RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 FAM95CA0A1B0GW59 222 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 PRPF40AO75400 957 aaKnown RBP4.45□□□□□ -1.7
SMAD1-203ENST00000502342 NFICP08651 508 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 SLFN14P0C7P3 912 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 ADH5P11766 374 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 RAB6AP20340 208 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 BMP6P22004 513 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 EIF4BP23588 611 aaKnown RBP4.45□□□□□ -1.7
SMAD1-203ENST00000502342 FGD1P98174 961 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 UVSSAQ2YD98 709 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.45□□□□□ -1.7
SMAD1-203ENST00000502342 NPAS4Q8IUM7 802 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 SULF2Q8IWU5 870 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 MFSD14AQ96MC6 490 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 FRMD6Q96NE9 622 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 NECAB3Q96P71 396 aaPredicted RBP4.45□□□□□ -1.7
SMAD1-203ENST00000502342 WDR18Q9BV38 432 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 ACTL7BQ9Y614 415 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 AK5Q9Y6K8 562 aa4.45□□□□□ -1.7
SMAD1-203ENST00000502342 WDR64B1ANS9 1081 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 RNGTTO60942 597 aaKnown RBP4.44□□□□□ -1.7
SMAD1-203ENST00000502342 NME2P22392 152 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 GNA15P30679 374 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 SSTR4P31391 388 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 XPCQ01831 940 aaPredicted RBP4.44□□□□□ -1.7
SMAD1-203ENST00000502342 NFIAQ12857 509 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 MAP3K11Q16584 847 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 RASIP1Q5U651 963 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 RNF43Q68DV7 783 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 PDZD3Q86UT5 571 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 CEP44Q9C0F1 390 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 SRCIN1Q9C0H9 1055 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 FAM105AQ9NUU6 356 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 FAM8A1Q9UBU6 413 aa4.44□□□□□ -1.7
SMAD1-203ENST00000502342 TTF2Q9UNY4 1162 aaKnown RBP4.44□□□□□ -1.7
SMAD1-203ENST00000502342 ENC1O14682 589 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 TGFB1P01137 390 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 CELA3AP09093 270 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 ADMP35318 185 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 HNRNPUQ00839 825 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMAD1-203ENST00000502342 PSMD2Q13200 908 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 COL19A1Q14993 1142 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 PAOXQ6QHF9 649 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 Q8N3U1 123 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 SHKBP1Q8TBC3 707 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 GPBAR1Q8TDU6 330 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 ACSBG1Q96GR2 724 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 EMILIN2Q9BXX0 1053 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 DAGLAQ9Y4D2 1042 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 SAMM50Q9Y512 469 aa4.43□□□□□ -1.7
SMAD1-203ENST00000502342 DCDC2CA8MYV0 355 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 TMPRSS2O15393 492 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 DYNC1LI2O43237 492 aaPredicted RBP4.42□□□□□ -1.7
SMAD1-203ENST00000502342 HYAL3O43820 417 aaPredicted RBP4.42□□□□□ -1.7
SMAD1-203ENST00000502342 MED26O95402 600 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 F13BP05160 661 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 MEI1Q5TIA1 1274 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 C12orf40Q86WS4 652 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 TBC1D32Q96NH3 1257 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 FANCD2OSQ96PS1 177 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 YIPF2Q9BWQ6 316 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 SSU72Q9NP77 194 aaKnown RBP4.42□□□□□ -1.7
SMAD1-203ENST00000502342 DISC1Q9NRI5 854 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 CRIM1Q9NZV1 1036 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 HIF3AQ9Y2N7 669 aa4.42□□□□□ -1.7
SMAD1-203ENST00000502342 GSC2O15499 205 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 HCLS1P14317 486 aaPredicted RBP4.41□□□□□ -1.7
SMAD1-203ENST00000502342 DAB2P98082 770 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 ID3Q02535 119 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 PTPN11Q06124 597 aaPredicted RBP4.41□□□□□ -1.7
SMAD1-203ENST00000502342 TTLL4Q14679 1199 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 CCDC85BQ15834 202 aaPredicted RBP4.41□□□□□ -1.7
SMAD1-203ENST00000502342 KIF4BQ2VIQ3 1234 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 FBXO33Q7Z6M2 555 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 SLC51AQ86UW1 340 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 ZDHHC13Q8IUH4 622 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 DBNDD2Q9BQY9 259 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 SEMA6CQ9H3T2 930 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 ACSS3Q9H6R3 686 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 PIDD1Q9HB75 910 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 KRT82Q9NSB4 513 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 ATG3Q9NT62 314 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 PPM1HQ9ULR3 514 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 RNF112Q9ULX5 631 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 PCDHA4Q9UN74 947 aa4.41□□□□□ -1.7
SMAD1-203ENST00000502342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.4□□□□□ -1.71
SMAD1-203ENST00000502342 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 PRR19A6NJB7 356 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 FAM170BA6NMN3 283 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 F6X3S4 739 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 ERCC3P19447 782 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 HOXA10P31260 410 aaPredicted RBP4.4□□□□□ -1.71
SMAD1-203ENST00000502342 ZNF252P-AS1Q0IIN9 211 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 TRIM26Q12899 539 aaPredicted RBP4.4□□□□□ -1.71
SMAD1-203ENST00000502342 MAP7Q14244 749 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 LRRC14Q15048 493 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 PPM1JQ5JR12 505 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 TMCO4Q5TGY1 634 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 PCNX4Q63HM2 1172 aa4.4□□□□□ -1.71
SMAD1-203ENST00000502342 TTBK2Q6IQ55 1244 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms