RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 FOXP2O15409 715 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 STX10O60499 249 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 FGAP02671 866 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 POLR3DP05423 398 aaPredicted RBP10.47□□□□□ -0.73
SNF8-210ENST00000511214 PNMA6AP0CW24 399 aaPredicted RBP10.47□□□□□ -0.73
SNF8-210ENST00000511214 CLCN6P51797 869 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 TBX2Q13207 712 aaPredicted RBP10.47□□□□□ -0.73
SNF8-210ENST00000511214 TUBB2AQ13885 445 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 TTF1Q15361 905 aaPredicted RBP10.47□□□□□ -0.73
SNF8-210ENST00000511214 ERCC6LQ2NKX8 1250 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 ARHGAP29Q52LW3 1261 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 CCDC102BQ68D86 513 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 TTLL5Q6EMB2 1281 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 POTEHQ6S545 545 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 REXO1L1PQ8IX06 675 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 GPR161Q8N6U8 529 aaKnown RBP10.47□□□□□ -0.73
SNF8-210ENST00000511214 WASF1Q92558 559 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 ALG1Q9BT22 464 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 TUBB2BQ9BVA1 445 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 UBXN6Q9BZV1 441 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 C19orf44Q9H6X5 657 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 ANGEL1Q9UNK9 670 aaKnown RBP10.47□□□□□ -0.73
SNF8-210ENST00000511214 V9GYY5 206 aaPredicted RBP10.47□□□□□ -0.73
SNF8-210ENST00000511214 PAPPAQ13219 1627 aa10.47□□□□□ -0.73
SNF8-210ENST00000511214 NBPF26B4DH59 902 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 ERVV-2B6SEH9 535 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 KIF28PB7ZC32 967 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 SH2B2O14492 632 aaPredicted RBP10.46□□□□□ -0.73
SNF8-210ENST00000511214 CYP27B1O15528 508 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 WDHD1O75717 1129 aaPredicted RBP10.46□□□□□ -0.73
SNF8-210ENST00000511214 SERPINC1P01008 464 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 LMOD1P29536 600 aaPredicted RBP10.46□□□□□ -0.73
SNF8-210ENST00000511214 CYP2C19P33261 490 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 METAP2P50579 478 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNF8-210ENST00000511214 ALX1Q15699 326 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 LRRC24Q50LG9 513 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 NT5DC1Q5TFE4 455 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 KRT40Q6A162 431 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 KANK3Q6NY19 840 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 NBPF10Q6P3W6 841 aaKnown RBP10.46□□□□□ -0.73
SNF8-210ENST00000511214 KRBA2Q6ZNG9 492 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 MSL3Q8N5Y2 521 aaKnown RBP10.46□□□□□ -0.73
SNF8-210ENST00000511214 NBPF15Q8N660 670 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 MLKLQ8NB16 471 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 ENOX1Q8TC92 643 aaKnown RBP10.46□□□□□ -0.73
SNF8-210ENST00000511214 MAP3K14Q99558 947 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 MTA3Q9BTC8 594 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 ISCA1Q9BUE6 129 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.46□□□□□ -0.73
SNF8-210ENST00000511214 MROH7-TTC4A0A0A0MT08 1334 aa10.46□□□□□ -0.73
SNF8-210ENST00000511214 DCCP43146 1447 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 A0A087WWV3 80 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 A0A0G2JLW4 131 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 LIFRP42702 1097 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 RCAN1P53805 252 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 TRIM29Q14134 588 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 UBE3CQ15386 1083 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 WASHC4Q2M389 1173 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 CCDC57Q2TAC2 916 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 CFAP100Q494V2 611 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 GORABQ5T7V8 394 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 OTUD7BQ6GQQ9 843 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 SHC4Q6S5L8 630 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 CHST3Q7LGC8 479 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 SGMS1Q86VZ5 419 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 VPS37DQ86XT2 251 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 TMEM139Q8IV31 216 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
SNF8-210ENST00000511214 ERCC4Q92889 916 aaPredicted RBP10.45□□□□□ -0.74
SNF8-210ENST00000511214 XAGE2Q96GT9 111 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 CCDC34Q96HJ3 373 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 TSPYL1Q9H0U9 437 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 PPP2R2CQ9Y2T4 447 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 PARP3Q9Y6F1 533 aa10.45□□□□□ -0.74
SNF8-210ENST00000511214 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 TNS2Q63HR2 1409 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 WDR17Q8IZU2 1322 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 VWA3AA6NCI4 1184 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 BIN1O00499 593 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 GPAA1O43292 621 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 PCCAP05165 728 aaPredicted RBP10.44□□□□□ -0.74
SNF8-210ENST00000511214 CSF1RP07333 972 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 ATP1A3P13637 1013 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 CASQ1P31415 396 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 ADD2P35612 726 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 PLA2G4AP47712 749 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 FKBP4Q02790 459 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNF8-210ENST00000511214 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
SNF8-210ENST00000511214 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 RSRC2Q7L4I2 434 aaKnown RBP10.44□□□□□ -0.74
SNF8-210ENST00000511214 TXLNBQ8N3L3 684 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 KRI1Q8N9T8 703 aaKnown RBP10.44□□□□□ -0.74
SNF8-210ENST00000511214 CNNM3Q8NE01 707 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 RABGGTAQ92696 567 aa10.44□□□□□ -0.74
SNF8-210ENST00000511214 BAG1Q99933 345 aaPredicted RBP10.44□□□□□ -0.74
SNF8-210ENST00000511214 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNF8-210ENST00000511214 NAA15Q9BXJ9 866 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms