RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 BAZ2AQ9UIF9 1905 aaKnown RBP12.62□□□□□ -0.39
NR1I3-227ENST00000510951 GAKO14976 1311 aa12.62□□□□□ -0.39
NR1I3-227ENST00000510951 ADM5C9JUS6 153 aa12.61□□□□□ -0.39
NR1I3-227ENST00000510951 TOMM70O94826 608 aa12.61□□□□□ -0.39
NR1I3-227ENST00000510951 RGS3P49796 1198 aa12.61□□□□□ -0.39
NR1I3-227ENST00000510951 SLC9C2Q5TAH2 1124 aa12.61□□□□□ -0.39
NR1I3-227ENST00000510951 APOBEC3HQ6NTF7 200 aaKnown RBP12.61□□□□□ -0.39
NR1I3-227ENST00000510951 MIGA1Q8NAN2 632 aa12.61□□□□□ -0.39
NR1I3-227ENST00000510951 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
NR1I3-227ENST00000510951 RILPL2Q969X0 211 aa12.61□□□□□ -0.39
NR1I3-227ENST00000510951 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
NR1I3-227ENST00000510951 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
NR1I3-227ENST00000510951 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.61□□□□□ -0.39
NR1I3-227ENST00000510951 ZNF70Q9UC06 446 aaPredicted RBP12.61□□□□□ -0.39
NR1I3-227ENST00000510951 ZNF532Q9HCE3 1301 aa12.61□□□□□ -0.39
NR1I3-227ENST00000510951 TCP10L2B9ZVM9 353 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 LDHCP07864 332 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 TTC22Q5TAA0 569 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 CDC42EP5Q6NZY7 148 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 DLK2Q6UY11 383 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 KRT26Q7Z3Y9 468 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
NR1I3-227ENST00000510951 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
NR1I3-227ENST00000510951 NOL10Q9BSC4 688 aaKnown RBP12.6□□□□□ -0.39
NR1I3-227ENST00000510951 OSBPL3Q9H4L5 887 aa12.6□□□□□ -0.39
NR1I3-227ENST00000510951 AATFQ9NY61 560 aaKnown RBP eCLIP12.6□□□□□ -0.39
NR1I3-227ENST00000510951 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
NR1I3-227ENST00000510951 TRAF5O00463 557 aa12.59□□□□□ -0.39
NR1I3-227ENST00000510951 GSPT1P15170 499 aaKnown RBP12.59□□□□□ -0.39
NR1I3-227ENST00000510951 ADD2P35612 726 aa12.59□□□□□ -0.39
NR1I3-227ENST00000510951 DYNLL1P63167 89 aaKnown RBP12.59□□□□□ -0.39
NR1I3-227ENST00000510951 FMR1Q06787 632 aaKnown RBP eCLIP12.59□□□□□ -0.39
NR1I3-227ENST00000510951 APOBEC3FQ8IUX4 373 aaKnown RBP12.59□□□□□ -0.39
NR1I3-227ENST00000510951 SULF1Q8IWU6 871 aa12.59□□□□□ -0.39
NR1I3-227ENST00000510951 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
NR1I3-227ENST00000510951 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
NR1I3-227ENST00000510951 USP40Q9NVE5 1235 aa12.59□□□□□ -0.39
NR1I3-227ENST00000510951 TMOD2Q9NZR1 351 aa12.59□□□□□ -0.39
NR1I3-227ENST00000510951 PITPNM2Q9BZ72 1349 aa12.59□□□□□ -0.39
NR1I3-227ENST00000510951 GPR75-ASB3A0A0A6YYF3 556 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 PRAMEF18Q5VWM3 479 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 USP48Q86UV5 1035 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 SH3RF3Q8TEJ3 882 aaPredicted RBP12.58□□□□□ -0.4
NR1I3-227ENST00000510951 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 FAM163AQ96GL9 167 aaPredicted RBP12.58□□□□□ -0.4
NR1I3-227ENST00000510951 PGAP2Q9UHJ9 254 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 LAMB1P07942 1786 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 OTOFQ9HC10 1997 aa12.58□□□□□ -0.4
NR1I3-227ENST00000510951 RFX7Q2KHR2 1363 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 MYH8P13535 1937 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 MAGEB6P1A0A0J9YX57 407 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 HOXD11P31277 338 aaPredicted RBP12.57□□□□□ -0.4
NR1I3-227ENST00000510951 RHBDL3P58872 404 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 TCP10Q12799 353 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 NFIAQ12857 509 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 PICALMQ13492 652 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 ZSCAN25Q6NSZ9 544 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 CDC37L1Q7L3B6 337 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 TEX11Q8IYF3 940 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 ZNF408Q9H9D4 720 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 SIPA1L1O43166 1804 aa12.57□□□□□ -0.4
NR1I3-227ENST00000510951 CNTNAP1P78357 1384 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 RNF113AO15541 343 aaKnown RBP12.56□□□□□ -0.4
NR1I3-227ENST00000510951 IGSF3O75054 1194 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 MBD4O95243 580 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 BAG3O95817 575 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 FSTL1Q12841 308 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 TNFAIP1Q13829 316 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 UBE3CQ15386 1083 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 LCORLQ8N3X6 602 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 TMEM39BQ9GZU3 492 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 ARMT1Q9H993 441 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 DDX4Q9NQI0 724 aaKnown RBP12.56□□□□□ -0.4
NR1I3-227ENST00000510951 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
NR1I3-227ENST00000510951 M0R2C6 588 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 WDHD1O75717 1129 aaPredicted RBP12.55□□□□□ -0.4
NR1I3-227ENST00000510951 ITGBL1O95965 494 aaPredicted RBP12.55□□□□□ -0.4
NR1I3-227ENST00000510951 ZFYP08048 801 aaPredicted RBP12.55□□□□□ -0.4
NR1I3-227ENST00000510951 PLCG2P16885 1265 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 SDSP20132 328 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 TNNI2P48788 182 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 RASA3Q14644 834 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 LRRFIP1Q32MZ4 808 aaKnown RBP12.55□□□□□ -0.4
NR1I3-227ENST00000510951 CDAN1Q8IWY9 1227 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 APPBP2Q92624 585 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 CDCA5Q96FF9 252 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
NR1I3-227ENST00000510951 PUS7LQ9H0K6 701 aaKnown RBP12.55□□□□□ -0.4
NR1I3-227ENST00000510951 DEFB129Q9H1M3 183 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 FAM198AQ9UFP1 575 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 PAPPA2Q9BXP8 1791 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 SSC5DA1L4H1 1573 aa12.55□□□□□ -0.4
NR1I3-227ENST00000510951 ATAD5Q96QE3 1844 aa12.54□□□□□ -0.4
NR1I3-227ENST00000510951 PPP4CP60510 307 aa12.54□□□□□ -0.4
NR1I3-227ENST00000510951 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
NR1I3-227ENST00000510951 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms