RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 ZNRF3Q9ULT6 936 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 ATP6V0A2Q9Y487 856 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 COL4A5P29400 1685 aa7.47□□□□□ -1.21
CACNA1C-229ENST00000496818 KDM3BQ7LBC6 1761 aa7.46□□□□□ -1.21
CACNA1C-229ENST00000496818 CARNS1A5YM72 827 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 CELF2O95319 508 aaKnown RBP7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 EIF2S2P20042 333 aaKnown RBP7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 RAB15P59190 212 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 SKOR1P84550 965 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 KIAA2012Q0VF49 1180 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 TNIP1Q15025 636 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 CIAPIN1Q6FI81 312 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 DDX46Q7L014 1031 aaKnown RBP7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 TMC4Q7Z404 712 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 GPR101Q96P66 508 aaPredicted RBP7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 ZNF408Q9H9D4 720 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 SH3TC1Q8TE82 1336 aa7.46□□□□□ -1.22
CACNA1C-229ENST00000496818 LTBP1Q14766 1721 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 CCER2I3L3R5 266 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 TRAF5O00463 557 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 BBOX1O75936 387 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 MAP2K2P36507 400 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 GMPSP49915 693 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 GRAPQ13588 217 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 MPNDQ8N594 471 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 GRAPLQ8TC17 118 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 HHIPL1Q96JK4 782 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 PLEKHF1Q96S99 279 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 RTFDC1Q9BY42 306 aaPredicted RBP7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 BABAM1Q9NWV8 329 aa7.45□□□□□ -1.22
CACNA1C-229ENST00000496818 USP17L3A6NCW0 530 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 USP17L4A6NCW7 530 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 CCDC85CA6NKD9 419 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 USP17L5A8MUK1 530 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 H7C1D1 291 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 CXCL9Q07325 125 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 NOGQ13253 232 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 ARID5BQ14865 1188 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 USP17L2Q6R6M4 530 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 LIAT1Q6ZQX7 453 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 CDC37L1Q7L3B6 337 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 USP17L1Q7RTZ2 530 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 SAPCD2Q86UD0 394 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 PHTF2Q8N3S3 785 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 SLC10A4Q96EP9 437 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 VRTNQ9H8Y1 702 aa7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 TRMT112Q9UI30 125 aaKnown RBP7.44□□□□□ -1.22
CACNA1C-229ENST00000496818 RAD17O75943 681 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 RIPK4P57078 832 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 MCCD1P59942 119 aaPredicted RBP7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 MLLT1Q03111 559 aaPredicted RBP7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 AIMP1Q12904 312 aaKnown RBP7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 NCOA4Q13772 614 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 SLC10A5Q5PT55 438 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 CST9Q5W186 159 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 NLRP10Q86W26 655 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 SP8Q8IXZ3 490 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 PLPP7Q8NBV4 271 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 XAGE3Q8WTP9 111 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 EYA3Q99504 573 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 GLIS2Q9BZE0 524 aaPredicted RBP7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 CCDC88AQ3V6T2 1871 aa7.43□□□□□ -1.22
CACNA1C-229ENST00000496818 AOC2O75106 756 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 CD2BP2O95400 341 aaKnown RBP7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 ANXA1P04083 346 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 HOXB7P09629 217 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 HCLS1P14317 486 aaPredicted RBP7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 HSP90B1P14625 803 aaKnown RBP7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 RPS12P25398 132 aaKnown RBP7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 HUNKP57058 714 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 FMR1Q06787 632 aaKnown RBP eCLIP7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 DDX10Q13206 875 aaKnown RBP7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 TCIRG1Q13488 830 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 PROSER3Q2NL68 480 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 COPS6Q7L5N1 327 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 LRP10Q7Z4F1 713 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 SLC51AQ86UW1 340 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 EHBP1Q8NDI1 1231 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 TRPM4Q8TD43 1214 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 ZNF592Q92610 1267 aa7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
CACNA1C-229ENST00000496818 ANP32CO43423 234 aa7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 WDR43Q15061 677 aaKnown RBP eCLIP7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 RALBP1Q15311 655 aa7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 KRT26Q7Z3Y9 468 aa7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 EMID1Q96A84 441 aaPredicted RBP7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 DCPSQ96C86 337 aaKnown RBP7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 CHPF2Q9P2E5 772 aa7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 CNOT7Q9UIV1 285 aaKnown RBP7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 NSFL1CQ9UNZ2 370 aaKnown RBP7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 DUOX1Q9NRD9 1551 aa7.41□□□□□ -1.22
CACNA1C-229ENST00000496818 YDJCA8MPS7 323 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 ECE2O60344 883 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 VARSP26640 1264 aaKnown RBP7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 TMPOP42166 694 aaKnown RBP7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 RPIAP49247 311 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 WNT7BP56706 349 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 DGKZQ13574 1117 aa7.4□□□□□ -1.22
CACNA1C-229ENST00000496818 KIF4BQ2VIQ3 1234 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms