RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 OSBPL3Q9H4L5 887 aa13.5□□□□□ -0.25
VCAN-205ENST00000503923 VEZTQ9HBM0 779 aa13.5□□□□□ -0.25
VCAN-205ENST00000503923 PPP4R2Q9NY27 417 aa13.5□□□□□ -0.25
VCAN-205ENST00000503923 PASKQ96RG2 1323 aa13.49□□□□□ -0.25
VCAN-205ENST00000503923 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
VCAN-205ENST00000503923 BAG3O95817 575 aa13.49□□□□□ -0.25
VCAN-205ENST00000503923 CYP7A1P22680 504 aa13.49□□□□□ -0.25
VCAN-205ENST00000503923 BTDP43251 543 aa13.49□□□□□ -0.25
VCAN-205ENST00000503923 TNFAIP1Q13829 316 aa13.49□□□□□ -0.25
VCAN-205ENST00000503923 SLC9C2Q5TAH2 1124 aa13.49□□□□□ -0.25
VCAN-205ENST00000503923 NOL10Q9BSC4 688 aaKnown RBP13.49□□□□□ -0.25
VCAN-205ENST00000503923 USP40Q9NVE5 1235 aa13.49□□□□□ -0.25
VCAN-205ENST00000503923 MAP4K4O95819 1239 aaPredicted RBP13.48□□□□□ -0.25
VCAN-205ENST00000503923 PDE6AP16499 860 aa13.48□□□□□ -0.25
VCAN-205ENST00000503923 PDE4AP27815 886 aa13.48□□□□□ -0.25
VCAN-205ENST00000503923 TNNI2P48788 182 aa13.48□□□□□ -0.25
VCAN-205ENST00000503923 FKBP1CQ5VVH2 108 aa13.48□□□□□ -0.25
VCAN-205ENST00000503923 ZSCAN25Q6NSZ9 544 aa13.48□□□□□ -0.25
VCAN-205ENST00000503923 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
VCAN-205ENST00000503923 KBTBD3Q8NAB2 608 aa13.48□□□□□ -0.25
VCAN-205ENST00000503923 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
VCAN-205ENST00000503923 PPP2R3BQ9Y5P8 575 aa13.48□□□□□ -0.25
VCAN-205ENST00000503923 MYH7P12883 1935 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 TCP10L2B9ZVM9 353 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 TRAF5O00463 557 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 PLCG2P16885 1265 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 ADD2P35612 726 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 PPP4CP60510 307 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 LRRFIP1Q32MZ4 808 aaKnown RBP13.47□□□□□ -0.25
VCAN-205ENST00000503923 ADGRA1Q86SQ6 560 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 CERS3Q8IU89 383 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 DEFB129Q9H1M3 183 aa13.47□□□□□ -0.25
VCAN-205ENST00000503923 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
VCAN-205ENST00000503923 TRPM7Q96QT4 1865 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 TCRBV5S4A2TA0A5A2 114 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 CACNB3P54284 484 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 RHBDL3P58872 404 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 RASA3Q14644 834 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 UBE3CQ15386 1083 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 EVI5LQ96CN4 794 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 CDCA5Q96FF9 252 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 FSD1Q9BTV5 496 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 IDI2Q9BXS1 227 aa13.46□□□□□ -0.25
VCAN-205ENST00000503923 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
VCAN-205ENST00000503923 ZFYP08048 801 aaPredicted RBP13.45□□□□□ -0.26
VCAN-205ENST00000503923 APLP1P51693 650 aa13.45□□□□□ -0.26
VCAN-205ENST00000503923 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.26
VCAN-205ENST00000503923 DLK2Q6UY11 383 aa13.45□□□□□ -0.26
VCAN-205ENST00000503923 RFX7Q2KHR2 1363 aa13.45□□□□□ -0.26
VCAN-205ENST00000503923 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
VCAN-205ENST00000503923 ENTPD3O75355 529 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 NPM3O75607 178 aaKnown RBP13.44□□□□□ -0.26
VCAN-205ENST00000503923 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
VCAN-205ENST00000503923 CELF2O95319 508 aaKnown RBP13.44□□□□□ -0.26
VCAN-205ENST00000503923 HSPA6P17066 643 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 NF2P35240 595 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 NFIAQ12857 509 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 PRAMEF18Q5VWM3 479 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 TICAM2Q86XR7 235 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 TEX11Q8IYF3 940 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 MIGA1Q8NAN2 632 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 SH3RF3Q8TEJ3 882 aaPredicted RBP13.44□□□□□ -0.26
VCAN-205ENST00000503923 FAM151AQ8WW52 585 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 ZNF408Q9H9D4 720 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 CNTNAP1P78357 1384 aa13.44□□□□□ -0.26
VCAN-205ENST00000503923 TMEM88BA6NKF7 163 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 RGS3P49796 1198 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 DYNLL1P63167 89 aaKnown RBP13.43□□□□□ -0.26
VCAN-205ENST00000503923 TCP10Q12799 353 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 SUPT20HL1Q3ZLR7 823 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 CST9Q5W186 159 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 RILPL2Q969X0 211 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 RIOK1Q9BRS2 568 aaKnown RBP13.43□□□□□ -0.26
VCAN-205ENST00000503923 TMEM39BQ9GZU3 492 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 FAM198AQ9UFP1 575 aa13.43□□□□□ -0.26
VCAN-205ENST00000503923 RPAP1Q9BWH6 1393 aaPredicted RBP13.43□□□□□ -0.26
VCAN-205ENST00000503923 PICALMQ13492 652 aa13.42□□□□□ -0.26
VCAN-205ENST00000503923 SLFNL1Q499Z3 407 aa13.42□□□□□ -0.26
VCAN-205ENST00000503923 TGFBRAP1Q8WUH2 860 aa13.42□□□□□ -0.26
VCAN-205ENST00000503923 APPBP2Q92624 585 aa13.42□□□□□ -0.26
VCAN-205ENST00000503923 TEPSINQ96N21 525 aa13.42□□□□□ -0.26
VCAN-205ENST00000503923 DDX4Q9NQI0 724 aaKnown RBP13.42□□□□□ -0.26
VCAN-205ENST00000503923 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
VCAN-205ENST00000503923 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 MBD4O95243 580 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 CHGBP05060 677 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 USP5P45974 858 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 FKBP1BP68106 108 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 NBPF12Q5TAG4 269 aaPredicted RBP13.41□□□□□ -0.26
VCAN-205ENST00000503923 LCORLQ8N3X6 602 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 C2orf69Q8N8R5 385 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 AIDAQ96BJ3 306 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 HOOK2Q96ED9 719 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 CRNKL1Q9BZJ0 848 aaKnown RBP13.41□□□□□ -0.26
VCAN-205ENST00000503923 OSBPL5Q9H0X9 879 aaPredicted RBP13.41□□□□□ -0.26
VCAN-205ENST00000503923 GBA2Q9HCG7 927 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms