RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 FLIIQ13045 1269 aa11.85□□□□□ -0.51
CDK7-210ENST00000513629 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDK7-210ENST00000513629 GBA2Q9HCG7 927 aaPredicted RBP11.85□□□□□ -0.51
CDK7-210ENST00000513629 MINPP1Q9UNW1 487 aa11.85□□□□□ -0.51
CDK7-210ENST00000513629 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
CDK7-210ENST00000513629 PSME4Q14997 1843 aa11.84□□□□□ -0.51
CDK7-210ENST00000513629 CA12O43570 354 aa11.84□□□□□ -0.51
CDK7-210ENST00000513629 ACTN4O43707 911 aaKnown RBP11.84□□□□□ -0.51
CDK7-210ENST00000513629 ZNF280AP59817 542 aaPredicted RBP11.84□□□□□ -0.51
CDK7-210ENST00000513629 NOGQ13253 232 aa11.84□□□□□ -0.51
CDK7-210ENST00000513629 FKBP5Q13451 457 aaPredicted RBP11.84□□□□□ -0.51
CDK7-210ENST00000513629 AGBL3Q8NEM8 1001 aa11.84□□□□□ -0.51
CDK7-210ENST00000513629 HLA-CQ95604 372 aa11.84□□□□□ -0.51
CDK7-210ENST00000513629 ABHD8Q96I13 439 aa11.84□□□□□ -0.51
CDK7-210ENST00000513629 ZIC5Q96T25 663 aa11.84□□□□□ -0.51
CDK7-210ENST00000513629 PRR14Q9BWN1 585 aa11.84□□□□□ -0.51
CDK7-210ENST00000513629 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
CDK7-210ENST00000513629 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 H7C1W4 665 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 ANP32CO43423 234 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 USP17L8P0C7I0 530 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 GJA5P36382 358 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 IGHMBP2P38935 993 aaKnown RBP11.83□□□□□ -0.52
CDK7-210ENST00000513629 CCT4P50991 539 aaKnown RBP11.83□□□□□ -0.52
CDK7-210ENST00000513629 SCARF1Q14162 830 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 GCKRQ14397 625 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 ANGEL2Q5VTE6 544 aaKnown RBP11.83□□□□□ -0.52
CDK7-210ENST00000513629 RGMBQ6NW40 437 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 PODNQ7Z5L7 613 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 C2orf69Q8N8R5 385 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 CDCA5Q96FF9 252 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 GMLQ99445 158 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 MYOZ2Q9NPC6 264 aa11.83□□□□□ -0.52
CDK7-210ENST00000513629 POLR2AP24928 1970 aaKnown RBP11.82□□□□□ -0.52
CDK7-210ENST00000513629 FAM155AB1AL88 458 aaPredicted RBP11.82□□□□□ -0.52
CDK7-210ENST00000513629 ITGA6P23229 1130 aa11.82□□□□□ -0.52
CDK7-210ENST00000513629 CASP7P55210 303 aa11.82□□□□□ -0.52
CDK7-210ENST00000513629 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
CDK7-210ENST00000513629 TUSC1Q2TAM9 212 aa11.82□□□□□ -0.52
CDK7-210ENST00000513629 MXD3Q9BW11 206 aa11.82□□□□□ -0.52
CDK7-210ENST00000513629 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
CDK7-210ENST00000513629 MYH16Q9H6N6 1097 aa11.82□□□□□ -0.52
CDK7-210ENST00000513629 KLRK1P26718 216 aa11.81□□□□□ -0.52
CDK7-210ENST00000513629 ZNF157P51786 506 aaPredicted RBP11.81□□□□□ -0.52
CDK7-210ENST00000513629 EXOSC9Q06265 439 aaKnown RBP11.81□□□□□ -0.52
CDK7-210ENST00000513629 DACT2Q5SW24 774 aa11.81□□□□□ -0.52
CDK7-210ENST00000513629 TXNRD3Q86VQ6 643 aa11.81□□□□□ -0.52
CDK7-210ENST00000513629 LINS1Q8NG48 757 aa11.81□□□□□ -0.52
CDK7-210ENST00000513629 SCAF8Q9UPN6 1271 aaKnown RBP11.81□□□□□ -0.52
CDK7-210ENST00000513629 VAMP4O75379 141 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 FDX1P10109 184 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 WDR63Q8IWG1 891 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 MPHOSPH8Q99549 860 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 COA1Q9GZY4 146 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 LEMD3Q9Y2U8 911 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 PCDHB15Q9Y5E8 787 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 ZNF646O15015 1829 aaPredicted RBP11.8□□□□□ -0.52
CDK7-210ENST00000513629 ZNF804BA4D1E1 1349 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 PITPNM2Q9BZ72 1349 aa11.8□□□□□ -0.52
CDK7-210ENST00000513629 PAPPA2Q9BXP8 1791 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 CCDC85CA6NKD9 419 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 F6X3S4 739 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 CSF1RP07333 972 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 KCNJ4P48050 445 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 KIF23Q02241 960 aaPredicted RBP11.79□□□□□ -0.52
CDK7-210ENST00000513629 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 NBPF9Q3BBW0 867 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 PUS10Q3MIT2 529 aaKnown RBP11.79□□□□□ -0.52
CDK7-210ENST00000513629 STRIP1Q5VSL9 837 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 PCDHGC3Q9UN70 934 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
CDK7-210ENST00000513629 CASP8AP2Q9UKL3 1982 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 ANKRD18BA2A2Z9 1011 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 SASH1O94885 1247 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 ZEB1P37275 1124 aaPredicted RBP11.78□□□□□ -0.52
CDK7-210ENST00000513629 PTPN5P54829 565 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 CHRNDQ07001 517 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 MORN1Q5T089 497 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 RASAL3Q86YV0 1011 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 OGFOD1Q8N543 542 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 MCOLN1Q9GZU1 580 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 CHMP3Q9Y3E7 222 aa11.78□□□□□ -0.52
CDK7-210ENST00000513629 SNAP23O00161 211 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 WNT10BO00744 389 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 FKBP1BP68106 108 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 QPCTQ16769 361 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 BEND3Q5T5X7 828 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 TTLL5Q6EMB2 1281 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 MOB2Q70IA6 237 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 KIAA0825Q8IV33 1275 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 SAGE1Q9NXZ1 904 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 CACNA1FO60840 1977 aa11.77□□□□□ -0.53
CDK7-210ENST00000513629 TAF5LO75529 589 aa11.76□□□□□ -0.53
CDK7-210ENST00000513629 GTF2IP78347 998 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms