RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 ZNF252P-AS1Q0IIN9 211 aa9.6□□□□□ -0.87
GYPB-210ENST00000508841 DUOXA2Q1HG44 320 aa9.6□□□□□ -0.87
GYPB-210ENST00000508841 FOXD4L6Q3SYB3 417 aaPredicted RBP9.6□□□□□ -0.87
GYPB-210ENST00000508841 C9orf131Q5VYM1 1079 aa9.6□□□□□ -0.87
GYPB-210ENST00000508841 FOXD4L3Q6VB84 417 aaPredicted RBP9.6□□□□□ -0.87
GYPB-210ENST00000508841 PDZD3Q86UT5 571 aa9.6□□□□□ -0.87
GYPB-210ENST00000508841 TRIM42Q8IWZ5 723 aa9.6□□□□□ -0.87
GYPB-210ENST00000508841 C8orf37Q96NL8 207 aa9.6□□□□□ -0.87
GYPB-210ENST00000508841 GNL2Q13823 731 aaKnown RBP9.59□□□□□ -0.87
GYPB-210ENST00000508841 ZNF394Q53GI3 561 aa9.59□□□□□ -0.87
GYPB-210ENST00000508841 COPRSQ9NQ92 184 aa9.59□□□□□ -0.87
GYPB-210ENST00000508841 KCNQ5Q9NR82 932 aa9.59□□□□□ -0.87
GYPB-210ENST00000508841 SYNGAP1Q96PV0 1343 aa9.58□□□□□ -0.88
GYPB-210ENST00000508841 LOC100289279A0A1B0GTE1 492 aa9.58□□□□□ -0.88
GYPB-210ENST00000508841 EIF4A3P38919 411 aaKnown RBP9.58□□□□□ -0.88
GYPB-210ENST00000508841 NRG1Q02297 640 aaPredicted RBP9.58□□□□□ -0.88
GYPB-210ENST00000508841 KRTAP1-3Q8IUG1 177 aa9.58□□□□□ -0.88
GYPB-210ENST00000508841 KCNB2Q92953 911 aa9.58□□□□□ -0.88
GYPB-210ENST00000508841 SPATA32Q96LK8 384 aa9.58□□□□□ -0.88
GYPB-210ENST00000508841 SUPT16HQ9Y5B9 1047 aaKnown RBP9.58□□□□□ -0.88
GYPB-210ENST00000508841 MINDY4BA8MYZ0 360 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 ADAM11O75078 769 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 APBA3O96018 575 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 TFE3P19532 575 aaPredicted RBP9.57□□□□□ -0.88
GYPB-210ENST00000508841 CAMK2GQ13555 558 aaPredicted RBP9.57□□□□□ -0.88
GYPB-210ENST00000508841 PDE3AQ14432 1141 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 SNAP47Q5SQN1 464 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 MAP1SQ66K74 1059 aaPredicted RBP9.57□□□□□ -0.88
GYPB-210ENST00000508841 KIAA0825Q8IV33 1275 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 STK35Q8TDR2 534 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 TLR6Q9Y2C9 796 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 PCDHGB7Q9Y5F8 929 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 ROBO2Q9HCK4 1378 aa9.57□□□□□ -0.88
GYPB-210ENST00000508841 MEGF11A6BM72 1044 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 C9orf172C9J069 976 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 PF4P02776 101 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 RACK1P63244 317 aaKnown RBP9.56□□□□□ -0.88
GYPB-210ENST00000508841 EXOSC6Q5RKV6 272 aaKnown RBP9.56□□□□□ -0.88
GYPB-210ENST00000508841 TMEM130Q8N3G9 435 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 ACSBG1Q96GR2 724 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 SPON2Q9BUD6 331 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 RUSC1Q9BVN2 902 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 RNF208Q9H0X6 261 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 CACNA2D2Q9NY47 1150 aa9.56□□□□□ -0.88
GYPB-210ENST00000508841 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
GYPB-210ENST00000508841 DDX3YO15523 660 aaKnown RBP9.55□□□□□ -0.88
GYPB-210ENST00000508841 SLFN14P0C7P3 912 aa9.55□□□□□ -0.88
GYPB-210ENST00000508841 ACAD11Q709F0 780 aa9.55□□□□□ -0.88
GYPB-210ENST00000508841 LENG1Q96BZ8 264 aaPredicted RBP9.55□□□□□ -0.88
GYPB-210ENST00000508841 CYP4F12Q9HCS2 524 aa9.55□□□□□ -0.88
GYPB-210ENST00000508841 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
GYPB-210ENST00000508841 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.54□□□□□ -0.88
GYPB-210ENST00000508841 GRIN3AQ8TCU5 1115 aa9.54□□□□□ -0.88
GYPB-210ENST00000508841 UBASH3BQ8TF42 649 aa9.54□□□□□ -0.88
GYPB-210ENST00000508841 ZNF296Q8WUU4 475 aaPredicted RBP9.54□□□□□ -0.88
GYPB-210ENST00000508841 NT5C1AQ9BXI3 368 aa9.54□□□□□ -0.88
GYPB-210ENST00000508841 CCDC86Q9H6F5 360 aaKnown RBP9.54□□□□□ -0.88
GYPB-210ENST00000508841 BPNT1O95861 308 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 KIF4BQ2VIQ3 1234 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 RASIP1Q5U651 963 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 GOLM1Q8NBJ4 401 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 GATAD2BQ8WXI9 593 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 GAL3ST3Q96A11 431 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 TMPRSS13Q9BYE2 586 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 SUGCTQ9HAC7 445 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 RAD18Q9NS91 495 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 ADAMTS1Q9UHI8 967 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 INPP5FQ9Y2H2 1132 aa9.53□□□□□ -0.88
GYPB-210ENST00000508841 C1QTNF9BB2RNN3 333 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 F6X3S4 739 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 GREM1O60565 184 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 GARTP22102 1010 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 NUTM2GQ5VZR2 741 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 ANKRD34AQ69YU3 496 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 FBXL19Q6PCT2 694 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 FAM196AQ6ZSG2 479 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 GPBAR1Q8TDU6 330 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 LRRC3Q9BY71 257 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 ZC3H12CQ9C0D7 883 aaKnown RBP9.52□□□□□ -0.89
GYPB-210ENST00000508841 ACBD3Q9H3P7 528 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 USP21Q9UK80 565 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 PCDHB5Q9Y5E4 795 aa9.52□□□□□ -0.89
GYPB-210ENST00000508841 AOC2O75106 756 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 ECEL1O95672 775 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 GJA8P48165 433 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 FAM160A1Q05DH4 1040 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 COL9A2Q14055 689 aaPredicted RBP9.51□□□□□ -0.89
GYPB-210ENST00000508841 MPP2Q14168 576 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 GRIK4Q16099 956 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 KIAA1211Q6ZU35 1233 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 VPS37DQ86XT2 251 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 SLC43A3Q8NBI5 491 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 SMG8Q8ND04 991 aaKnown RBP9.51□□□□□ -0.89
GYPB-210ENST00000508841 CEP41Q9BYV8 373 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 AKTIPQ9H8T0 292 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 SNCAIPQ9Y6H5 919 aa9.51□□□□□ -0.89
GYPB-210ENST00000508841 F8W735 103 aaPredicted RBP9.5□□□□□ -0.89
GYPB-210ENST00000508841 WISP1O95388 367 aa9.5□□□□□ -0.89
GYPB-210ENST00000508841 CTSBP07858 339 aa9.5□□□□□ -0.89
GYPB-210ENST00000508841 SELPP16109 830 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms