RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 LARP6Q9BRS8 491 aaKnown RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 MBIPQ9NS73 344 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 ERCC6L2Q5T890 1561 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 ZBED4O75132 1171 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 NAP1L4Q99733 375 aaKnown RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 ABCC3O15438 1527 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 PTPDC1A2A3K4 754 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 SPDYE16A6NNV3 312 aaPredicted RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 NEMFO60524 1076 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 MYCLP12524 364 aaPredicted RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 PPP2R5CQ13362 524 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 ZYXQ15942 572 aaKnown RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 SPDYE2Q495Y8 402 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 JAKMIP2Q96AA8 810 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 LRRC59Q96AG4 307 aaKnown RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 CCDC87Q9NVE4 849 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 FRMD4BQ9Y2L6 1034 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 CD2APQ9Y5K6 639 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 CSADQ9Y600 493 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 ESYT2A0FGR8 921 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 IL2RBP14784 551 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 GNAT2P19087 354 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 KRT9P35527 623 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 FCHSD1Q86WN1 690 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 SUPT20HQ8NEM7 779 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 FAM193BQ96PV7 902 aaPredicted RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 TTC36A6NLP5 189 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 WDR46O15213 610 aaKnown RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 POLR3GO15318 223 aaPredicted RBP6.5□□□□□ -1.37
USP38-203ENST00000511739 GJB2P29033 226 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 PPP2R5DQ14738 602 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 CHST3Q7LGC8 479 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 NIM1KQ8IY84 436 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 RNF169Q8NCN4 708 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 KIFAP3Q92845 792 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 EPSTI1Q96J88 318 aa6.5□□□□□ -1.37
USP38-203ENST00000511739 PIK3R4Q99570 1358 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 STK25O00506 426 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 TACC1O75410 805 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 UFL1O94874 794 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 RPL13P26373 211 aaKnown RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 VPS52Q8N1B4 723 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 XAGE3Q8WTP9 111 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 JAG2Q9Y219 1238 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 NUCB1Q02818 461 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 PPP1R7Q15435 360 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 OTUD7BQ6GQQ9 843 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 TEX11Q8IYF3 940 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 CCNL1Q9UK58 526 aaPredicted RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 RTL9Q8NET4 1388 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 ABL1P00519 1130 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 PTGS1P23219 599 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 IRX5P78411 483 aaPredicted RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 PLCB4Q15147 1175 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 NEK11Q8NG66 645 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 LEO1Q8WVC0 666 aaPredicted RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 BCS1LQ9Y276 419 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 CLTCL1P53675 1640 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 ATP7BP35670 1465 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 PARP1P09874 1014 aaKnown RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 UTP14CQ5TAP6 766 aaKnown RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 COPS6Q7L5N1 327 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 FMNL3Q8IVF7 1028 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 MRPL50Q8N5N7 158 aaKnown RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 ZSWIM4Q9H7M6 989 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 SETBP1Q9Y6X0 1596 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 CHMP2AO43633 222 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 ANXA1P04083 346 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 OATP04181 439 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 IL15P40933 162 aaPredicted RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 GNG11P61952 73 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 CLUL1Q15846 466 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 UAP1Q16222 522 aaPredicted RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 MUM1L1Q5H9M0 696 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 DCAF17Q5H9S7 520 aaPredicted RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 NOP9Q86U38 636 aaKnown RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 AFAP1L2Q8N4X5 818 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 CSRNP2Q9H175 543 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 CLSTN2Q9H4D0 955 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 STIM2Q9P246 746 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 ANKFY1Q9P2R3 1169 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 MTUS1Q9ULD2 1270 aa6.49□□□□□ -1.37
USP38-203ENST00000511739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP38-203ENST00000511739 RNF17Q9BXT8 1623 aaKnown RBP6.49□□□□□ -1.37
USP38-203ENST00000511739 BICDL2A1A5D9 508 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 PLEKHG3A1L390 1219 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 TRIM75PA6NK02 468 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 IGHDP01880 384 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 HSPA4P34932 840 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 LMBR1LQ6UX01 489 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 CCDC25Q86WR0 208 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 MIGA1Q8NAN2 632 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP38-203ENST00000511739 TTLL3Q9Y4R7 772 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 TMEM2Q9UHN6 1383 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 IRS4O14654 1257 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 ERCC5P28715 1186 aaPredicted RBP6.48□□□□□ -1.37
USP38-203ENST00000511739 MSL1Q68DK7 614 aa6.48□□□□□ -1.37
USP38-203ENST00000511739 USP48Q86UV5 1035 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms