RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 MAP1SQ66K74 1059 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC13-206ENST00000504751 FBXL19Q6PCT2 694 aa8.95□□□□□ -0.98
TRAPPC13-206ENST00000504751 KIAA0825Q8IV33 1275 aa8.95□□□□□ -0.98
TRAPPC13-206ENST00000504751 KRT82Q9NSB4 513 aa8.95□□□□□ -0.98
TRAPPC13-206ENST00000504751 TRIM37O94972 964 aa8.94□□□□□ -0.98
TRAPPC13-206ENST00000504751 PRRT3Q5FWE3 981 aa8.94□□□□□ -0.98
TRAPPC13-206ENST00000504751 CCDC84Q86UT8 332 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC13-206ENST00000504751 ZNF296Q8WUU4 475 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC13-206ENST00000504751 SCARF2Q96GP6 870 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC13-206ENST00000504751 SPON2Q9BUD6 331 aa8.94□□□□□ -0.98
TRAPPC13-206ENST00000504751 ZC3H12CQ9C0D7 883 aaKnown RBP8.94□□□□□ -0.98
TRAPPC13-206ENST00000504751 MIR1-1HGQ9H1L0 117 aa8.94□□□□□ -0.98
TRAPPC13-206ENST00000504751 ZNF862O60290 1169 aa8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 GREM1O60565 184 aa8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 GJA8P48165 433 aa8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 PTPN11Q06124 597 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 SNAP47Q5SQN1 464 aa8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 BNC2Q6ZN30 1099 aaPredicted RBP8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 GOLM1Q8NBJ4 401 aa8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 KCNB2Q92953 911 aa8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 SUPT16HQ9Y5B9 1047 aaKnown RBP8.93□□□□□ -0.98
TRAPPC13-206ENST00000504751 F13A1P00488 732 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 SPATA31C1P0DKV0 1188 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 SELPP16109 830 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 LMNB1P20700 586 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 PAK2Q13177 524 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 DUOXA2Q1HG44 320 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 NAALADL2Q58DX5 795 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 IGF2-ASQ6U949 168 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 FAM196AQ6ZSG2 479 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 KIAA1211Q6ZU35 1233 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 GPBAR1Q8TDU6 330 aa8.92□□□□□ -0.98
TRAPPC13-206ENST00000504751 FAM221AA4D161 298 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 CRKP46108 304 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 PDE3AQ14432 1141 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 GRIK4Q16099 956 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 SHISA2Q6UWI4 295 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 ACAD11Q709F0 780 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 WDR89Q96FK6 387 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 EAF1Q96JC9 268 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 TMPRSS13Q9BYE2 586 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 MRPL18Q9H0U6 180 aaKnown RBP8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 CAPN10Q9HC96 672 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 INPP5FQ9Y2H2 1132 aa8.91□□□□□ -0.98
TRAPPC13-206ENST00000504751 KIF4BQ2VIQ3 1234 aa8.9□□□□□ -0.98
TRAPPC13-206ENST00000504751 HP1BP3Q5SSJ5 553 aaPredicted RBP8.9□□□□□ -0.98
TRAPPC13-206ENST00000504751 GATAD2BQ8WXI9 593 aa8.9□□□□□ -0.98
TRAPPC13-206ENST00000504751 GPRASP2Q96D09 838 aa8.9□□□□□ -0.98
TRAPPC13-206ENST00000504751 WDR18Q9BV38 432 aa8.9□□□□□ -0.98
TRAPPC13-206ENST00000504751 NT5C1AQ9BXI3 368 aa8.9□□□□□ -0.98
TRAPPC13-206ENST00000504751 LRRC3Q9BY71 257 aa8.9□□□□□ -0.98
TRAPPC13-206ENST00000504751 PCDHGC5Q9Y5F6 944 aa8.9□□□□□ -0.98
TRAPPC13-206ENST00000504751 CILPO75339 1184 aa8.89□□□□□ -0.99
TRAPPC13-206ENST00000504751 LIG1P18858 919 aa8.89□□□□□ -0.99
TRAPPC13-206ENST00000504751 FBXO27Q8NI29 283 aa8.89□□□□□ -0.99
TRAPPC13-206ENST00000504751 RASGRP4Q8TDF6 673 aa8.89□□□□□ -0.99
TRAPPC13-206ENST00000504751 JARID2Q92833 1246 aaPredicted RBP8.89□□□□□ -0.99
TRAPPC13-206ENST00000504751 UBP1Q9NZI7 540 aa8.89□□□□□ -0.99
TRAPPC13-206ENST00000504751 MEGF11A6BM72 1044 aa8.88□□□□□ -0.99
TRAPPC13-206ENST00000504751 SLC43A3Q8NBI5 491 aa8.88□□□□□ -0.99
TRAPPC13-206ENST00000504751 LENG1Q96BZ8 264 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC13-206ENST00000504751 ACSBG1Q96GR2 724 aa8.88□□□□□ -0.99
TRAPPC13-206ENST00000504751 RUSC1Q9BVN2 902 aa8.88□□□□□ -0.99
TRAPPC13-206ENST00000504751 RNF208Q9H0X6 261 aa8.88□□□□□ -0.99
TRAPPC13-206ENST00000504751 SYNGAP1Q96PV0 1343 aa8.87□□□□□ -0.99
TRAPPC13-206ENST00000504751 F8W735 103 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC13-206ENST00000504751 AOC2O75106 756 aa8.87□□□□□ -0.99
TRAPPC13-206ENST00000504751 CDK8P49336 464 aa8.87□□□□□ -0.99
TRAPPC13-206ENST00000504751 EXOSC6Q5RKV6 272 aaKnown RBP8.87□□□□□ -0.99
TRAPPC13-206ENST00000504751 TMEM130Q8N3G9 435 aa8.87□□□□□ -0.99
TRAPPC13-206ENST00000504751 SUGCTQ9HAC7 445 aa8.87□□□□□ -0.99
TRAPPC13-206ENST00000504751 PCDHA4Q9UN74 947 aa8.87□□□□□ -0.99
TRAPPC13-206ENST00000504751 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 FAM181BA6NEQ2 426 aa8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 RPL6Q02878 288 aaKnown RBP8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 APOBRQ0VD83 1088 aa8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 GNL2Q13823 731 aaKnown RBP8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 MPP2Q14168 576 aa8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 Q6ZS46 218 aa8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 ALYREFQ86V81 257 aaKnown RBP8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 AGGF1Q8N302 714 aaeCLIP8.86□□□□□ -0.99
TRAPPC13-206ENST00000504751 TLR3O15455 904 aaKnown RBP8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 INPP5AQ14642 412 aa8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 ZC3H12AQ5D1E8 599 aaKnown RBP8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 WIPI1Q5MNZ9 446 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 LRFN4Q6PJG9 635 aa8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 REC114Q7Z4M0 266 aa8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 SMG8Q8ND04 991 aaKnown RBP8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 PLPPR2Q96GM1 343 aa8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 STK17AQ9UEE5 414 aa8.85□□□□□ -0.99
TRAPPC13-206ENST00000504751 GFRA2O00451 464 aa8.84□□□□□ -0.99
TRAPPC13-206ENST00000504751 TIAF1O95411 115 aa8.84□□□□□ -0.99
TRAPPC13-206ENST00000504751 BPNT1O95861 308 aa8.84□□□□□ -0.99
TRAPPC13-206ENST00000504751 ADH5P11766 374 aa8.84□□□□□ -0.99
TRAPPC13-206ENST00000504751 NUTM2GQ5VZR2 741 aa8.84□□□□□ -0.99
TRAPPC13-206ENST00000504751 SLITRK4Q8IW52 837 aa8.84□□□□□ -0.99
TRAPPC13-206ENST00000504751 SPATA32Q96LK8 384 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms