RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 UBE3CQ15386 1083 aa13.37□□□□□ -0.27
KDM1A-205ENST00000494920 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
KDM1A-205ENST00000494920 SLC9C2Q5TAH2 1124 aa13.37□□□□□ -0.27
KDM1A-205ENST00000494920 CDC42EP5Q6NZY7 148 aa13.37□□□□□ -0.27
KDM1A-205ENST00000494920 TICAM2Q86XR7 235 aa13.37□□□□□ -0.27
KDM1A-205ENST00000494920 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
KDM1A-205ENST00000494920 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
KDM1A-205ENST00000494920 PAPPA2Q9BXP8 1791 aa13.37□□□□□ -0.27
KDM1A-205ENST00000494920 ZNF532Q9HCE3 1301 aa13.37□□□□□ -0.27
KDM1A-205ENST00000494920 SIPA1L1O43166 1804 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 CNTNAP1P78357 1384 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 WDHD1O75717 1129 aaPredicted RBP13.36□□□□□ -0.27
KDM1A-205ENST00000494920 ITGBL1O95965 494 aaPredicted RBP13.36□□□□□ -0.27
KDM1A-205ENST00000494920 LDHCP07864 332 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 CYP7A1P22680 504 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 ANGEL2Q5VTE6 544 aaKnown RBP13.36□□□□□ -0.27
KDM1A-205ENST00000494920 FKBP1CQ5VVH2 108 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 TDRD3Q9H7E2 651 aaKnown RBP13.36□□□□□ -0.27
KDM1A-205ENST00000494920 PASKQ96RG2 1323 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
KDM1A-205ENST00000494920 RPAP1Q9BWH6 1393 aaPredicted RBP13.35□□□□□ -0.27
KDM1A-205ENST00000494920 PCNTO95613 3336 aa13.35□□□□□ -0.27
KDM1A-205ENST00000494920 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
KDM1A-205ENST00000494920 RBM5P52756 815 aaKnown RBP eCLIP13.35□□□□□ -0.27
KDM1A-205ENST00000494920 NFIAQ12857 509 aa13.35□□□□□ -0.27
KDM1A-205ENST00000494920 MAP1SQ66K74 1059 aaPredicted RBP13.35□□□□□ -0.27
KDM1A-205ENST00000494920 IDI2Q9BXS1 227 aa13.35□□□□□ -0.27
KDM1A-205ENST00000494920 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
KDM1A-205ENST00000494920 FAM198AQ9UFP1 575 aa13.35□□□□□ -0.27
KDM1A-205ENST00000494920 SSC5DA1L4H1 1573 aa13.35□□□□□ -0.27
KDM1A-205ENST00000494920 COL2A1P02458 1487 aaPredicted RBP13.35□□□□□ -0.27
KDM1A-205ENST00000494920 RNF113AO15541 343 aaKnown RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 NPM3O75607 178 aaKnown RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 ZFYP08048 801 aaPredicted RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 SDSP20132 328 aa13.34□□□□□ -0.27
KDM1A-205ENST00000494920 DYNLL1P63167 89 aaKnown RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 ZMYM1Q5SVZ6 1142 aa13.34□□□□□ -0.27
KDM1A-205ENST00000494920 APOBEC3FQ8IUX4 373 aaKnown RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 CNTROBQ8N137 903 aa13.34□□□□□ -0.27
KDM1A-205ENST00000494920 OSBP2Q969R2 916 aa13.34□□□□□ -0.27
KDM1A-205ENST00000494920 TEPSINQ96N21 525 aa13.34□□□□□ -0.27
KDM1A-205ENST00000494920 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
KDM1A-205ENST00000494920 GLIS2Q9BZE0 524 aaPredicted RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 PUS7LQ9H0K6 701 aaKnown RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 DDX4Q9NQI0 724 aaKnown RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 AATFQ9NY61 560 aaKnown RBP eCLIP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 MYH1P12882 1939 aa13.34□□□□□ -0.27
KDM1A-205ENST00000494920 BAZ2AQ9UIF9 1905 aaKnown RBP13.34□□□□□ -0.27
KDM1A-205ENST00000494920 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.27
KDM1A-205ENST00000494920 ADM5C9JUS6 153 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 CACNB3P54284 484 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 DLK2Q6UY11 383 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 FAM83AQ86UY5 434 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 SMC1BQ8NDV3 1235 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 SH3RF3Q8TEJ3 882 aaPredicted RBP13.33□□□□□ -0.28
KDM1A-205ENST00000494920 APPBP2Q92624 585 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 USP40Q9NVE5 1235 aa13.33□□□□□ -0.28
KDM1A-205ENST00000494920 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
KDM1A-205ENST00000494920 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.28
KDM1A-205ENST00000494920 M0R2C6 588 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 MYO1BO43795 1136 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 RGS3P49796 1198 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 FSTL1Q12841 308 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 ZSCAN25Q6NSZ9 544 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 KRT26Q7Z3Y9 468 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 LCORLQ8N3X6 602 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
KDM1A-205ENST00000494920 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 GTF3C3Q9Y5Q9 886 aa13.32□□□□□ -0.28
KDM1A-205ENST00000494920 OTOFQ9HC10 1997 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 MAGEB6P1A0A0J9YX57 407 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 TRIM6-TRIM34B2RNG4 842 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 TRAF5O00463 557 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 FOXP2O15409 715 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 ENTPD3O75355 529 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 MBD4O95243 580 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 BAG3O95817 575 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 PLCG2P16885 1265 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.288e-8■■□□□ 13
KDM1A-205ENST00000494920 RASA3Q14644 834 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 SH3BP5LQ7L8J4 393 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 USP48Q86UV5 1035 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 ZFPM1Q8IX07 1006 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 DCPSQ96C86 337 aaKnown RBP13.31□□□□□ -0.28
KDM1A-205ENST00000494920 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 DEFB129Q9H1M3 183 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 IL25Q9H293 177 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 VEZTQ9HBM0 779 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 PPP2R3BQ9Y5P8 575 aa13.31□□□□□ -0.28
KDM1A-205ENST00000494920 TCP10L2B9ZVM9 353 aa13.3□□□□□ -0.28
KDM1A-205ENST00000494920 LRRFIP1Q32MZ4 808 aaKnown RBP13.3□□□□□ -0.28
KDM1A-205ENST00000494920 SULF1Q8IWU6 871 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms