RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 JMYQ8N9B5 988 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 UBE2Q2Q8WVN8 375 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 MPHOSPH8Q99549 860 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 ALG1Q9BT22 464 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 LY9Q9HBG7 655 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 CCDC87Q9NVE4 849 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 NRBP1Q9UHY1 535 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
CPNE4-210ENST00000512332 DOCK2Q92608 1830 aa10.73□□□□□ -0.69
CPNE4-210ENST00000512332 NEDD4P46934 1319 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 PNPLA7Q6ZV29 1317 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 SLIT2O94813 1529 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 A0A1B0GVL5 298 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 B4E1Z4 1266 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 RCAN1P53805 252 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 RASGRF1Q13972 1273 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 PIAS4Q8N2W9 510 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-210ENST00000512332 SYTL4Q96C24 671 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-210ENST00000512332 KRT23Q9C075 422 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.72□□□□□ -0.69
CPNE4-210ENST00000512332 FAM13BQ9NYF5 915 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 CICQ96RK0 1608 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-210ENST00000512332 WNK3Q9BYP7 1800 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 ZNF202O95125 648 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 CCDC152Q4G0S7 254 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 AKNAD1Q5T1N1 836 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 KRT40Q6A162 431 aa10.72□□□□□ -0.69
CPNE4-210ENST00000512332 CACTINQ8WUQ7 758 aaKnown RBP10.72□□□□□ -0.69
CPNE4-210ENST00000512332 FAM217BQ9NTX9 383 aaPredicted RBP10.72□□□□□ -0.69
CPNE4-210ENST00000512332 RREB1Q92766 1687 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 MYO5AQ9Y4I1 1855 aaKnown RBP10.71□□□□□ -0.69
CPNE4-210ENST00000512332 GSG1L2A8MUP6 293 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 CDC27P30260 824 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 IARSP41252 1262 aaKnown RBP10.71□□□□□ -0.69
CPNE4-210ENST00000512332 RBM10P98175 930 aaKnown RBP10.71□□□□□ -0.69
CPNE4-210ENST00000512332 DHX8Q14562 1220 aaKnown RBP10.71□□□□□ -0.69
CPNE4-210ENST00000512332 VPS37DQ86XT2 251 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 LRRC8AQ8IWT6 810 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 TMTC2Q8N394 836 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 MAGEB6Q8N7X4 407 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 WASF1Q92558 559 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 NACAP1Q9BZK3 213 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 NAPBQ9H115 298 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 EPB41L4AQ9HCS5 686 aaPredicted RBP10.71□□□□□ -0.69
CPNE4-210ENST00000512332 KCND1Q9NSA2 647 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 ZSWIM5Q9P217 1185 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 DENND2AQ9ULE3 1009 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 HPSEQ9Y251 543 aa10.71□□□□□ -0.69
CPNE4-210ENST00000512332 TIAM2Q8IVF5 1701 aa10.71□□□□□ -0.7
CPNE4-210ENST00000512332 COL16A1Q07092 1604 aaPredicted RBP10.71□□□□□ -0.7
CPNE4-210ENST00000512332 AHDC1Q5TGY3 1603 aaPredicted RBP10.71□□□□□ -0.7
CPNE4-210ENST00000512332 KDM4FA0A1W2PPD8 638 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 CAMTA2O94983 1202 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 MBD4O95243 580 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 SLC3A2P08195 630 aaKnown RBP10.7□□□□□ -0.7
CPNE4-210ENST00000512332 IFNAR1P17181 557 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 NLRP12P59046 1061 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 LRMPQ12912 555 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 PTPAQ15257 358 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 ZRSR1Q15695 479 aaKnown RBP10.7□□□□□ -0.7
CPNE4-210ENST00000512332 CCDC144BQ3MJ40 725 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 TMEM67Q5HYA8 995 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 CCDC144CPQ8IYA2 1237 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 ELOA2Q8IYF1 753 aaPredicted RBP10.7□□□□□ -0.7
CPNE4-210ENST00000512332 HELBQ8NG08 1087 aaPredicted RBP10.7□□□□□ -0.7
CPNE4-210ENST00000512332 NKX2-3Q8TAU0 364 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 STAG1Q8WVM7 1258 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 GJB4Q9NTQ9 266 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 IMPACTQ9P2X3 320 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 SLC12A7Q9Y666 1083 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 PFKFB1P16118 471 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 IGHMBP2P38935 993 aaKnown RBP10.7□□□□□ -0.7
CPNE4-210ENST00000512332 CRKLP46109 303 aaKnown RBP10.7□□□□□ -0.7
CPNE4-210ENST00000512332 GSDMDP57764 484 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 TRIM29Q14134 588 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 MFSD6Q6ZSS7 791 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 MAP3K14Q99558 947 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 OSBPL5Q9H0X9 879 aaPredicted RBP10.7□□□□□ -0.7
CPNE4-210ENST00000512332 TUBE1Q9UJT0 475 aa10.7□□□□□ -0.7
CPNE4-210ENST00000512332 GOLGA8AA7E2F4 631 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 RGL2O15211 777 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 WDHD1O75717 1129 aaPredicted RBP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 NTSR2O95665 410 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 SART3Q15020 963 aaKnown RBP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 NFXL1Q6ZNB6 911 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 MICU3Q86XE3 530 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 RAB11FIP4Q86YS3 637 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 AOPEPQ8N6M6 819 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 RNF41Q9H4P4 317 aaPredicted RBP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 SENP2Q9HC62 589 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 DOT1LQ8TEK3 1739 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 KAT6BQ8WYB5 2073 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 LOC102724428A0A0B4J2F2 783 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 CCDC196A0A1B0GTZ2 297 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 CCDC69A6NI79 296 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 IFIT3O14879 490 aaKnown RBP10.69□□□□□ -0.7
CPNE4-210ENST00000512332 IKBKBO14920 756 aa10.69□□□□□ -0.7
CPNE4-210ENST00000512332 CTIFO43310 598 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms