RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 ITGBL1O95965 494 aaPredicted RBP15.09■□□□□ 0.01
SNCA-208ENST00000505199 DIXDC1Q155Q3 683 aa15.09■□□□□ 0.01
SNCA-208ENST00000505199 RBM26Q5T8P6 1007 aaKnown RBP15.09■□□□□ 0.01
SNCA-208ENST00000505199 SLC9C2Q5TAH2 1124 aa15.09■□□□□ 0.01
SNCA-208ENST00000505199 ANGEL2Q5VTE6 544 aaKnown RBP15.09■□□□□ 0.01
SNCA-208ENST00000505199 ZNF384Q8TF68 577 aa15.09■□□□□ 0.01
SNCA-208ENST00000505199 ANTXR1Q9H6X2 564 aa15.09■□□□□ 0.01
SNCA-208ENST00000505199 TAOK2Q9UL54 1235 aa15.09■□□□□ 0.01
SNCA-208ENST00000505199 COL2A1P02458 1487 aaPredicted RBP15.08■□□□□ 0.01
SNCA-208ENST00000505199 MYO5AQ9Y4I1 1855 aaKnown RBP15.08■□□□□ 0.01
SNCA-208ENST00000505199 PDE6AP16499 860 aa15.08■□□□□ 0
SNCA-208ENST00000505199 KRT26Q7Z3Y9 468 aa15.08■□□□□ 0
SNCA-208ENST00000505199 HOOK2Q96ED9 719 aa15.08■□□□□ 0
SNCA-208ENST00000505199 PASKQ96RG2 1323 aa15.08■□□□□ 0
SNCA-208ENST00000505199 ENTPD3O75355 529 aa15.07■□□□□ 0
SNCA-208ENST00000505199 POTEIP0CG38 1075 aa15.07■□□□□ 0
SNCA-208ENST00000505199 POTEJP0CG39 1038 aa15.07■□□□□ 0
SNCA-208ENST00000505199 ADD2P35612 726 aa15.07■□□□□ 0
SNCA-208ENST00000505199 FKBP1BP68106 108 aa15.07■□□□□ 0
SNCA-208ENST00000505199 MAGEB6Q8N7X4 407 aa15.07■□□□□ 0
SNCA-208ENST00000505199 ZNF70Q9UC06 446 aaPredicted RBP15.07■□□□□ 0
SNCA-208ENST00000505199 POLR2AP24928 1970 aaKnown RBP15.06■□□□□ 0
SNCA-208ENST00000505199 TCRBV5S4A2TA0A5A2 114 aa15.06■□□□□ 0
SNCA-208ENST00000505199 UNCXA6NJT0 531 aa15.06■□□□□ 0
SNCA-208ENST00000505199 HIP1O00291 1037 aa15.06■□□□□ 0
SNCA-208ENST00000505199 BTDP43251 543 aa15.06■□□□□ 0
SNCA-208ENST00000505199 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
SNCA-208ENST00000505199 CDC42EP5Q6NZY7 148 aa15.06■□□□□ 0
SNCA-208ENST00000505199 TDRD3Q9H7E2 651 aaKnown RBP15.06■□□□□ 0
SNCA-208ENST00000505199 CYP7A1P22680 504 aa15.05■□□□□ -0
SNCA-208ENST00000505199 PDE4AP27815 886 aa15.05■□□□□ -0
SNCA-208ENST00000505199 RHBDL3P58872 404 aa15.05■□□□□ -0
SNCA-208ENST00000505199 SUPT20HL1Q3ZLR7 823 aa15.05■□□□□ -0
SNCA-208ENST00000505199 TSHZ3Q63HK5 1081 aa15.05■□□□□ -0
SNCA-208ENST00000505199 APPBP2Q92624 585 aa15.05■□□□□ -0
SNCA-208ENST00000505199 BCL11AQ9H165 835 aa15.05■□□□□ -0
SNCA-208ENST00000505199 DEFB129Q9H1M3 183 aa15.05■□□□□ -0
SNCA-208ENST00000505199 USP40Q9NVE5 1235 aa15.05■□□□□ -0
SNCA-208ENST00000505199 NDUFB9Q9Y6M9 179 aa15.05■□□□□ -0
SNCA-208ENST00000505199 ZNF532Q9HCE3 1301 aa15.05■□□□□ -0
SNCA-208ENST00000505199 FOCADQ5VW36 1801 aa15.05■□□□□ -0
SNCA-208ENST00000505199 TRPM7Q96QT4 1865 aa15.05■□□□□ -0
SNCA-208ENST00000505199 ATRNL1Q5VV63 1379 aa15.04■□□□□ -0
SNCA-208ENST00000505199 RNF113AO15541 343 aaKnown RBP15.04■□□□□ -0
SNCA-208ENST00000505199 NF2P35240 595 aa15.04■□□□□ -0
SNCA-208ENST00000505199 C1QTNF8P60827 252 aa15.04■□□□□ -0
SNCA-208ENST00000505199 TTC22Q5TAA0 569 aa15.04■□□□□ -0
SNCA-208ENST00000505199 FAM151AQ8WW52 585 aa15.04■□□□□ -0
SNCA-208ENST00000505199 RIOK1Q9BRS2 568 aaKnown RBP15.04■□□□□ -0
SNCA-208ENST00000505199 DHX36Q9H2U1 1008 aaKnown RBP15.04■□□□□ -0
SNCA-208ENST00000505199 WDHD1O75717 1129 aaPredicted RBP15.03■□□□□ -0
SNCA-208ENST00000505199 GNAT2P19087 354 aa15.03■□□□□ -0
SNCA-208ENST00000505199 ADGRA1Q86SQ6 560 aa15.03■□□□□ -0
SNCA-208ENST00000505199 EDC3Q96F86 508 aaKnown RBP15.03■□□□□ -0
SNCA-208ENST00000505199 HHIPL1Q96JK4 782 aa15.03■□□□□ -0
SNCA-208ENST00000505199 FSD1Q9BTV5 496 aa15.03■□□□□ -0
SNCA-208ENST00000505199 VEZTQ9HBM0 779 aa15.03■□□□□ -0
SNCA-208ENST00000505199 AK9Q5TCS8 1911 aa15.03■□□□□ -0
SNCA-208ENST00000505199 ASTN2O75129 1339 aaPredicted RBP15.02■□□□□ -0
SNCA-208ENST00000505199 MAGEB6P1A0A0J9YX57 407 aa15.02■□□□□ -0
SNCA-208ENST00000505199 CLRN2A0PK11 232 aa15.02■□□□□ -0
SNCA-208ENST00000505199 APLP1P51693 650 aa15.02■□□□□ -0
SNCA-208ENST00000505199 RASA3Q14644 834 aa15.02■□□□□ -0
SNCA-208ENST00000505199 BMP2KLQ5H9B9 411 aa15.02■□□□□ -0
SNCA-208ENST00000505199 GIMAP6Q6P9H5 292 aa15.02■□□□□ -0
SNCA-208ENST00000505199 GLIS2Q9BZE0 524 aaPredicted RBP15.02■□□□□ -0
SNCA-208ENST00000505199 CRNKL1Q9BZJ0 848 aaKnown RBP15.02■□□□□ -0
SNCA-208ENST00000505199 HELLSQ9NRZ9 838 aa15.02■□□□□ -0
SNCA-208ENST00000505199 AATFQ9NY61 560 aaKnown RBP eCLIP15.02■□□□□ -0
SNCA-208ENST00000505199 PCDHAC2Q9Y5I4 1007 aa15.02■□□□□ -0
SNCA-208ENST00000505199 CNTNAP1P78357 1384 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 TRIM6-TRIM34B2RNG4 842 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 MAP3K11Q16584 847 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 ZMYM1Q5SVZ6 1142 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 USP48Q86UV5 1035 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 AIDAQ96BJ3 306 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 ATP8A2Q9NTI2 1148 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 PAPPA2Q9BXP8 1791 aa15.01□□□□□ -0.01
SNCA-208ENST00000505199 CDK5RAP2Q96SN8 1893 aa15□□□□□ -0.01
SNCA-208ENST00000505199 TMEM88BA6NKF7 163 aa15□□□□□ -0.01
SNCA-208ENST00000505199 MFAP1P55081 439 aaKnown RBP15□□□□□ -0.01
SNCA-208ENST00000505199 MAP3K10Q02779 954 aa15□□□□□ -0.01
SNCA-208ENST00000505199 TEX11Q8IYF3 940 aa15□□□□□ -0.01
SNCA-208ENST00000505199 CDCA5Q96FF9 252 aa15□□□□□ -0.01
SNCA-208ENST00000505199 TEPSINQ96N21 525 aa15□□□□□ -0.01
SNCA-208ENST00000505199 FAM198AQ9UFP1 575 aa15□□□□□ -0.01
SNCA-208ENST00000505199 TCP10L2B9ZVM9 353 aa14.99□□□□□ -0.01
SNCA-208ENST00000505199 ADM5C9JUS6 153 aa14.99□□□□□ -0.01
SNCA-208ENST00000505199 PPP1R12BO60237 982 aaPredicted RBP14.99□□□□□ -0.01
SNCA-208ENST00000505199 TBC1D12O60347 775 aa14.99□□□□□ -0.01
SNCA-208ENST00000505199 HSPA6P17066 643 aa14.99□□□□□ -0.01
SNCA-208ENST00000505199 RGS3P49796 1198 aa14.99□□□□□ -0.01
SNCA-208ENST00000505199 NFIAQ12857 509 aa14.99□□□□□ -0.01
SNCA-208ENST00000505199 DCAF15Q66K64 600 aa14.99□□□□□ -0.01
SNCA-208ENST00000505199 SH3RF3Q8TEJ3 882 aaPredicted RBP14.99□□□□□ -0.01
SNCA-208ENST00000505199 DDRGK1Q96HY6 314 aa14.99□□□□□ -0.01
SNCA-208ENST00000505199 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
SNCA-208ENST00000505199 MKRN1Q9UHC7 482 aaKnown RBP14.99□□□□□ -0.01
SNCA-208ENST00000505199 FLT1P17948 1338 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms