53INP2Q8IXH6 220 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 SMYD4Q8IYR2 804 aaPredicted RBP8.41□□□□□ -1.06
RUFY3-215ENST00000515479 FBF1Q8TES7 1133 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 FBXL18Q96ME1 805 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 CBX8Q9HC52 389 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 DISC1Q9NRI5 854 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 ADGRE2Q9UHX3 823 aa8.41□□□□□ -1.06
RUFY3-215ENST00000515479 NME2P22392 152 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 GSTT1P30711 240 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 FMR1Q06787 632 aaKnown RBP eCLIP8.4□□□□□ -1.06
RUFY3-215ENST00000515479 KCNA1Q09470 495 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 CYP27C1Q4G0S4 372 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 MAP1SQ66K74 1059 aaPredicted RBP8.4□□□□□ -1.06
RUFY3-215ENST00000515479 TPTE2Q6XPS3 522 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 C3orf58Q8NDZ4 430 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 FLCNQ8NFG4 579 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 SETDB2Q96T68 719 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 EMILIN2Q9BXX0 1053 aa8.4□□□□□ -1.06
RUFY3-215ENST00000515479 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
RUFY3-215ENST00000515479 NFXL1Q6ZNB6 911 aa8.39□□□□□ -1.07
RUFY3-215ENST00000515479 ACSBG1Q96GR2 724 aa8.39□□□□□ -1.07
RUFY3-215ENST00000515479 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
RUFY3-215ENST00000515479 GPBAR1Q8TDU6 330 aa8.38□□□□□ -1.07
RUFY3-215ENST00000515479 ASB16Q96NS5 453 aa8.38□□□□□ -1.07
RUFY3-215ENST00000515479 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms