RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 HHIPL1Q96JK4 782 aa15.54■□□□□ 0.08
DEPDC1B-206ENST00000512452 PIH1D3Q9NQM4 214 aaKnown RBP15.54■□□□□ 0.08
DEPDC1B-206ENST00000512452 MINPP1Q9UNW1 487 aa15.54■□□□□ 0.08
DEPDC1B-206ENST00000512452 ZDHHC9Q9Y397 364 aa15.54■□□□□ 0.08
DEPDC1B-206ENST00000512452 TRPM7Q96QT4 1865 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 WDR19Q8NEZ3 1342 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 TCRBV5S4A2TA0A5A2 114 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 TRAF5O00463 557 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 GPAA1O43292 621 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 CHGBP05060 677 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 RASGRF1Q13972 1273 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 TOB2Q14106 344 aaPredicted RBP15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 PI16Q6UXB8 463 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 ZIC5Q96T25 663 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 AGXT2Q9BYV1 514 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 SAGE1Q9NXZ1 904 aa15.53■□□□□ 0.08
DEPDC1B-206ENST00000512452 IDH1O75874 414 aaKnown RBP15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 EXOSC10Q01780 885 aaKnown RBP15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 NOGQ13253 232 aa15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 NFIXQ14938 502 aa15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 ME3Q16798 604 aa15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 ZNF622Q969S3 477 aaKnown RBP eCLIP15.52■□□□□ 0.086e-8■■■□□ 16.1
DEPDC1B-206ENST00000512452 PUS7LQ9H0K6 701 aaKnown RBP15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 TPCN1Q9ULQ1 816 aa15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 TAF6LQ9Y6J9 622 aa15.52■□□□□ 0.08
DEPDC1B-206ENST00000512452 ZNF541Q9H0D2 1346 aa15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 ZNF532Q9HCE3 1301 aa15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 E7EWF7 191 aa15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 GNAT2P19087 354 aa15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 PDCP20941 246 aa15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 PKP1Q13835 747 aa15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 PKN2Q16513 984 aaKnown RBP15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 CNBD1Q8NA66 436 aa15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 DENND2AQ9ULE3 1009 aa15.51■□□□□ 0.07
DEPDC1B-206ENST00000512452 FOXP2O15409 715 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 LARGE1O95461 756 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 FGAP02671 866 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 BCAMP50895 628 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 SLFNL1Q499Z3 407 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 STOX1Q6ZVD7 989 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 FBXO33Q7Z6M2 555 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 CCDC83Q8IWF9 413 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 CELF1Q92879 486 aaKnown RBP15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 LLPHQ9BRT6 129 aaKnown RBP15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 ISY1Q9ULR0 285 aaKnown RBP15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 ATP6V1DQ9Y5K8 247 aa15.5■□□□□ 0.07
DEPDC1B-206ENST00000512452 COL4A1P02462 1669 aa15.49■□□□□ 0.07
DEPDC1B-206ENST00000512452 STX6O43752 255 aa15.49■□□□□ 0.07
DEPDC1B-206ENST00000512452 KLHL40Q2TBA0 621 aa15.49■□□□□ 0.07
DEPDC1B-206ENST00000512452 Q6ZUG5 572 aa15.49■□□□□ 0.07
DEPDC1B-206ENST00000512452 STRBPQ96SI9 672 aaKnown RBP15.49■□□□□ 0.07
DEPDC1B-206ENST00000512452 ZNF213O14771 459 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 NPHP1O15259 732 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 TRPA1O75762 1119 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 CELF2O95319 508 aaKnown RBP15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 ZSCAN22P10073 491 aaPredicted RBP15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 GJB2P29033 226 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 EVCP57679 992 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 ST5P78524 1137 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 ST3GAL1Q11201 340 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 GRAPQ13588 217 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 GRAPLQ8TC17 118 aaPredicted RBP15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 GTF3C6Q969F1 213 aa15.48■□□□□ 0.07
DEPDC1B-206ENST00000512452 LAMA4Q16363 1823 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 PATL2C9JE40 543 aaKnown RBP15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 PFKFB2O60825 505 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 SERPINB2P05120 415 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 SYT1P21579 422 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 FGD1P98174 961 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 CRY2Q49AN0 593 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 MCTP1Q6DN14 999 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 C15orf52Q6ZUT6 534 aaKnown RBP15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 VPS37DQ86XT2 251 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 MPNDQ8N594 471 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 MAGEB6Q8N7X4 407 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 NCOA7Q8NI08 942 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 ZNF274Q96GC6 653 aaPredicted RBP15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 LMBRD1Q9NUN5 540 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 RNF186Q9NXI6 227 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 LEMD3Q9Y2U8 911 aa15.47■□□□□ 0.07
DEPDC1B-206ENST00000512452 SNAP23O00161 211 aa15.46■□□□□ 0.07
DEPDC1B-206ENST00000512452 MCM5P33992 734 aa15.46■□□□□ 0.07
DEPDC1B-206ENST00000512452 PRR5LQ6MZQ0 368 aa15.46■□□□□ 0.07
DEPDC1B-206ENST00000512452 TMC4Q7Z404 712 aa15.46■□□□□ 0.07
DEPDC1B-206ENST00000512452 FAM84BQ96KN1 310 aaPredicted RBP15.46■□□□□ 0.07
DEPDC1B-206ENST00000512452 LRP2BPQ9P2M1 347 aa15.46■□□□□ 0.07
DEPDC1B-206ENST00000512452 KIF3AQ9Y496 699 aa15.46■□□□□ 0.07
DEPDC1B-206ENST00000512452 MBD3O95983 291 aa15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 HMGN5P82970 282 aaKnown RBP15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 TRDNQ13061 729 aa15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 TTLL5Q6EMB2 1281 aa15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 RALYLQ86SE5 291 aaKnown RBP15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 MB21D2Q8IYB1 491 aaPredicted RBP15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 NECAB1Q8N987 351 aa15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 TMEM87AQ8NBN3 555 aa15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 BRF1Q92994 677 aa15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 NACAP1Q9BZK3 213 aa15.45■□□□□ 0.06
DEPDC1B-206ENST00000512452 A0A0C4DFX4 3053 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms