RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 C11orf96Q7Z7L8 435 aa7.93□□□□□ -1.14
FNDC3B-212ENST00000494000 SP8Q8IXZ3 490 aa7.93□□□□□ -1.14
FNDC3B-212ENST00000494000 CHMP5Q9NZZ3 219 aa7.93□□□□□ -1.14
FNDC3B-212ENST00000494000 CYP46A1Q9Y6A2 500 aa7.93□□□□□ -1.14
FNDC3B-212ENST00000494000 CCDC194A0A1B0GVG4 234 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 HOXD11P31277 338 aaPredicted RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 PTH1RQ03431 593 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 DPH6Q7L8W6 267 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 ZNF513Q8N8E2 541 aaPredicted RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 EDC3Q96F86 508 aaKnown RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 MASTLQ96GX5 879 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 INTS4Q96HW7 963 aaKnown RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 ZSWIM6Q9HCJ5 1215 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 MAST3O60307 1309 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 SALL1Q9NSC2 1324 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 SLC27A2O14975 620 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 SCP2P22307 547 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 BDNFP23560 247 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 NT5C2P49902 561 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 RASGRF1Q13972 1273 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 SCARF1Q14162 830 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 ALX1Q15699 326 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 EZH2Q15910 746 aaKnown RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 SLC9C2Q5TAH2 1124 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 STYK1Q6J9G0 422 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 ZNF280DQ6N043 979 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 PRPF40BQ6NWY9 871 aaKnown RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 TTC30BQ8N4P2 665 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 FAM84BQ96KN1 310 aaPredicted RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 IL25Q9H293 177 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 SH2B1Q9NRF2 756 aaPredicted RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 ANKIB1Q9P2G1 1089 aa7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 G3BP2Q9UN86 482 aaKnown RBP7.92□□□□□ -1.14
FNDC3B-212ENST00000494000 MYH13Q9UKX3 1938 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 MMP10P09238 476 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 TCF3P15923 654 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 PDE6AP16499 860 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 BCAMP50895 628 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 WDR66Q8TBY9 1149 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 ANTXR1Q9H6X2 564 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 KLF15Q9UIH9 416 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 GGA1Q9UJY5 639 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 MAST2Q6P0Q8 1798 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 IDH1O75874 414 aaKnown RBP7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 HSPD1P10809 573 aaKnown RBP7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 EN1Q05925 392 aaPredicted RBP7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 IMMTQ16891 758 aaKnown RBP7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 BLOC1S2Q6QNY1 142 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 RUFY3Q7L099 469 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 ZNF589Q86UQ0 364 aaPredicted RBP7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 LRP2BPQ9P2M1 347 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 PALD1Q9ULE6 856 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 ATP6V0A2Q9Y487 856 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 ANKRD31Q8N7Z5 1873 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 KIAA1551Q9HCM1 1747 aa7.91□□□□□ -1.14
FNDC3B-212ENST00000494000 CCDC189A1A4V9 331 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 PPEF1O14829 653 aaPredicted RBP7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 FRAT2O75474 233 aaPredicted RBP7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 SRGNP10124 158 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 CNKSR1Q969H4 720 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 OSBP2Q969R2 916 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 AIDAQ96BJ3 306 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 NACAP1Q9BZK3 213 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 PIH1D3Q9NQM4 214 aaKnown RBP7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 LIMCH1Q9UPQ0 1083 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 WDR19Q8NEZ3 1342 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 ZNF532Q9HCE3 1301 aa7.9□□□□□ -1.14
FNDC3B-212ENST00000494000 TCRBV5S4A2TA0A5A2 114 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 H0YIN7 160 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 GPAA1O43292 621 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 CASTP20810 708 aaKnown RBP7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 GSTO1P78417 241 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 NUCB2P80303 420 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 CUL4AQ13619 759 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 JAKMIP1Q96N16 626 aaKnown RBP7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 TTC14Q96N46 770 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 EYA3Q99504 573 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 PDRG1Q9NUG6 133 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 NRBP1Q9UHY1 535 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 FAN1Q9Y2M0 1017 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 ZBTB12Q9Y330 459 aaPredicted RBP7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 NDUFB9Q9Y6M9 179 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 TAF1P21675 1872 aa7.9□□□□□ -1.15
FNDC3B-212ENST00000494000 IRS2Q9Y4H2 1338 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 CCDC88AQ3V6T2 1871 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 ZNF500O60304 480 aaPredicted RBP7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 LDHCP07864 332 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 SND1Q7KZF4 910 aaKnown RBP eCLIP7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 SLF2Q8IX21 1173 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 FBXL16Q8N461 479 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 TDRD7Q8NHU6 1098 aaKnown RBP7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 TBC1D22AQ8WUA7 517 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 NEK1Q96PY6 1258 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 RNF39Q9H2S5 420 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 PRR12Q9ULL5 1215 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 M0R2C6 588 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 GYG1P46976 350 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 SLC4A3P48751 1232 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms