RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 BMP3P12645 472 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 LIG1P18858 919 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 ZNF326Q5BKZ1 582 aaKnown RBP8.51□□□□□ -1.05
SNX13-211ENST00000496855 AKAP4Q5JQC9 854 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 SV2BQ7L1I2 683 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 C2CD4AQ8NCU7 369 aaPredicted RBP8.51□□□□□ -1.05
SNX13-211ENST00000496855 KCNB2Q92953 911 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 SYNGAP1Q96PV0 1343 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 ZNF862O60290 1169 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 BMP6P22004 513 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 ITGB7P26010 798 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 HNRNPUQ00839 825 aaKnown RBP eCLIP8.51□□□□□ -1.05
SNX13-211ENST00000496855 ZNF252P-AS1Q0IIN9 211 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 WDR89Q96FK6 387 aaPredicted RBP8.51□□□□□ -1.05
SNX13-211ENST00000496855 CBX8Q9HC52 389 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 MRS2Q9HD23 443 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 STOML1Q9UBI4 398 aa8.51□□□□□ -1.05
SNX13-211ENST00000496855 CTSHP09668 335 aa8.5□□□□□ -1.05
SNX13-211ENST00000496855 PRSS36Q5K4E3 855 aa8.5□□□□□ -1.05
SNX13-211ENST00000496855 MEI1Q5TIA1 1274 aa8.5□□□□□ -1.05
SNX13-211ENST00000496855 MAP1SQ66K74 1059 aaPredicted RBP8.5□□□□□ -1.05
SNX13-211ENST00000496855 ITGAEP38570 1179 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 CCDC85BQ15834 202 aaPredicted RBP8.49□□□□□ -1.05
SNX13-211ENST00000496855 KIF4BQ2VIQ3 1234 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 SGO2Q562F6 1265 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 GRIN3AQ8TCU5 1115 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 KCNF1Q9H3M0 494 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 VTI1BQ9UEU0 232 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 AP4E1Q9UPM8 1137 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 ACTL7BQ9Y614 415 aa8.49□□□□□ -1.05
SNX13-211ENST00000496855 SLFN14P0C7P3 912 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 MAP4P27816 1152 aaKnown RBP8.48□□□□□ -1.05
SNX13-211ENST00000496855 USP11P51784 963 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 LRRC14Q15048 493 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 PCNX4Q63HM2 1172 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 BEND4Q6ZU67 534 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 CRELD1Q96HD1 420 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 FAM83CQ9BQN1 747 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 C7orf69Q9H7B7 122 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 CACNA2D2Q9NY47 1150 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 PPP1R9AQ9ULJ8 1098 aa8.48□□□□□ -1.05
SNX13-211ENST00000496855 ST13P50502 369 aaKnown RBP8.47□□□□□ -1.05
SNX13-211ENST00000496855 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
SNX13-211ENST00000496855 RASIP1Q5U651 963 aa8.47□□□□□ -1.05
SNX13-211ENST00000496855 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
SNX13-211ENST00000496855 LLGL2Q6P1M3 1020 aa8.47□□□□□ -1.05
SNX13-211ENST00000496855 TRIM42Q8IWZ5 723 aa8.47□□□□□ -1.05
SNX13-211ENST00000496855 GSX1Q9H4S2 264 aaPredicted RBP8.47□□□□□ -1.05
SNX13-211ENST00000496855 CYP8B1Q9UNU6 501 aa8.47□□□□□ -1.05
SNX13-211ENST00000496855 PCDHGC5Q9Y5F6 944 aa8.47□□□□□ -1.05
SNX13-211ENST00000496855 USP31Q70CQ4 1352 aa8.46□□□□□ -1.05
SNX13-211ENST00000496855 HMX2A2RU54 273 aa8.46□□□□□ -1.05
SNX13-211ENST00000496855 TMPRSS2O15393 492 aa8.46□□□□□ -1.05
SNX13-211ENST00000496855 ZNF16P17020 682 aaPredicted RBP8.46□□□□□ -1.05
SNX13-211ENST00000496855 FSTP19883 344 aa8.46□□□□□ -1.05
SNX13-211ENST00000496855 MPRIPQ6WCQ1 1025 aa8.46□□□□□ -1.05
SNX13-211ENST00000496855 GPBAR1Q8TDU6 330 aa8.46□□□□□ -1.05
SNX13-211ENST00000496855 CRIM1Q9NZV1 1036 aa8.46□□□□□ -1.05
SNX13-211ENST00000496855 TRIM37O94972 964 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 RXRBP28702 533 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 ASPAP45381 313 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 ID3Q02535 119 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 SCARA3Q6AZY7 606 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 TTBK2Q6IQ55 1244 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 FBLIM1Q8WUP2 373 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 YIPF2Q9BWQ6 316 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 FAM105AQ9NUU6 356 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.45□□□□□ -1.06
SNX13-211ENST00000496855 SLC51AQ86UW1 340 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 EZH1Q92800 747 aaPredicted RBP8.45□□□□□ -1.06
SNX13-211ENST00000496855 ACSBG1Q96GR2 724 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 NOC4LQ9BVI4 516 aaKnown RBP8.45□□□□□ -1.06
SNX13-211ENST00000496855 BCL11AQ9H165 835 aa8.45□□□□□ -1.06
SNX13-211ENST00000496855 FAM95CA0A1B0GW59 222 aa8.44□□□□□ -1.06
SNX13-211ENST00000496855 GSC2O15499 205 aa8.44□□□□□ -1.06
SNX13-211ENST00000496855 MRPL58Q14197 206 aaKnown RBP8.44□□□□□ -1.06
SNX13-211ENST00000496855 RNF43Q68DV7 783 aa8.44□□□□□ -1.06
SNX13-211ENST00000496855 FANCD2OSQ96PS1 177 aa8.44□□□□□ -1.06
SNX13-211ENST00000496855 ATXN3LQ9H3M9 355 aa8.44□□□□□ -1.06
SNX13-211ENST00000496855 ACSS3Q9H6R3 686 aa8.44□□□□□ -1.06
SNX13-211ENST00000496855 IGLV1-40P01703 118 aa8.43□□□□□ -1.06
SNX13-211ENST00000496855 RAB6AP20340 208 aa8.43□□□□□ -1.06
SNX13-211ENST00000496855 RPS26P62854 115 aaKnown RBP8.43□□□□□ -1.06
SNX13-211ENST00000496855 NFIAQ12857 509 aa8.43□□□□□ -1.06
SNX13-211ENST00000496855 ZC3H12AQ5D1E8 599 aaKnown RBP8.43□□□□□ -1.06
SNX13-211ENST00000496855 DISC1Q9NRI5 854 aa8.43□□□□□ -1.06
SNX13-211ENST00000496855 RBM47A0AV96 593 aaKnown RBP8.42□□□□□ -1.06
SNX13-211ENST00000496855 RLBP1P12271 317 aa8.42□□□□□ -1.06
SNX13-211ENST00000496855 LIG3P49916 1009 aa8.42□□□□□ -1.06
SNX13-211ENST00000496855 NFKBIBQ15653 356 aa8.42□□□□□ -1.06
SNX13-211ENST00000496855 MAP3K11Q16584 847 aa8.42□□□□□ -1.06
SNX13-211ENST00000496855 PAOXQ6QHF9 649 aa8.42□□□□□ -1.06
SNX13-211ENST00000496855 SEMA6CQ9H3T2 930 aa8.42□□□□□ -1.06
SNX13-211ENST00000496855 NFICP08651 508 aa8.41□□□□□ -1.06
SNX13-211ENST00000496855 AGMOQ6ZNB7 445 aa8.41□□□□□ -1.06
SNX13-211ENST00000496855 ERVK-24P63145 666 aa8.4□□□□□ -1.06
SNX13-211ENST00000496855 MAP7Q14244 749 aa8.4□□□□□ -1.06
SNX13-211ENST00000496855 GAL3ST3Q96A11 431 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms