RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 GTF3C3Q9Y5Q9 886 aa15.55■□□□□ 0.08
TCOF1-210ENST00000506767 ZNF532Q9HCE3 1301 aa15.54■□□□□ 0.08
TCOF1-210ENST00000506767 MYO1BO43795 1136 aa15.54■□□□□ 0.08
TCOF1-210ENST00000506767 CHGBP05060 677 aa15.54■□□□□ 0.08
TCOF1-210ENST00000506767 ZFYP08048 801 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-210ENST00000506767 BTDP43251 543 aa15.54■□□□□ 0.08
TCOF1-210ENST00000506767 ANGEL2Q5VTE6 544 aaKnown RBP15.54■□□□□ 0.08
TCOF1-210ENST00000506767 CDC42EP5Q6NZY7 148 aa15.54■□□□□ 0.08
TCOF1-210ENST00000506767 CNTROBQ8N137 903 aa15.54■□□□□ 0.08
TCOF1-210ENST00000506767 ZNF70Q9UC06 446 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-210ENST00000506767 POLR2AP24928 1970 aaKnown RBP15.53■□□□□ 0.08
TCOF1-210ENST00000506767 RFX7Q2KHR2 1363 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 AK9Q5TCS8 1911 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 TRIM6-TRIM34B2RNG4 842 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 RNF113AO15541 343 aaKnown RBP15.53■□□□□ 0.08
TCOF1-210ENST00000506767 RGS3P49796 1198 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 RHBDL3P58872 404 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 SLFNL1Q499Z3 407 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 CHADLQ6NUI6 762 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 RBM46Q8TBY0 533 aaKnown RBP15.53■□□□□ 0.08
TCOF1-210ENST00000506767 FSD1Q9BTV5 496 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 GGA3Q9NZ52 723 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
TCOF1-210ENST00000506767 CLRN2A0PK11 232 aa15.52■□□□□ 0.08
TCOF1-210ENST00000506767 BAG3O95817 575 aa15.52■□□□□ 0.08
TCOF1-210ENST00000506767 SDSP20132 328 aa15.52■□□□□ 0.08
TCOF1-210ENST00000506767 APLP1P51693 650 aa15.52■□□□□ 0.08
TCOF1-210ENST00000506767 LRRFIP1Q32MZ4 808 aaKnown RBP15.52■□□□□ 0.08
TCOF1-210ENST00000506767 FKBP1CQ5VVH2 108 aa15.52■□□□□ 0.08
TCOF1-210ENST00000506767 RILPL2Q969X0 211 aa15.52■□□□□ 0.08
TCOF1-210ENST00000506767 DCPSQ96C86 337 aaKnown RBP15.52■□□□□ 0.08
TCOF1-210ENST00000506767 RIOK1Q9BRS2 568 aaKnown RBP15.52■□□□□ 0.08
TCOF1-210ENST00000506767 USP40Q9NVE5 1235 aa15.52■□□□□ 0.08
TCOF1-210ENST00000506767 AATFQ9NY61 560 aaKnown RBP eCLIP15.52■□□□□ 0.08
TCOF1-210ENST00000506767 HTRA3P83110 453 aa15.51■□□□□ 0.07
TCOF1-210ENST00000506767 MAP1SQ66K74 1059 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-210ENST00000506767 CERS3Q8IU89 383 aa15.51■□□□□ 0.07
TCOF1-210ENST00000506767 APOBEC3FQ8IUX4 373 aaKnown RBP15.51■□□□□ 0.07
TCOF1-210ENST00000506767 APPBP2Q92624 585 aa15.51■□□□□ 0.07
TCOF1-210ENST00000506767 IDI2Q9BXS1 227 aa15.51■□□□□ 0.07
TCOF1-210ENST00000506767 PUS7LQ9H0K6 701 aaKnown RBP15.51■□□□□ 0.07
TCOF1-210ENST00000506767 WDHD1O75717 1129 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-210ENST00000506767 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-210ENST00000506767 PLCG2P16885 1265 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 DYNLL1P63167 89 aaKnown RBP15.5■□□□□ 0.07
TCOF1-210ENST00000506767 BMP2KLQ5H9B9 411 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 ZMYM1Q5SVZ6 1142 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 CDC37L1Q7L3B6 337 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 MIGA1Q8NAN2 632 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 SMC1BQ8NDV3 1235 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 SH3RF3Q8TEJ3 882 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-210ENST00000506767 OSBP2Q969R2 916 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 NOL10Q9BSC4 688 aaKnown RBP15.5■□□□□ 0.07
TCOF1-210ENST00000506767 CDK5RAP2Q96SN8 1893 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 FOCADQ5VW36 1801 aa15.5■□□□□ 0.07
TCOF1-210ENST00000506767 MAGEB6P1A0A0J9YX57 407 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
TCOF1-210ENST00000506767 CACNB3P54284 484 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 FSTL1Q12841 308 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 NFIAQ12857 509 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 FAM83AQ86UY5 434 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 VEZTQ9HBM0 779 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 TMOD2Q9NZR1 351 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 FAM198AQ9UFP1 575 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 SCAF8Q9UPN6 1271 aaKnown RBP15.49■□□□□ 0.07
TCOF1-210ENST00000506767 CNTNAP1P78357 1384 aa15.49■□□□□ 0.07
TCOF1-210ENST00000506767 TCP10L2B9ZVM9 353 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 ADM5C9JUS6 153 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 TNFAIP1Q13829 316 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 KRT26Q7Z3Y9 468 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 USP48Q86UV5 1035 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 SULF1Q8IWU6 871 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 LCORLQ8N3X6 602 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 GLIS2Q9BZE0 524 aaPredicted RBP15.48■□□□□ 0.07
TCOF1-210ENST00000506767 DEFB129Q9H1M3 183 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
TCOF1-210ENST00000506767 PPP2R3BQ9Y5P8 575 aa15.48■□□□□ 0.07
TCOF1-210ENST00000506767 M0R2C6 588 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 HIP1O00291 1037 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 ENTPD3O75355 529 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 TNNI2P48788 182 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 RASA3Q14644 834 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 TEX11Q8IYF3 940 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 FAM151AQ8WW52 585 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 STRBPQ96SI9 672 aaKnown RBP15.47■□□□□ 0.07
TCOF1-210ENST00000506767 SEC62Q99442 399 aaKnown RBP15.47■□□□□ 0.07
TCOF1-210ENST00000506767 ARMT1Q9H993 441 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 HELLSQ9NRZ9 838 aa15.47■□□□□ 0.07
TCOF1-210ENST00000506767 PASKQ96RG2 1323 aa15.46■□□□□ 0.07
TCOF1-210ENST00000506767 MBD4O95243 580 aa15.46■□□□□ 0.07
TCOF1-210ENST00000506767 NMIQ13287 307 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-210ENST00000506767 DLK2Q6UY11 383 aa15.46■□□□□ 0.07
TCOF1-210ENST00000506767 ZFPM1Q8IX07 1006 aa15.46■□□□□ 0.07
TCOF1-210ENST00000506767 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
TCOF1-210ENST00000506767 FAM227BQ96M60 508 aa15.46■□□□□ 0.07
TCOF1-210ENST00000506767 TEPSINQ96N21 525 aa15.46■□□□□ 0.07
TCOF1-210ENST00000506767 MKRN1Q9UHC7 482 aaKnown RBP15.46■□□□□ 0.07
TCOF1-210ENST00000506767 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-210ENST00000506767 A0A0D9SFI3 127 aa15.45■□□□□ 0.06
TCOF1-210ENST00000506767 TRAF5O00463 557 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms