RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 CNNM2Q9H8M5 875 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 GJB4Q9NTQ9 266 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 CLIP2Q9UDT6 1046 aa19.26■□□□□ 0.67
VCAN-204ENST00000502527 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
VCAN-204ENST00000502527 LOC102724428A0A0B4J2F2 783 aa19.25■□□□□ 0.67
VCAN-204ENST00000502527 GNAT2P19087 354 aa19.25■□□□□ 0.67
VCAN-204ENST00000502527 LIFRP42702 1097 aa19.25■□□□□ 0.67
VCAN-204ENST00000502527 NDUFA8P51970 172 aa19.25■□□□□ 0.67
VCAN-204ENST00000502527 SIK1P57059 783 aa19.25■□□□□ 0.67
VCAN-204ENST00000502527 TMEM67Q5HYA8 995 aa19.25■□□□□ 0.67
VCAN-204ENST00000502527 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
VCAN-204ENST00000502527 WNK3Q9BYP7 1800 aa19.25■□□□□ 0.67
VCAN-204ENST00000502527 NKX2-3Q8TAU0 364 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 NACAP1Q9BZK3 213 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 KRT23Q9C075 422 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 LY9Q9HBG7 655 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 EPB41L4AQ9HCS5 686 aaPredicted RBP19.24■□□□□ 0.67
VCAN-204ENST00000502527 MICU3Q86XE3 530 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 MRFAP1L1Q96HT8 127 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 ARMT1Q9H993 441 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 C4AP0C0L4 1744 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 C4BP0C0L5 1744 aa19.24■□□□□ 0.67
VCAN-204ENST00000502527 ROBO1Q9Y6N7 1651 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 GOLGA8AA7E2F4 631 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 SNAP23O00161 211 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 NTSR2O95665 410 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 CDC27P30260 824 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
VCAN-204ENST00000502527 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
VCAN-204ENST00000502527 KRT40Q6A162 431 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 ACSBG1Q96GR2 724 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 NIP7Q9Y221 180 aaKnown RBP eCLIP19.23■□□□□ 0.67
VCAN-204ENST00000502527 CMA1P23946 247 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 TRIM29Q14134 588 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 SLC39A14Q15043 492 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 AKNAD1Q5T1N1 836 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 DHX40Q8IX18 779 aaKnown RBP19.23■□□□□ 0.67
VCAN-204ENST00000502527 PDCL3Q9H2J4 239 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 SENP2Q9HC62 589 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 ZSWIM5Q9P217 1185 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 KIAA1468Q9P260 1216 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 NRBP1Q9UHY1 535 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 SLC12A7Q9Y666 1083 aa19.23■□□□□ 0.67
VCAN-204ENST00000502527 PNPLA7Q6ZV29 1317 aa19.22■□□□□ 0.67
VCAN-204ENST00000502527 GSG1L2A8MUP6 293 aa19.22■□□□□ 0.67
VCAN-204ENST00000502527 IFIT3O14879 490 aaKnown RBP19.22■□□□□ 0.67
VCAN-204ENST00000502527 RXRAP19793 462 aa19.22■□□□□ 0.67
VCAN-204ENST00000502527 BCAMP50895 628 aa19.22■□□□□ 0.67
VCAN-204ENST00000502527 CTDSPL2Q05D32 466 aa19.22■□□□□ 0.67
VCAN-204ENST00000502527 GNL2Q13823 731 aaKnown RBP19.22■□□□□ 0.67
VCAN-204ENST00000502527 AXDND1Q5T1B0 1012 aaPredicted RBP19.22■□□□□ 0.67
VCAN-204ENST00000502527 MFSD6Q6ZSS7 791 aa19.22■□□□□ 0.67
VCAN-204ENST00000502527 VPS37DQ86XT2 251 aa19.22■□□□□ 0.67
VCAN-204ENST00000502527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.21■□□□□ 0.67
VCAN-204ENST00000502527 CCDC69A6NI79 296 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 ITPK1Q13572 414 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 NTRK3Q16288 839 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 MARCH10Q8NA82 808 aaPredicted RBP19.21■□□□□ 0.67
VCAN-204ENST00000502527 PHKBQ93100 1093 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 AIFM3Q96NN9 605 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 MYO5AQ9Y4I1 1855 aaKnown RBP19.21■□□□□ 0.67
VCAN-204ENST00000502527 JMYQ8N9B5 988 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 MAP7D2Q96T17 732 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 INCENPQ9NQS7 918 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 ZNF652Q9Y2D9 606 aa19.21■□□□□ 0.67
VCAN-204ENST00000502527 STK36Q9NRP7 1315 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 ZNF202O95125 648 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 TDO2P48775 406 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 RBM10P98175 930 aaKnown RBP19.2■□□□□ 0.66
VCAN-204ENST00000502527 CHRNDQ07001 517 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 CHAF1AQ13111 956 aaPredicted RBP19.2■□□□□ 0.66
VCAN-204ENST00000502527 CCDC144CPQ8IYA2 1237 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 FAM217BQ9NTX9 383 aaPredicted RBP19.2■□□□□ 0.66
VCAN-204ENST00000502527 FAM13BQ9NYF5 915 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 LRP2BPQ9P2M1 347 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 SLC4A4Q9Y6R1 1079 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 PPP6R2O75170 966 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 SLC3A2P08195 630 aaKnown RBP19.2■□□□□ 0.66
VCAN-204ENST00000502527 SSRP1Q08945 709 aaKnown RBP19.2■□□□□ 0.66
VCAN-204ENST00000502527 LRMPQ12912 555 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 SART3Q15020 963 aaKnown RBP19.2■□□□□ 0.66
VCAN-204ENST00000502527 LCORLQ8N3X6 602 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 STAG1Q8WVM7 1258 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 WASF1Q92558 559 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
VCAN-204ENST00000502527 BPIFA3Q9BQP9 254 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 MTA3Q9BTC8 594 aa19.2■□□□□ 0.66
VCAN-204ENST00000502527 DOCK2Q92608 1830 aa19.19■□□□□ 0.66
VCAN-204ENST00000502527 RREB1Q92766 1687 aa19.19■□□□□ 0.66
VCAN-204ENST00000502527 RANBP6O60518 1105 aaKnown RBP19.19■□□□□ 0.66
VCAN-204ENST00000502527 NEMFO60524 1076 aa19.19■□□□□ 0.66
VCAN-204ENST00000502527 PFKFB1P16118 471 aa19.19■□□□□ 0.66
VCAN-204ENST00000502527 U2AF2P26368 475 aaKnown RBP eCLIP19.19■□□□□ 0.66
VCAN-204ENST00000502527 GTF2F1P35269 517 aaKnown RBP eCLIP19.19■□□□□ 0.66
VCAN-204ENST00000502527 AOPEPQ8N6M6 819 aa19.19■□□□□ 0.66
VCAN-204ENST00000502527 ERCC4Q92889 916 aaPredicted RBP19.19■□□□□ 0.66
VCAN-204ENST00000502527 SMARCC1Q92922 1105 aaPredicted RBP19.19■□□□□ 0.66
VCAN-204ENST00000502527 NID2Q14112 1375 aa19.18■□□□□ 0.66
VCAN-204ENST00000502527 A0A087WWV3 80 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms