RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 GPAA1O43292 621 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
PROM1-207ENST00000508167 CNOT7Q9UIV1 285 aaKnown RBP13.09□□□□□ -0.31
PROM1-207ENST00000508167 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 CRKP46108 304 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
PROM1-207ENST00000508167 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 GOLGB1Q14789 3259 aaKnown RBP13.09□□□□□ -0.31
PROM1-207ENST00000508167 DYNLL1P63167 89 aaKnown RBP13.09□□□□□ -0.31
PROM1-207ENST00000508167 CFAP100Q494V2 611 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 EAPPQ56P03 285 aaPredicted RBP13.09□□□□□ -0.31
PROM1-207ENST00000508167 TEX11Q8IYF3 940 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
PROM1-207ENST00000508167 HELLSQ9NRZ9 838 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 USP40Q9NVE5 1235 aa13.09□□□□□ -0.31
PROM1-207ENST00000508167 PLCG2P16885 1265 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 OSBP2Q969R2 916 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 SUGT1Q9Y2Z0 365 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 TAF6LQ9Y6J9 622 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 ZNF541Q9H0D2 1346 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 NAPBQ9H115 298 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
PROM1-207ENST00000508167 CLRN2A0PK11 232 aa13.08□□□□□ -0.32
PROM1-207ENST00000508167 VIL1P09327 827 aaKnown RBP13.08□□□□□ -0.32
PROM1-207ENST00000508167 PDS5AQ29RF7 1337 aaKnown RBP13.07□□□□□ -0.32
PROM1-207ENST00000508167 MINDY4BA8MYZ0 360 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 NECTIN1Q15223 517 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 CCDC171Q6TFL3 1326 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 IRS2Q9Y4H2 1338 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 POLR3DP05423 398 aaPredicted RBP13.07□□□□□ -0.32
PROM1-207ENST00000508167 GPC2Q8N158 579 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 TCP10Q12799 353 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 TMX3Q96JJ7 454 aa13.07□□□□□ -0.32
PROM1-207ENST00000508167 SALL1Q9NSC2 1324 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 FZD9O00144 591 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 RPS12P25398 132 aaKnown RBP13.06□□□□□ -0.32
PROM1-207ENST00000508167 PRELPP51888 382 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 TGFBRAP1Q8WUH2 860 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 ECM29Q5VYK3 1845 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 M0R2C6 588 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 SDR42E1Q8WUS8 393 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 TDRD3Q9H7E2 651 aaKnown RBP13.06□□□□□ -0.32
PROM1-207ENST00000508167 DAGLAQ9Y4D2 1042 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 RFX7Q2KHR2 1363 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 MROH7-TTC4A0A0A0MT08 1334 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 CACNB3P54284 484 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 MAPKAPK5Q8IW41 473 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 LCORLQ8N3X6 602 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
PROM1-207ENST00000508167 MCM9Q9NXL9 1143 aa13.05□□□□□ -0.32
PROM1-207ENST00000508167 TCP10L2B9ZVM9 353 aa13.05□□□□□ -0.32
PROM1-207ENST00000508167 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
PROM1-207ENST00000508167 ADCK5Q3MIX3 580 aa13.05□□□□□ -0.32
PROM1-207ENST00000508167 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
PROM1-207ENST00000508167 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
PROM1-207ENST00000508167 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
PROM1-207ENST00000508167 GNAT2P19087 354 aa13.05□□□□□ -0.32
PROM1-207ENST00000508167 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
PROM1-207ENST00000508167 COL1A1P02452 1464 aaPredicted RBP13.05□□□□□ -0.32
PROM1-207ENST00000508167 PRKAB2O43741 272 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 HAND2P61296 217 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 FGD1P98174 961 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 MYOZ2Q9NPC6 264 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 EPS15P42566 896 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 KIF4BQ2VIQ3 1234 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
PROM1-207ENST00000508167 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
PROM1-207ENST00000508167 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 ADGRA1Q86SQ6 560 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 SH3RF3Q8TEJ3 882 aaPredicted RBP13.04□□□□□ -0.32
PROM1-207ENST00000508167 SERPINA10Q9UK55 444 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 SHTN1A0MZ66 631 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 LARGE1O95461 756 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 RRP12Q5JTH9 1297 aaKnown RBP13.04□□□□□ -0.32
PROM1-207ENST00000508167 HHIPL2Q6UWX4 724 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 CERS3Q8IU89 383 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 HACL1Q9UJ83 578 aa13.04□□□□□ -0.32
PROM1-207ENST00000508167 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 IQCA1LA6NCM1 817 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 TRAK2O60296 914 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
PROM1-207ENST00000508167 DPF2Q92785 391 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 MAP4K1Q92918 833 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 PRMT6Q96LA8 375 aaPredicted RBP13.03□□□□□ -0.32
PROM1-207ENST00000508167 IMMTQ16891 758 aaKnown RBP13.03□□□□□ -0.32
PROM1-207ENST00000508167 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 FOXP2O15409 715 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 SLC3A2P08195 630 aaKnown RBP13.03□□□□□ -0.32
PROM1-207ENST00000508167 TRDNQ13061 729 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
PROM1-207ENST00000508167 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
PROM1-207ENST00000508167 SCAF8Q9UPN6 1271 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms