RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	USP17L7	P0C7H9	530 aa		7.35	□□□□□ -1.23
NFKB1-208	ENST00000509165	SOX4	Q06945	474 aa	Predicted RBP	7.35	□□□□□ -1.23
NFKB1-208	ENST00000509165	C12orf50	Q8NA57	414 aa	Predicted RBP	7.35	□□□□□ -1.23
NFKB1-208	ENST00000509165	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.35	□□□□□ -1.23
NFKB1-208	ENST00000509165	KRTAP4-2	Q9BYR5	136 aa		7.35	□□□□□ -1.23
NFKB1-208	ENST00000509165	CCDC86	Q9H6F5	360 aa	Known RBP	7.35	□□□□□ -1.23
NFKB1-208	ENST00000509165	HIF3A	Q9Y2N7	669 aa		7.35	□□□□□ -1.23
NFKB1-208	ENST00000509165	SYNGAP1	Q96PV0	1343 aa		7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	SART1	O43290	800 aa	Known RBP	7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	GSTP1	P09211	210 aa	Known RBP	7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	ADH5	P11766	374 aa		7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	BMP3	P12645	472 aa		7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	ERCC3	P19447	782 aa		7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	FGD1	P98174	961 aa		7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	PPP2R3A	Q06190	1150 aa		7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	WDR18	Q9BV38	432 aa		7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	GSX1	Q9H4S2	264 aa	Predicted RBP	7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	AK5	Q9Y6K8	562 aa		7.34	□□□□□ -1.23
NFKB1-208	ENST00000509165	SHROOM4	Q9ULL8	1493 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	ZNF862	O60290	1169 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	AOC2	O75106	756 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	PAGE1	O75459	146 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	FST	P19883	344 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	NME2	P22392	152 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	TAGLN	Q01995	201 aa	Known RBP	7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	ZNF252P-AS1	Q0IIN9	211 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	SGO2	Q562F6	1265 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	TPTE2	Q6XPS3	522 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	CLEC10A	Q8IUN9	316 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	SULF2	Q8IWU5	870 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	WDR89	Q96FK6	387 aa	Predicted RBP	7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	C7orf69	Q9H7B7	122 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	KRT82	Q9NSB4	513 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	CACNA2D2	Q9NY47	1150 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	STOML1	Q9UBI4	398 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	PARP2	Q9UGN5	583 aa		7.33	□□□□□ -1.24
NFKB1-208	ENST00000509165	HMX2	A2RU54	273 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	FBXO24	O75426	580 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	LIG1	P18858	919 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	BMP6	P22004	513 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	EIF4B	P23588	611 aa	Known RBP	7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	ARNT	P27540	789 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	DAB2	P98082	770 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	FZD5	Q13467	585 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	CDPF1	Q6NVV7	123 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	SLC51A	Q86UW1	340 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	TRIM42	Q8IWZ5	723 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	FMNL2	Q96PY5	1086 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	FAM83C	Q9BQN1	747 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	PCDHGC5	Q9Y5F6	944 aa		7.32	□□□□□ -1.24
NFKB1-208	ENST00000509165	GAS2	O43903	313 aa	Known RBP	7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	PDE3A	Q14432	1141 aa		7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	AKAP4	Q5JQC9	854 aa		7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	RASIP1	Q5U651	963 aa		7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	BEND4	Q6ZU67	534 aa		7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	ZC3H12C	Q9C0D7	883 aa	Known RBP	7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	CEP44	Q9C0F1	390 aa		7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	PPP1R9A	Q9ULJ8	1098 aa		7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	ACTL7B	Q9Y614	415 aa		7.31	□□□□□ -1.24
NFKB1-208	ENST00000509165	CELA3A	P09093	270 aa		7.3	□□□□□ -1.24
NFKB1-208	ENST00000509165	MAP4	P27816	1152 aa	Known RBP	7.3	□□□□□ -1.24
NFKB1-208	ENST00000509165	KIF4B	Q2VIQ3	1234 aa		7.3	□□□□□ -1.24
NFKB1-208	ENST00000509165	TMC4	Q7Z404	712 aa		7.3	□□□□□ -1.24
NFKB1-208	ENST00000509165	EZH1	Q92800	747 aa	Predicted RBP	7.3	□□□□□ -1.24
NFKB1-208	ENST00000509165	RAD18	Q9NS91	495 aa		7.3	□□□□□ -1.24
NFKB1-208	ENST00000509165	ZBTB7C	A1YPR0	619 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	TMPRSS2	O15393	492 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	IGLV1-40	P01703	118 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	CTSH	P09668	335 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	RNF43	Q68DV7	783 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	MPRIP	Q6WCQ1	1025 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	GRIN3A	Q8TCU5	1115 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	FBLIM1	Q8WUP2	373 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	FAM161B	Q96MY7	647 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	KCNF1	Q9H3M0	494 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	FAM105A	Q9NUU6	356 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	ERCC6	Q03468	1493 aa		7.29	□□□□□ -1.24
NFKB1-208	ENST00000509165	NFIA	Q12857	509 aa		7.28	□□□□□ -1.24
NFKB1-208	ENST00000509165	KCNB2	Q92953	911 aa		7.28	□□□□□ -1.24
NFKB1-208	ENST00000509165	EMILIN2	Q9BXX0	1053 aa		7.28	□□□□□ -1.24
NFKB1-208	ENST00000509165	ACSS3	Q9H6R3	686 aa		7.28	□□□□□ -1.24
NFKB1-208	ENST00000509165	CRIM1	Q9NZV1	1036 aa		7.28	□□□□□ -1.24
NFKB1-208	ENST00000509165	TTF2	Q9UNY4	1162 aa	Known RBP	7.28	□□□□□ -1.24
NFKB1-208	ENST00000509165	GSC2	O15499	205 aa		7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	USP11	P51784	963 aa		7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	TMCO4	Q5TGY1	634 aa		7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	MEI1	Q5TIA1	1274 aa		7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	MAP1S	Q66K74	1059 aa	Predicted RBP	7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	SV2B	Q7L1I2	683 aa		7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	DYM	Q7RTS9	669 aa		7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	GPBAR1	Q8TDU6	330 aa		7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	AP4E1	Q9UPM8	1137 aa		7.27	□□□□□ -1.25
NFKB1-208	ENST00000509165	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.26	□□□□□ -1.25
NFKB1-208	ENST00000509165	FAM95C	A0A1B0GW59	222 aa		7.26	□□□□□ -1.25
NFKB1-208	ENST00000509165	ASPA	P45381	313 aa		7.26	□□□□□ -1.25
NFKB1-208	ENST00000509165	PSMD2	Q13200	908 aa		7.26	□□□□□ -1.25
NFKB1-208	ENST00000509165	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms