RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 USP17L7P0C7H9 530 aa7.35□□□□□ -1.23
NFKB1-208ENST00000509165 SOX4Q06945 474 aaPredicted RBP7.35□□□□□ -1.23
NFKB1-208ENST00000509165 C12orf50Q8NA57 414 aaPredicted RBP7.35□□□□□ -1.23
NFKB1-208ENST00000509165 C2CD4AQ8NCU7 369 aaPredicted RBP7.35□□□□□ -1.23
NFKB1-208ENST00000509165 KRTAP4-2Q9BYR5 136 aa7.35□□□□□ -1.23
NFKB1-208ENST00000509165 CCDC86Q9H6F5 360 aaKnown RBP7.35□□□□□ -1.23
NFKB1-208ENST00000509165 HIF3AQ9Y2N7 669 aa7.35□□□□□ -1.23
NFKB1-208ENST00000509165 SYNGAP1Q96PV0 1343 aa7.34□□□□□ -1.23
NFKB1-208ENST00000509165 ARID1BQ8NFD5 2236 aaPredicted RBP7.34□□□□□ -1.23
NFKB1-208ENST00000509165 SART1O43290 800 aaKnown RBP7.34□□□□□ -1.23
NFKB1-208ENST00000509165 GSTP1P09211 210 aaKnown RBP7.34□□□□□ -1.23
NFKB1-208ENST00000509165 ADH5P11766 374 aa7.34□□□□□ -1.23
NFKB1-208ENST00000509165 BMP3P12645 472 aa7.34□□□□□ -1.23
NFKB1-208ENST00000509165 ERCC3P19447 782 aa7.34□□□□□ -1.23
NFKB1-208ENST00000509165 FGD1P98174 961 aa7.34□□□□□ -1.23
NFKB1-208ENST00000509165 PPP2R3AQ06190 1150 aa7.34□□□□□ -1.23
NFKB1-208ENST00000509165 WDR18Q9BV38 432 aa7.34□□□□□ -1.23
NFKB1-208ENST00000509165 GSX1Q9H4S2 264 aaPredicted RBP7.34□□□□□ -1.23
NFKB1-208ENST00000509165 AK5Q9Y6K8 562 aa7.34□□□□□ -1.23
NFKB1-208ENST00000509165 SHROOM4Q9ULL8 1493 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 COL17A1Q9UMD9 1497 aaPredicted RBP7.33□□□□□ -1.24
NFKB1-208ENST00000509165 ZNF862O60290 1169 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 AOC2O75106 756 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 PAGE1O75459 146 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 FSTP19883 344 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 NME2P22392 152 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 TAGLNQ01995 201 aaKnown RBP7.33□□□□□ -1.24
NFKB1-208ENST00000509165 ZNF252P-AS1Q0IIN9 211 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 SGO2Q562F6 1265 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 HP1BP3Q5SSJ5 553 aaPredicted RBP7.33□□□□□ -1.24
NFKB1-208ENST00000509165 TPTE2Q6XPS3 522 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 CLEC10AQ8IUN9 316 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 SULF2Q8IWU5 870 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 WDR89Q96FK6 387 aaPredicted RBP7.33□□□□□ -1.24
NFKB1-208ENST00000509165 C7orf69Q9H7B7 122 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 KRT82Q9NSB4 513 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 CACNA2D2Q9NY47 1150 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 STOML1Q9UBI4 398 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 PARP2Q9UGN5 583 aa7.33□□□□□ -1.24
NFKB1-208ENST00000509165 HMX2A2RU54 273 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 FBXO24O75426 580 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 LIG1P18858 919 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 BMP6P22004 513 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 EIF4BP23588 611 aaKnown RBP7.32□□□□□ -1.24
NFKB1-208ENST00000509165 ARNTP27540 789 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 DAB2P98082 770 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 FZD5Q13467 585 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 CDPF1Q6NVV7 123 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 SLC51AQ86UW1 340 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 TRIM42Q8IWZ5 723 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 FMNL2Q96PY5 1086 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 FAM83CQ9BQN1 747 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 PCDHGC5Q9Y5F6 944 aa7.32□□□□□ -1.24
NFKB1-208ENST00000509165 GAS2O43903 313 aaKnown RBP7.31□□□□□ -1.24
NFKB1-208ENST00000509165 PDE3AQ14432 1141 aa7.31□□□□□ -1.24
NFKB1-208ENST00000509165 AKAP4Q5JQC9 854 aa7.31□□□□□ -1.24
NFKB1-208ENST00000509165 RASIP1Q5U651 963 aa7.31□□□□□ -1.24
NFKB1-208ENST00000509165 BEND4Q6ZU67 534 aa7.31□□□□□ -1.24
NFKB1-208ENST00000509165 ZC3H12CQ9C0D7 883 aaKnown RBP7.31□□□□□ -1.24
NFKB1-208ENST00000509165 CEP44Q9C0F1 390 aa7.31□□□□□ -1.24
NFKB1-208ENST00000509165 PPP1R9AQ9ULJ8 1098 aa7.31□□□□□ -1.24
NFKB1-208ENST00000509165 ACTL7BQ9Y614 415 aa7.31□□□□□ -1.24
NFKB1-208ENST00000509165 CELA3AP09093 270 aa7.3□□□□□ -1.24
NFKB1-208ENST00000509165 MAP4P27816 1152 aaKnown RBP7.3□□□□□ -1.24
NFKB1-208ENST00000509165 KIF4BQ2VIQ3 1234 aa7.3□□□□□ -1.24
NFKB1-208ENST00000509165 TMC4Q7Z404 712 aa7.3□□□□□ -1.24
NFKB1-208ENST00000509165 EZH1Q92800 747 aaPredicted RBP7.3□□□□□ -1.24
NFKB1-208ENST00000509165 RAD18Q9NS91 495 aa7.3□□□□□ -1.24
NFKB1-208ENST00000509165 ZBTB7CA1YPR0 619 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 TMPRSS2O15393 492 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 IGLV1-40P01703 118 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 CTSHP09668 335 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 RNF43Q68DV7 783 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 MPRIPQ6WCQ1 1025 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 GRIN3AQ8TCU5 1115 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 FBLIM1Q8WUP2 373 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 FAM161BQ96MY7 647 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 KCNF1Q9H3M0 494 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 FAM105AQ9NUU6 356 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 ERCC6Q03468 1493 aa7.29□□□□□ -1.24
NFKB1-208ENST00000509165 NFIAQ12857 509 aa7.28□□□□□ -1.24
NFKB1-208ENST00000509165 KCNB2Q92953 911 aa7.28□□□□□ -1.24
NFKB1-208ENST00000509165 EMILIN2Q9BXX0 1053 aa7.28□□□□□ -1.24
NFKB1-208ENST00000509165 ACSS3Q9H6R3 686 aa7.28□□□□□ -1.24
NFKB1-208ENST00000509165 CRIM1Q9NZV1 1036 aa7.28□□□□□ -1.24
NFKB1-208ENST00000509165 TTF2Q9UNY4 1162 aaKnown RBP7.28□□□□□ -1.24
NFKB1-208ENST00000509165 GSC2O15499 205 aa7.27□□□□□ -1.25
NFKB1-208ENST00000509165 USP11P51784 963 aa7.27□□□□□ -1.25
NFKB1-208ENST00000509165 TMCO4Q5TGY1 634 aa7.27□□□□□ -1.25
NFKB1-208ENST00000509165 MEI1Q5TIA1 1274 aa7.27□□□□□ -1.25
NFKB1-208ENST00000509165 MAP1SQ66K74 1059 aaPredicted RBP7.27□□□□□ -1.25
NFKB1-208ENST00000509165 SV2BQ7L1I2 683 aa7.27□□□□□ -1.25
NFKB1-208ENST00000509165 DYMQ7RTS9 669 aa7.27□□□□□ -1.25
NFKB1-208ENST00000509165 GPBAR1Q8TDU6 330 aa7.27□□□□□ -1.25
NFKB1-208ENST00000509165 AP4E1Q9UPM8 1137 aa7.27□□□□□ -1.25
NFKB1-208ENST00000509165 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.26□□□□□ -1.25
NFKB1-208ENST00000509165 FAM95CA0A1B0GW59 222 aa7.26□□□□□ -1.25
NFKB1-208ENST00000509165 ASPAP45381 313 aa7.26□□□□□ -1.25
NFKB1-208ENST00000509165 PSMD2Q13200 908 aa7.26□□□□□ -1.25
NFKB1-208ENST00000509165 ZC3H12AQ5D1E8 599 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms