RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 DNAAF2Q9NVR5 837 aaKnown RBP8.81□□□□□ -1
COPS4-209ENST00000511653 NOD1Q9Y239 953 aa8.81□□□□□ -1
COPS4-209ENST00000511653 UBN2Q6ZU65 1347 aa8.8□□□□□ -1
COPS4-209ENST00000511653 THSD7BQ9C0I4 1608 aa8.8□□□□□ -1
COPS4-209ENST00000511653 LZTS3O60299 673 aaPredicted RBP8.8□□□□□ -1
COPS4-209ENST00000511653 FSHRP23945 695 aa8.8□□□□□ -1
COPS4-209ENST00000511653 IARSP41252 1262 aaKnown RBP8.8□□□□□ -1
COPS4-209ENST00000511653 SLC19A1P41440 591 aa8.8□□□□□ -1
COPS4-209ENST00000511653 RIC1Q4ADV7 1423 aa8.8□□□□□ -1
COPS4-209ENST00000511653 TTLL7Q6ZT98 887 aa8.8□□□□□ -1
COPS4-209ENST00000511653 SYNE4Q8N205 404 aa8.8□□□□□ -1
COPS4-209ENST00000511653 NGEFQ8N5V2 710 aa8.8□□□□□ -1
COPS4-209ENST00000511653 MRGPRX2Q96LB1 330 aa8.8□□□□□ -1
COPS4-209ENST00000511653 CDK15Q96Q40 435 aa8.8□□□□□ -1
COPS4-209ENST00000511653 THUMPD2Q9BTF0 503 aaKnown RBP8.8□□□□□ -1
COPS4-209ENST00000511653 MAP4K5Q9Y4K4 846 aa8.8□□□□□ -1
COPS4-209ENST00000511653 FZD9O00144 591 aa8.79□□□□□ -1
COPS4-209ENST00000511653 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
COPS4-209ENST00000511653 CD2BP2O95400 341 aaKnown RBP8.79□□□□□ -1
COPS4-209ENST00000511653 GPTP24298 496 aa8.79□□□□□ -1
COPS4-209ENST00000511653 EPHX2P34913 555 aa8.79□□□□□ -1
COPS4-209ENST00000511653 VEGFBP49765 207 aa8.79□□□□□ -1
COPS4-209ENST00000511653 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
COPS4-209ENST00000511653 CRY2Q49AN0 593 aa8.79□□□□□ -1
COPS4-209ENST00000511653 KCTD17Q8N5Z5 321 aa8.79□□□□□ -1
COPS4-209ENST00000511653 HACL1Q9UJ83 578 aa8.79□□□□□ -1
COPS4-209ENST00000511653 PDE4DIPQ5VU43 2346 aa8.79□□□□□ -1
COPS4-209ENST00000511653 SFI1A8K8P3 1242 aa8.78□□□□□ -1
COPS4-209ENST00000511653 HTATSF1O43719 755 aaKnown RBP8.78□□□□□ -1
COPS4-209ENST00000511653 NR3C2P08235 984 aa8.78□□□□□ -1
COPS4-209ENST00000511653 RNF20Q5VTR2 975 aa8.78□□□□□ -1
COPS4-209ENST00000511653 MAP1SQ66K74 1059 aaPredicted RBP8.78□□□□□ -1
COPS4-209ENST00000511653 RTKN2Q8IZC4 609 aa8.78□□□□□ -1
COPS4-209ENST00000511653 MAP3K15Q6ZN16 1313 aa8.78□□□□□ -1
COPS4-209ENST00000511653 MYL6BP14649 208 aa8.78□□□□□ -1
COPS4-209ENST00000511653 GTF2E1P29083 439 aaPredicted RBP8.78□□□□□ -1
COPS4-209ENST00000511653 EIF4A1P60842 406 aaKnown RBP8.78□□□□□ -1
COPS4-209ENST00000511653 FMR1Q06787 632 aaKnown RBP eCLIP8.78□□□□□ -1
COPS4-209ENST00000511653 SPRYD7Q5W111 196 aa8.78□□□□□ -1
COPS4-209ENST00000511653 FAM200AQ8TCP9 573 aa8.78□□□□□ -1
COPS4-209ENST00000511653 PSMD1Q99460 953 aa8.78□□□□□ -1
COPS4-209ENST00000511653 RRP7AQ9Y3A4 280 aaKnown RBP8.78□□□□□ -1
COPS4-209ENST00000511653 IBTKQ9P2D0 1353 aaPredicted RBP8.77□□□□□ -1
COPS4-209ENST00000511653 NTSR2O95665 410 aa8.77□□□□□ -1.01
COPS4-209ENST00000511653 BRD1O95696 1058 aa8.77□□□□□ -1.01
COPS4-209ENST00000511653 ALDH1B1P30837 517 aa8.77□□□□□ -1.01
COPS4-209ENST00000511653 SUSD4Q5VX71 490 aa8.77□□□□□ -1.01
COPS4-209ENST00000511653 GPC2Q8N158 579 aa8.77□□□□□ -1.01
COPS4-209ENST00000511653 PLEKHF1Q96S99 279 aa8.77□□□□□ -1.01
COPS4-209ENST00000511653 CDV3Q9UKY7 258 aaKnown RBP8.77□□□□□ -1.01
COPS4-209ENST00000511653 GJA3Q9Y6H8 435 aa8.77□□□□□ -1.01
COPS4-209ENST00000511653 DDX60Q8IY21 1712 aaKnown RBP8.77□□□□□ -1.01
COPS4-209ENST00000511653 RASSF10A6NK89 507 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 ERVV-1B6SEH8 477 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 TCERG1O14776 1098 aaKnown RBP8.76□□□□□ -1.01
COPS4-209ENST00000511653 HOXA10P31260 410 aaPredicted RBP8.76□□□□□ -1.01
COPS4-209ENST00000511653 SCNN1DP51172 638 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 CCDC102BQ68D86 513 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 CNTROBQ8N137 903 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 SIX5Q8N196 739 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 TPCN2Q8NHX9 752 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 NYXQ9GZU5 481 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 GZF1Q9H116 711 aaPredicted RBP8.76□□□□□ -1.01
COPS4-209ENST00000511653 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 POLR2AP24928 1970 aaKnown RBP8.76□□□□□ -1.01
COPS4-209ENST00000511653 DUOX1Q9NRD9 1551 aa8.76□□□□□ -1.01
COPS4-209ENST00000511653 LRRC37AA6NMS7 1700 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 WNT7AO00755 349 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 EPS15P42566 896 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 NFE2L2Q16236 605 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 KIF6Q6ZMV9 814 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 LRP10Q7Z4F1 713 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 PNMA8AQ86V59 439 aaPredicted RBP8.75□□□□□ -1.01
COPS4-209ENST00000511653 ZNF34Q8IZ26 560 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 LARGE2Q8N3Y3 721 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 JDP2Q8WYK2 163 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 RPGRQ92834 1020 aaKnown RBP8.75□□□□□ -1.01
COPS4-209ENST00000511653 OSBPL3Q9H4L5 887 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 PLA2G2EQ9NZK7 142 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 PKD2L1Q9P0L9 805 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 CASP8AP2Q9UKL3 1982 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 COL4A1P02462 1669 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 LILRA1O75019 489 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 ANXA1P04083 346 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 CTCFP49711 727 aaPredicted RBP8.75□□□□□ -1.01
COPS4-209ENST00000511653 LBX1P52954 281 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 ERVK-9P63128 1117 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 USP4Q13107 963 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 PROSER3Q2NL68 480 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 TRIM50Q86XT4 487 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 AIDAQ96BJ3 306 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 PRDM10Q9NQV6 1147 aa8.75□□□□□ -1.01
COPS4-209ENST00000511653 DDX21Q9NR30 783 aaKnown RBP eCLIP8.75□□□□□ -1.01
COPS4-209ENST00000511653 TRAF5O00463 557 aa8.74□□□□□ -1.01
COPS4-209ENST00000511653 HSPA8P11142 646 aaKnown RBP8.74□□□□□ -1.01
COPS4-209ENST00000511653 ADD1P35611 737 aaKnown RBP8.74□□□□□ -1.01
COPS4-209ENST00000511653 ATP1A2P50993 1020 aa8.74□□□□□ -1.01
COPS4-209ENST00000511653 EIF6P56537 245 aaKnown RBP8.74□□□□□ -1.01
COPS4-209ENST00000511653 CC2D2BQ6DHV5 1058 aa8.74□□□□□ -1.01
COPS4-209ENST00000511653 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms