RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 IQCEQ6IPM2 695 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 ASIC4Q96FT7 647 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 NAP1L4Q99733 375 aaKnown RBP8.33□□□□□ -1.08
NIPBL-208ENST00000514335 BEGAINQ9BUH8 593 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 OSBPL5Q9H0X9 879 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-208ENST00000514335 VPS33BQ9H267 617 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 CCDC68Q9H2F9 335 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 ZNF304Q9HCX3 659 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 LZTS1Q9Y250 596 aa8.33□□□□□ -1.08
NIPBL-208ENST00000514335 ASXL1Q8IXJ9 1541 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 SCG2P13521 617 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 PECAM1P16284 738 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-208ENST00000514335 HDGFP51858 240 aaKnown RBP8.32□□□□□ -1.08
NIPBL-208ENST00000514335 BIRC3Q13489 604 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 MUM1L1Q5H9M0 696 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 PODNQ7Z5L7 613 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 ATP11CQ8NB49 1132 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 C1orf74Q96LT6 269 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 PRIMPOLQ96LW4 560 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 CNPY2Q9Y2B0 182 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 CHMP3Q9Y3E7 222 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 RREB1Q92766 1687 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 ZNF335Q9H4Z2 1342 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-208ENST00000514335 REC8O95072 547 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 HSD17B7P56937 341 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 BECN1Q14457 450 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 PAF1Q8N7H5 531 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 TCHPQ9BT92 498 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 C2orf49Q9BVC5 232 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-208ENST00000514335 MRGBPQ9NV56 204 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 TRAK1Q9UPV9 953 aa8.32□□□□□ -1.08
NIPBL-208ENST00000514335 hCG_1984214I3L0E3 225 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 RDXP35241 583 aaKnown RBP8.31□□□□□ -1.08
NIPBL-208ENST00000514335 HALP42357 657 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 POLR2FP61218 127 aaKnown RBP8.31□□□□□ -1.08
NIPBL-208ENST00000514335 ICA1Q05084 483 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 CCDC173Q0VFZ6 552 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-208ENST00000514335 KBTBD12Q3ZCT8 623 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 ESCO1Q5FWF5 840 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 TTLL5Q6EMB2 1281 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 JAZF1Q86VZ6 243 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 PEX5LQ8IYB4 626 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 TEX11Q8IYF3 940 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 OSBPL10Q9BXB5 764 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 CASS4Q9NQ75 786 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 ZNF219Q9P2Y4 722 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-208ENST00000514335 HDAC6Q9UBN7 1215 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 INTUQ9ULD6 942 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 RALGAPBQ86X10 1494 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 QSER1Q2KHR3 1735 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 INMTO95050 263 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 RAB27AP51159 221 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 BPIFB3P59826 476 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 DMPKQ09013 629 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 PAK2Q13177 524 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 UBE4AQ14139 1066 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 MYBPC3Q14896 1274 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 C10orf76Q5T2E6 689 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 TMCO5AQ8N6Q1 288 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 ZNF713Q8N859 430 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-208ENST00000514335 ARMC2Q8NEN0 867 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 PPP1R9BQ96SB3 815 aa8.31□□□□□ -1.08
NIPBL-208ENST00000514335 TTC12Q9H892 705 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-208ENST00000514335 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.31□□□□□ -1.08
NIPBL-208ENST00000514335 EVLQ9UI08 416 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-208ENST00000514335 CHL1O00533 1208 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 ABL1P00519 1130 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 CCDC159P0C7I6 412 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 OAS2P29728 719 aaKnown RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 RANBP1P43487 201 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 ITIH3Q06033 890 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 GNPTABQ3T906 1256 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 KANK4Q5T7N3 995 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 MEX3CQ5U5Q3 659 aaKnown RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 HDGFL2Q7Z4V5 671 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 DNAAF4Q8WXU2 420 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 RSRC1Q96IZ7 334 aaKnown RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 PPCSQ9HAB8 311 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 ASAP1Q9ULH1 1129 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 ABCC6O95255 1503 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 ATRNO75882 1429 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 RCN1Q15293 331 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 TAF11Q15544 211 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 EZH1Q92800 747 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 PCDH12Q9NPG4 1184 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 RASA4BC9J798 803 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 PRC1O43663 620 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 AKR1B10O60218 316 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 S100BP04271 92 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 MAN1A1P33908 653 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 HSPA1LP34931 641 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 RCAN1P53805 252 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 NBPF8Q3BBV2 869 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 SPECC1Q5M775 1068 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 CCDC30Q5VVM6 783 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 SRLQ86TD4 932 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 CCDC89Q8N998 374 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 WDR66Q8TBY9 1149 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms