RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 DPYDQ12882 1025 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 ACCSLQ4AC99 568 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 FAM102BQ5T8I3 360 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 DENND2CQ68D51 928 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 ZNF449Q6P9G9 518 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 DACT3Q96B18 629 aaPredicted RBP5.84□□□□□ -1.47
MATR3-211ENST00000505625 C8orf76Q96K31 380 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 TRPC7Q9HCX4 862 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 SERTAD1Q9UHV2 236 aa5.84□□□□□ -1.47
MATR3-211ENST00000505625 ANGEL1Q9UNK9 670 aaKnown RBP5.84□□□□□ -1.47
MATR3-211ENST00000505625 IRS4O14654 1257 aaPredicted RBP5.84□□□□□ -1.48
MATR3-211ENST00000505625 CCNT1O60563 726 aaKnown RBP5.84□□□□□ -1.48
MATR3-211ENST00000505625 SAT1P21673 171 aa5.84□□□□□ -1.48
MATR3-211ENST00000505625 IQCEQ6IPM2 695 aa5.84□□□□□ -1.48
MATR3-211ENST00000505625 CCDC102AQ96A19 550 aa5.84□□□□□ -1.48
MATR3-211ENST00000505625 USTQ9Y2C2 406 aa5.84□□□□□ -1.48
MATR3-211ENST00000505625 CUX1P39880 1505 aa5.84□□□□□ -1.48
MATR3-211ENST00000505625 KIF7Q2M1P5 1343 aa5.84□□□□□ -1.48
MATR3-211ENST00000505625 KBTBD13C9JR72 458 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 LETM1O95202 739 aaPredicted RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 RRP1P56182 461 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 WTAPQ15007 396 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 NBPF1Q3BBV0 1214 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 NCAPH2Q6IBW4 605 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 GOLGA6L9A6NEM1 432 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 CCDC160A6NGH7 325 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 SUPT3HB4E1H0 165 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 CASQ1P31415 396 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 METAP2P50579 478 aaKnown RBP eCLIP5.83□□□□□ -1.48
MATR3-211ENST00000505625 PPP2R5AQ15172 486 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 HSP90AA4PQ58FG1 418 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 MIGA2Q7L4E1 593 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 NFATC2IPQ8NCF5 419 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 DENND3A2RUS2 1198 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 DEKP35659 375 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 CAVIN1Q6NZI2 390 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 LEKR1Q6ZMV7 388 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 EXOC6Q8TAG9 804 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 HACD3Q9P035 362 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 PARP1P09874 1014 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 SP100P23497 879 aaPredicted RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 UBA7P41226 1012 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 SLC12A1Q13621 1099 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 LRRC23Q53EV4 343 aaPredicted RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 SPECC1Q5M775 1068 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 CCDC83Q8IWF9 413 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 CNNM3Q8NE01 707 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 FAM8A1Q9UBU6 413 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 PNMA2Q9UL42 364 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 VPS8Q8N3P4 1428 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 FRMPD2Q68DX3 1309 aaPredicted RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 CBFA2T2O43439 604 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 AP1G2O75843 785 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 IREB2P48200 963 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 BRD3Q15059 726 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 PRPF40BQ6NWY9 871 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 SCYL2Q6P3W7 929 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 ARHGEF1Q92888 912 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 CDK13Q14004 1512 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 CASP2P42575 452 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 UBXN2AP68543 259 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 GOLGA8FQ08AF8 430 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 GOLGA8DPQ0D2H9 430 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 METTL23Q86XA0 190 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 SECISBP2LQ93073 1101 aaKnown RBP5.83□□□□□ -1.48
MATR3-211ENST00000505625 PNMA5Q96PV4 448 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 ANAPC4Q9UJX5 808 aa5.83□□□□□ -1.48
MATR3-211ENST00000505625 SMTNP53814 917 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 LMBR1LQ6UX01 489 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 NSRP1Q9H0G5 558 aaKnown RBP5.82□□□□□ -1.48
MATR3-211ENST00000505625 NFKBIL1Q9UBC1 381 aaPredicted RBP5.82□□□□□ -1.48
MATR3-211ENST00000505625 MTUS1Q9ULD2 1270 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 PHLDB1Q86UU1 1377 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 UHRF1BP1Q6BDS2 1440 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 FLOT1O75955 427 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 SNRPA1P09661 255 aaKnown RBP5.82□□□□□ -1.48
MATR3-211ENST00000505625 RAD51AP2Q09MP3 1159 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 CCDC25Q86WR0 208 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 CDC26Q8NHZ8 85 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 TRIM56Q9BRZ2 755 aaKnown RBP5.82□□□□□ -1.48
MATR3-211ENST00000505625 ANKRD2Q9GZV1 360 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 RRAGCQ9HB90 399 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 ST7Q9NRC1 585 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 TBC1D7Q9P0N9 293 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 MUM1L1Q5H9M0 696 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 HS2ST1Q7LGA3 356 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 FILIP1Q7Z7B0 1213 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 PDCL2Q8N4E4 241 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 ALG1Q9BT22 464 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 TTF2Q9UNY4 1162 aaKnown RBP5.82□□□□□ -1.48
MATR3-211ENST00000505625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.82□□□□□ -1.48
MATR3-211ENST00000505625 NPM3O75607 178 aaKnown RBP5.82□□□□□ -1.48
MATR3-211ENST00000505625 PSMD6Q15008 389 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 VMP1Q96GC9 406 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 ECHDC1Q9NTX5 307 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 USP40Q9NVE5 1235 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 MKRN1Q9UHC7 482 aaKnown RBP5.82□□□□□ -1.48
MATR3-211ENST00000505625 FRMD4BQ9Y2L6 1034 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 BIN1O00499 593 aa5.82□□□□□ -1.48
MATR3-211ENST00000505625 TBCCQ15814 346 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms